Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_N07
         (878 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13468-1|CAA73868.1|  114|Homo sapiens basic fibroblast growth f...    31   7.3  
S81809-1|AAB21432.2|  114|Homo sapiens basic fibroblast growth f...    31   7.3  
J04513-1|AAA52531.1|  210|Homo sapiens FGF2 protein.                   31   7.3  

>Y13468-1|CAA73868.1|  114|Homo sapiens basic fibroblast growth
           factor protein.
          Length = 114

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 22/59 (37%), Positives = 24/59 (40%)
 Frame = +2

Query: 533 RSRLCALQGCTADGEGAQLKPEPQTGRPTPRGTAQTRIFEVEPSTHGSRPXSTMVFQSG 709
           R R  AL G    G G    PE   GR   RGTA  R     P+  GSRP       +G
Sbjct: 4   RGRGRALPGGRLGGRGRGRAPERVGGRGRGRGTAAPR---AAPAARGSRPGPAGTMAAG 59


>S81809-1|AAB21432.2|  114|Homo sapiens basic fibroblast growth
           factor protein.
          Length = 114

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 22/59 (37%), Positives = 24/59 (40%)
 Frame = +2

Query: 533 RSRLCALQGCTADGEGAQLKPEPQTGRPTPRGTAQTRIFEVEPSTHGSRPXSTMVFQSG 709
           R R  AL G    G G    PE   GR   RGTA  R     P+  GSRP       +G
Sbjct: 4   RGRGRALPGGRLGGRGRGRAPERVGGRGRGRGTAAPR---AAPAARGSRPGPAGTMAAG 59


>J04513-1|AAA52531.1|  210|Homo sapiens FGF2 protein.
          Length = 210

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 22/59 (37%), Positives = 24/59 (40%)
 Frame = +2

Query: 533 RSRLCALQGCTADGEGAQLKPEPQTGRPTPRGTAQTRIFEVEPSTHGSRPXSTMVFQSG 709
           R R  AL G    G G    PE   GR   RGTA  R     P+  GSRP       +G
Sbjct: 4   RGRGRALPGGRLGGRGRGRAPERVGGRGRGRGTAAPR---AAPAARGSRPGPAGTMAAG 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,925,355
Number of Sequences: 237096
Number of extensions: 2614630
Number of successful extensions: 4470
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4470
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)