Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_N07
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13643-2|AAN65298.1|  354|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U13643-1|AAA21083.1|  427|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U13643-2|AAN65298.1|  354|Caenorhabditis elegans Hypothetical
           protein T07E3.4b protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -2

Query: 382 GEGRIQYFTQRGCSDLHIANK--IISTAIVDYTKTWF 278
           G+G +++F + G     I ++  + +  + DYTK WF
Sbjct: 219 GDGALRHFARLGAFPTMILDRCAVTTNTVCDYTKEWF 255


>U13643-1|AAA21083.1|  427|Caenorhabditis elegans Hypothetical
           protein T07E3.4a protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -2

Query: 382 GEGRIQYFTQRGCSDLHIANK--IISTAIVDYTKTWF 278
           G+G +++F + G     I ++  + +  + DYTK WF
Sbjct: 292 GDGALRHFARLGAFPTMILDRCAVTTNTVCDYTKEWF 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,322,605
Number of Sequences: 27780
Number of extensions: 374901
Number of successful extensions: 825
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)