Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_N12
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   3.7  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   6.4  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   6.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.4  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 371 INSICWCCPGYYNRR 327
           +  +C CCPG   RR
Sbjct: 402 VRILCACCPGRVRRR 416


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 374 LDSAFNDYLFNSAAISEITMDNYKEAY 454
           + S  N+Y +N+    ++  +NYK+ Y
Sbjct: 82  ISSLSNNYNYNNNNYKKLYCNNYKKLY 108


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 374 LDSAFNDYLFNSAAISEITMDNYKEAY 454
           + S  N+Y +N+    ++  +NYK+ Y
Sbjct: 82  ISSLSNNYNYNNNNYKKLYCNNYKKLY 108


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 42  PLRFDXVILYGELCSKLCQNSNSFLFLPLL 131
           PL+     L G   + +C  SN  LFL LL
Sbjct: 13  PLQCTSPFLGGPQLTDVCSASNGELFLALL 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,792
Number of Sequences: 438
Number of extensions: 5204
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)