BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_N09
(877 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2013|AAS65037.1| 518|Drosophila melanogaster CG7319-PC... 164 1e-40
AY069635-1|AAL39780.1| 330|Drosophila melanogaster LD40326p pro... 99 7e-21
AE014296-2014|AAF50022.2| 330|Drosophila melanogaster CG7319-PA... 99 7e-21
U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription ... 31 1.6
AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p pro... 31 1.6
AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA... 31 1.6
AY071408-1|AAL49030.1| 579|Drosophila melanogaster RE49422p pro... 31 2.1
AF373862-1|AAM21341.1| 579|Drosophila melanogaster Drm corazoni... 31 2.1
AE014296-2129|AAF49928.2| 579|Drosophila melanogaster CG10698-P... 31 2.1
AF522192-1|AAN10045.1| 579|Drosophila melanogaster putative cor... 30 3.6
BT011161-1|AAR82829.1| 876|Drosophila melanogaster AT20558p pro... 29 8.4
>AE014296-2013|AAS65037.1| 518|Drosophila melanogaster CG7319-PC,
isoform C protein.
Length = 518
Score = 164 bits (399), Expect = 1e-40
Identities = 83/177 (46%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Frame = +2
Query: 164 VMGDSAYKPKISGTQQDPVLKQAEIAYMKLIEERNRERVQKLQVISKRNRLTGFTIGAGV 343
+M S PKI + P L +A++ +MKLIEE+N +RVQKL+ I + N LT +G V
Sbjct: 104 IMSASEQGPKIKYGESAPKLDKAQLQFMKLIEEQNLDRVQKLKRIRRNNLLTAGALGVSV 163
Query: 344 LGVYLYSIFAIKQETFLERFRRAPENTAVIMAVAKTALQIRLPPLPSIKDVIKLYKLRAL 523
L +Y YSIF+++QE FL+ F + V ++ + RLPP+P+I++++KLY+L+A
Sbjct: 164 LAIYGYSIFSVQQEKFLDDFEEPKKMAQPSARVLQSGM--RLPPMPTIRELVKLYRLQAR 221
Query: 524 RELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGGITRSIIXQAPXKLVLXEK 691
++LSQNFLM+ RL DKIV+++G I V EVGPGPGGITRSI+ + P +L+L EK
Sbjct: 222 KQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITRSILRRHPQRLLLVEK 278
>AY069635-1|AAL39780.1| 330|Drosophila melanogaster LD40326p
protein.
Length = 330
Score = 99.1 bits (236), Expect = 7e-21
Identities = 45/78 (57%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = +2
Query: 461 IRLPPLPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGG 637
+RLPP+P+I++++KLY+L+A ++LSQNFLM+ RL DKIV+++G I V EVGPGPGG
Sbjct: 13 MRLPPMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGG 72
Query: 638 ITRSIIXQAPXKLVLXEK 691
ITRSI+ + P +L+L EK
Sbjct: 73 ITRSILRRHPQRLLLVEK 90
>AE014296-2014|AAF50022.2| 330|Drosophila melanogaster CG7319-PA,
isoform A protein.
Length = 330
Score = 99.1 bits (236), Expect = 7e-21
Identities = 45/78 (57%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = +2
Query: 461 IRLPPLPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGG 637
+RLPP+P+I++++KLY+L+A ++LSQNFLM+ RL DKIV+++G I V EVGPGPGG
Sbjct: 13 MRLPPMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGG 72
Query: 638 ITRSIIXQAPXKLVLXEK 691
ITRSI+ + P +L+L EK
Sbjct: 73 ITRSILRRHPQRLLLVEK 90
>U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription
initiation factorTFIID 85 kDa subunit protein.
Length = 704
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 473 PLPSIKDVIKLYKLRALRELSQNFLM 550
PLP +KD KL KL+ALRE S+ +
Sbjct: 335 PLPELKDSDKLLKLKALREASKRLAL 360
>AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p
protein.
Length = 704
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 473 PLPSIKDVIKLYKLRALRELSQNFLM 550
PLP +KD KL KL+ALRE S+ +
Sbjct: 335 PLPELKDSDKLLKLKALREASKRLAL 360
>AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA
protein.
Length = 704
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 473 PLPSIKDVIKLYKLRALRELSQNFLM 550
PLP +KD KL KL+ALRE S+ +
Sbjct: 335 PLPELKDSDKLLKLKALREASKRLAL 360
>AY071408-1|AAL49030.1| 579|Drosophila melanogaster RE49422p
protein.
Length = 579
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 211 RSSAQAGRNSLYEINRREKSRTRSKITSDFETQSTDGLHDRSRS 342
+SS G N+ Y +NR + RT S +T+ + T G + R+
Sbjct: 424 KSSGGGGNNNAYSLNRGDSQRTPSMLTAVTQVDGTGGSSRQMRA 467
>AF373862-1|AAM21341.1| 579|Drosophila melanogaster Drm corazonin
receptor protein.
Length = 579
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 211 RSSAQAGRNSLYEINRREKSRTRSKITSDFETQSTDGLHDRSRS 342
+SS G N+ Y +NR + RT S +T+ + T G + R+
Sbjct: 424 KSSGGGGNNNAYSLNRGDSQRTPSMLTAVTQVDGTGGSSRQMRA 467
>AE014296-2129|AAF49928.2| 579|Drosophila melanogaster CG10698-PA
protein.
Length = 579
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 211 RSSAQAGRNSLYEINRREKSRTRSKITSDFETQSTDGLHDRSRS 342
+SS G N+ Y +NR + RT S +T+ + T G + R+
Sbjct: 424 KSSGGGGNNNAYSLNRGDSQRTPSMLTAVTQVDGTGGSSRQMRA 467
>AF522192-1|AAN10045.1| 579|Drosophila melanogaster putative
corazonin receptor protein.
Length = 579
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 211 RSSAQAGRNSLYEINRREKSRTRSKITSDFETQSTDGLHDRSRS 342
+SS G N+ Y +NR + RT S +T+ + T G + R+
Sbjct: 424 KSSGGGGNNNAYSLNRGDSQRTPSILTAVTQVDGTGGSSRQMRA 467
>BT011161-1|AAR82829.1| 876|Drosophila melanogaster AT20558p
protein.
Length = 876
Score = 29.1 bits (62), Expect = 8.4
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 272 ERVQKLQVISKRNRLTGFTIG-AGVLGVYLYSIFAIKQETFLERFRRAPENTAVIM-AVA 445
E +K ++S ++ G+ + GV +YL+ + + FLE F + N V+M +A
Sbjct: 286 ESAKKYYLLSAKSAPEGYILPLVGVAQMYLHEGELNRSKAFLESFLTSEPNEPVVMDLLA 345
Query: 446 KTALQIRLP 472
K L+ + P
Sbjct: 346 KIYLEYKCP 354
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,332,935
Number of Sequences: 53049
Number of extensions: 635823
Number of successful extensions: 1350
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -