Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_N13
         (878 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067796-1|AAH67796.1|  380|Homo sapiens chromosome 8 open readi...    31   7.3  
AK222660-1|BAD96380.1|  380|Homo sapiens hypothetical protein FL...    31   7.3  
AK027731-1|BAB55327.1|  380|Homo sapiens protein ( Homo sapiens ...    31   7.3  

>BC067796-1|AAH67796.1|  380|Homo sapiens chromosome 8 open reading
           frame 76 protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 12/51 (23%), Positives = 28/51 (54%)
 Frame = +3

Query: 285 PEQGHIAVIENNKXEYKVEDALRSVVIKDFDESILQKMSSNEIPPKSRDEI 437
           P+Q   A+  N + + ++ED ++    K+    ++ ++   +IP K +DE+
Sbjct: 280 PQQTSFALERNLRTQQEIEDKMKGFSFKEDTLLLIAEVMGEDIPEKIKDEV 330


>AK222660-1|BAD96380.1|  380|Homo sapiens hypothetical protein
           FLJ14825 variant protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 12/51 (23%), Positives = 28/51 (54%)
 Frame = +3

Query: 285 PEQGHIAVIENNKXEYKVEDALRSVVIKDFDESILQKMSSNEIPPKSRDEI 437
           P+Q   A+  N + + ++ED ++    K+    ++ ++   +IP K +DE+
Sbjct: 280 PQQTSFALERNLRTQQEIEDKMKGFSFKEDTLLLIAEVMGEDIPEKIKDEV 330


>AK027731-1|BAB55327.1|  380|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14825 fis, clone OVARC1000781. ).
          Length = 380

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 12/51 (23%), Positives = 28/51 (54%)
 Frame = +3

Query: 285 PEQGHIAVIENNKXEYKVEDALRSVVIKDFDESILQKMSSNEIPPKSRDEI 437
           P+Q   A+  N + + ++ED ++    K+    ++ ++   +IP K +DE+
Sbjct: 280 PQQTSFALERNLRTQQEIEDKMKGFSFKEDTLLLIAEVMGEDIPEKIKDEV 330


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,781,670
Number of Sequences: 237096
Number of extensions: 1172464
Number of successful extensions: 1587
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)