Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_N12
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 44 2e-04
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 42 8e-04
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 42 8e-04
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 37 0.016
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 36 0.050
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 36 0.050
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 31 1.1
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 31 1.4
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 5.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 5.7
Z71178-4|CAA94877.1| 390|Caenorhabditis elegans Hypothetical pr... 28 7.6
U88177-1|AAB42290.1| 220|Caenorhabditis elegans Hypothetical pr... 28 7.6
AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical... 28 7.6
AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical... 28 7.6
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Frame = +2
Query: 437 NYKEAYGYYPVTNECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDVQCTSGS 616
N E GY+ ++ C GI + CPDGL F Q DY +SG
Sbjct: 238 NCGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLESSGF 297
Query: 617 IKQYANPTAECP---HEYGFYPLKESNCSNYIM-CHEGKPTIMHCPYGLAFNFDKTAVTG 784
++ Y A P + G Y L +C+ ++ C G+ I CP L FN +
Sbjct: 298 MENYKASEALTPCTNMDNGLYAL---DCTPRVLSCQNGRENIFECPPSLVFNENSLICDY 354
Query: 785 PRT 793
P T
Sbjct: 355 PET 357
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 473 NEC-DTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDVQCTSGSIKQYANPTAEC 649
+EC + + C +GIA +++CP L F + C +P +V S ++ N C
Sbjct: 188 SECSNVFFSCSEGIAHRRNCPANLVFNPAIS----SCDWPKNVMDCSEKSEKPQN----C 239
Query: 650 PHEYGFYPLKESNCSNYIMCHEGKPTIMHCPYGLAFN 760
G++ + S++ C G P +M CP GL F+
Sbjct: 240 GEVDGYFSFGRCS-SSFSACTNGIPIVMFCPDGLMFS 275
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +2
Query: 455 GYYPVTNECDTYIECKQGIAVKQ-SCPDGLHFKSSTQWPDYPCAYPSDVQCTSGSIKQYA 631
G Y +C ++C G + SC L F T DYP Q SG + +
Sbjct: 1188 GLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYP-------QKVSGC-ENHG 1239
Query: 632 NPTAECPHEYGFYPLKESNCSNYIMCHEGKPTIMHCPYGLAFN 760
EC E+G + +NC + C G+ +M CP G FN
Sbjct: 1240 QTNGECS-EHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFN 1281
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 473 NECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDVQCTSGSIKQYANPT 640
N C+ + C G V +CP G F D+P A PS S S Y + T
Sbjct: 1256 NNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQASDSNSSYGSST 1311
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 488 YIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDV-QCTSGSIKQYANPTAECP 652
YI+C G A+ + C + L+F +TQ C Y +V +C GS ++P P
Sbjct: 708 YIQCSNGAAIVRRCGESLYFNEATQ----ECTYRDEVPEC--GSQGSTSSPVITTP 757
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Frame = +2
Query: 455 GYYPVTNECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDVQCTSGSIKQYAN 634
G+YP +N C ++ C + SCP GL + +S ++ A V T +
Sbjct: 487 GFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTRAPTTTTKS 546
Query: 635 ----------PTAECP----HEYGFYPLKESNCSNYIMCHEGKPTIMHCPYGLAFNFD 766
PT P + GF+ + S+C +I C G CP GL+F+ D
Sbjct: 547 APTVTTTTRAPTTTTPAFKCTKDGFFGV-PSDCLKFIRCVNGISYNFECPNGLSFHAD 603
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 455 GYYPVTNECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYP 577
G++ V ++C +I C GI+ CP+GL F + T D P
Sbjct: 570 GFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRP 610
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 41.5 bits (93), Expect = 8e-04
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +2
Query: 446 EAYGYYPVTNECDT-YIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDV-QCTSGSI 619
