Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_N07
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0684 + 6009474-6009582,6009715-6009904,6011412-6011483,601...    30   2.1  
10_06_0046 - 10051197-10051610                                         29   6.5  
03_05_0713 - 27070063-27070126,27070202-27070290,27070369-270704...    29   6.5  
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565...    28   8.6  
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026...    28   8.6  

>08_01_0684 +
           6009474-6009582,6009715-6009904,6011412-6011483,
           6011644-6011715,6011806-6011877,6012163-6012234,
           6012283-6012354,6012479-6012550,6012634-6012705,
           6013112-6013183,6013275-6013349,6013453-6013524,
           6013619-6013684,6013752-6013777,6014179-6014558,
           6014642-6014840,6014910-6015068,6015569-6015613,
           6015742-6015973,6016053-6016203,6016306-6016665
          Length = 879

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 205 WPFTGGRTSFESTRVGTTAPPISAVKQ 125
           W F GG TS+ ++  G+T P +S  K+
Sbjct: 833 WQFRGGNTSYVTSHSGSTTPKLSRQKE 859


>10_06_0046 - 10051197-10051610
          Length = 137

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 551 LQGCTADGEGAQLKPEPQTGRPTP 622
           ++GCT +  G Q+ P P T  PTP
Sbjct: 21  VRGCTPNCSGEQVVPTPPTAVPTP 44


>03_05_0713 -
           27070063-27070126,27070202-27070290,27070369-27070428,
           27071110-27071215,27071309-27071428,27072340-27072476,
           27072561-27072647,27073660-27073956
          Length = 319

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 78  KYSYNGCPTLQTETHYCFTAEIGGAVVPTRVDSKEVLPP 194
           K +   CP  + E+    T +   AV P+ +D+KE++ P
Sbjct: 249 KGTLRNCPKAKVESSVVATEQSNAAVSPSGIDNKELVVP 287


>03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533,
            27456774-27456872,27456948-27457012,27457476-27457575,
            27458326-27458408,27458494-27458569,27458920-27459698
          Length = 1515

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
 Frame = +2

Query: 569  DGEGAQL--KPEPQTGRPTPRGTAQTRIF-----EVEPSTHGSR 679
            DG GA L  +P  Q    TPRGTA+ R+         P  HG+R
Sbjct: 1437 DGGGAGLLRQPRRQLAEGTPRGTARARVSPPTYRRPPPGPHGTR 1480


>02_04_0448 -
           23001579-23001683,23001783-23002382,23002479-23002628,
           23002788-23003015,23003188-23003302,23003392-23004659,
           23006621-23006692
          Length = 845

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 669 TGPDPXRRWSFNLGSPAPSSPTWVNKYAKGSSLYP 773
           T P P    +F    P PS   W    A+GS+ YP
Sbjct: 309 TPPTPPAAPAFRPAPPIPSLNDWSQPPARGSTFYP 343


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,335,458
Number of Sequences: 37544
Number of extensions: 461676
Number of successful extensions: 1141
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)