+A G +P C T ++ C GIA CP L F + C +P DV +C
Sbjct: 250 KADGIHP-NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVAECAGLPT 304
Query: 620 KQYANPTAECPHEYGFYPLKESNCSNYIMCHEGKPTIMHCPYGLAFN 760
Q PT E E G++ + + S++ C G+ +M CP GL F+
Sbjct: 305 PQ---PTCE---EDGYFSFGQCS-SSFTACTNGRAIVMFCPAGLKFS 344
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +2
Query: 446 EAYGYYPVTNECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDVQCTSG 613
E GY+ ++ C G A+ CP GL F ST DY + S+ Q TSG
Sbjct: 310 EEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYE-SNVSECQETSG 364
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 41.5 bits (93), Expect = 8e-04
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +2
Query: 446 EAYGYYPVTNECDT-YIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDV-QCTSGSI 619
+A G +P C T ++ C GIA CP L F + C +P DV +C
Sbjct: 250 KADGIHP-NGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVAECAGLPT 304
Query: 620 KQYANPTAECPHEYGFYPLKESNCSNYIMCHEGKPTIMHCPYGLAFN 760
Q PT E E G++ + + S++ C G+ +M CP GL F+
Sbjct: 305 PQ---PTCE---EDGYFSFGQCS-SSFTACTNGRAIVMFCPAGLKFS 344
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +2
Query: 446 EAYGYYPVTNECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDVQCTSG 613
E GY+ ++ C G A+ CP GL F ST DY + S+ Q TSG
Sbjct: 310 EEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYE-SNVSECQETSG 364
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 37.1 bits (82), Expect = 0.016
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = +2
Query: 488 YIECKQGIAVKQSCPDGLHF-----KSSTQWPDYPCAYPSDVQCTSGSIKQYANPTAECP 652
Y++C + +QSCP+GL+F + + ++ CA V +++Q A
Sbjct: 58 YLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTL---NVRQKAVSINCVG 114
Query: 653 HEYGFYPLKESNCS-NYIMCHEGKPTIMHCPY 745
G Y L ++ C+ NY C G + CPY
Sbjct: 115 RLSGDYALDKTVCNENYYQCANGISYMRKCPY 146
Score = 36.3 bits (80), Expect = 0.029
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Frame = +2
Query: 455 GYYPVTNECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDVQ-CTSGSIKQYA 631
G Y + Y++C QG ++ SC GL + CAY V C G
Sbjct: 895 GIYALPYCSQDYVQCMQGRSLISSCAPGLFYNEKNGM----CAYKHTVDTCKIGKGSDII 950
Query: 632 NPTAECPHEYGFYPLKESNCSN-YIMCHEGKPTIMHCPYGLAFN 760
+ A G+Y + CS+ Y C + + M CP L F+
Sbjct: 951 DSNACFGKSDGYY---SAGCSSYYFSCIDEQIRKMSCPNSLKFS 991
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 13/108 (12%)
Frame = +2
Query: 476 ECD-TYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAY-----PSDVQCTSGSIKQYANP 637
EC +++ C G+ C D L F + ++ P DV Y
Sbjct: 364 ECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEPRKPEDVPVLYNHGGAYNER 423
Query: 638 TAECPHEY-------GFYPLKESNCSNYIMCHEGKPTIMHCPYGLAFN 760
AE ++ G Y +KE+ ++ CH+G+ CP L FN
Sbjct: 424 PAEVKVDFDCTGKPNGKY-IKEACTKSFFTCHDGRAFANDCPGDLVFN 470
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 35.5 bits (78), Expect = 0.050
Identities = 23/85 (27%), Positives = 31/85 (36%)
Frame = +2
Query: 419 SEITMDNYKEAYGYYPVTNECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDV 598
S +T +A G+Y D Y C G + CP L F + DY P
Sbjct: 208 SAVTKSCVGKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVP--- 264
Query: 599 QCTSGSIKQYANPTAECPHEYGFYP 673
+CT+GS + P G P
Sbjct: 265 ECTNGSGNDEGSADETTPESSGEMP 289
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 35.5 bits (78), Expect = 0.050
Identities = 23/85 (27%), Positives = 31/85 (36%)
Frame = +2
Query: 419 SEITMDNYKEAYGYYPVTNECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYPSDV 598
S +T +A G+Y D Y C G + CP L F + DY P
Sbjct: 208 SAVTKSCVGKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVP--- 264
Query: 599 QCTSGSIKQYANPTAECPHEYGFYP 673
+CT+GS + P G P
Sbjct: 265 ECTNGSGNDEGSADETTPESSGEMP 289
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
E01G6.1 protein.
Length = 1391
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Frame = +2
Query: 404 NSAAISEITMDNYKEAY---GYYPVTNECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDY 574
N ++S +N K A G P + + EC V +CP G + S+
Sbjct: 767 NQGSVSNNNQNNNKGAVCANGETPFRGPDNKFQECN---FVHNTCPSGYQCEFSSTGQAV 823
Query: 575 PCAYPSDVQCTSG-SIKQYANPTAECPH-----EYGFYPLKESNCSNYIMCHEG 718
C + ++C SG S+ +Y CP G+ + +N +++ C G
Sbjct: 824 CCTNTNVIRCPSGSSVFEYGGRPLACPAGSNKCPQGYSCMPSTNPQHHLCCSSG 877
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 590 SDVQCTSGSIKQYANPTAECPHEYGFYPLKESNCSNYIMCHEGKPTIM-HCPYGLA 754
+D C +G N EC Y + C N H K T+ HCPYGL+
Sbjct: 28 TDDYCKNGG--SIVNGKCECTLRYEGPQCERERCLNGGRRHSAKGTVRCHCPYGLS 81
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Frame = +2
Query: 413 AISEITMDNYKEAYGYYPVT-NECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYP 589
A E+ +D + P T +EC ++ G CP G K + C
Sbjct: 12941 ATCEMVIDTNRPIATLPPATVDECPCKVKAHGG-----RCPKGYIAKDGQCYDIDECE-T 12994
Query: 590 SDVQCTSGSIKQYANPTAECPHEYGFYPLKESNCSN 697
++ QC+ G + + CPH PL NC N
Sbjct: 12995 NNGQCSEGCVNTPGSYYCACPHGMMRDPLDPFNCVN 13030
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Frame = +2
Query: 413 AISEITMDNYKEAYGYYPVT-NECDTYIECKQGIAVKQSCPDGLHFKSSTQWPDYPCAYP 589
A E+ +D + P T +EC ++ G CP G K + C
Sbjct: 12941 ATCEMVIDTNRPIATLPPATVDECPCKVKAHGG-----RCPKGYIAKDGQCYDIDECE-T 12994
Query: 590 SDVQCTSGSIKQYANPTAECPHEYGFYPLKESNCSN 697
++ QC+ G + + CPH PL NC N
Sbjct: 12995 NNGQCSEGCVNTPGSYYCACPHGMMRDPLDPFNCVN 13030
>Z71178-4|CAA94877.1| 390|Caenorhabditis elegans Hypothetical
protein B0024.4 protein.
Length = 390
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 255 RYILAQSRTVSRPITIDFLPGRRQPAVVISRTTPTNGI 368
+Y + Q P+T LPGR+ + I TT +N I
Sbjct: 336 QYYMIQGNQSINPVTTTMLPGRQTTSRGIETTTKSNAI 373
>U88177-1|AAB42290.1| 220|Caenorhabditis elegans Hypothetical
protein F53E10.4 protein.
Length = 220
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 769 NSCDWPENVPACNVDAFKNSRVNSPIMKSAI 861
N CDW V CNVD + VN + + +
Sbjct: 183 NCCDWNAGVYICNVDVAGSKAVNPACVNAGL 213
>AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical
protein Y105E8A.7b protein.
Length = 840
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +2
Query: 545 FKSSTQW---PDYPCAYPSDVQCTSGSIKQYANPTAECPHEYGFYPLKESNCSNYI 703
F SST + P YP YP D CT + Q ++ ++NC++Y+
Sbjct: 493 FTSSTGFFNSPRYPANYPLDTNCTYYIVGQPGKEILLHFEQFALSGNTDNNCNDYL 548
>AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical
protein Y105E8A.7a protein.
Length = 906
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +2
Query: 545 FKSSTQW---PDYPCAYPSDVQCTSGSIKQYANPTAECPHEYGFYPLKESNCSNYI 703
F SST + P YP YP D CT + Q ++ ++NC++Y+
Sbjct: 493 FTSSTGFFNSPRYPANYPLDTNCTYYIVGQPGKEILLHFEQFALSGNTDNNCNDYL 548
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,171,041
Number of Sequences: 27780
Number of extensions: 421095
Number of successful extensions: 1156
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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