Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_N05
(1149 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_1037 - 22477358-22478752 35 0.11
12_02_0299 - 17051570-17052474,17053542-17053755 34 0.24
11_06_0610 - 25449085-25453284 33 0.42
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.42
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 33 0.56
12_02_1174 - 26696869-26698191 31 1.7
12_01_0840 - 7847239-7847531,7847576-7847675,7848312-7848388,784... 31 1.7
09_02_0543 + 10427321-10428315,10428440-10429154 31 2.3
07_01_0479 + 3606663-3607448 31 2.3
10_08_0220 - 15977247-15977804 30 4.0
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 30 4.0
01_01_0570 - 4231100-4232560 30 4.0
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 29 6.9
08_01_0059 - 394001-394708 29 6.9
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 6.9
03_01_0023 + 198414-198968 29 6.9
02_05_1258 + 35290183-35290198,35290292-35290599,35290844-352909... 29 9.1
>10_08_1037 - 22477358-22478752
Length = 464
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 855 PXXVPLPAPGWLSPPWGLFXAXAXPPRGXXPWXAXLFXXPXPSXP-XPXSRPXXXXGXXG 1031
P P+P+PG L P G + PR P + F P P P P P G G
Sbjct: 368 PPPPPVPSPGILPSPSGFLNLLSPTPRSPYPLLSPGFQHPGPLTPNFPALSPLPGTGILG 427
Query: 1032 XXP 1040
P
Sbjct: 428 PGP 430
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 33.9 bits (74), Expect = 0.24
Identities = 29/101 (28%), Positives = 32/101 (31%)
Frame = +3
Query: 840 PPXRSPXXVPLPAPGWLSPPWGLFXAXAXPPRGXXPWXAXLFXXPXPSXPXPXSRPXXXX 1019
PP P P P P W PW A PP P +F P P P P + P
Sbjct: 252 PPSPPPPAFPFPLPPW---PW------APPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFP 302
Query: 1020 GXXGXXPPVTXXXXGXPXSQXXXSXVXXPXPLXXXAPPPTP 1142
PP+ P S P P PPP P
Sbjct: 303 ----QLPPL-------PHFPPLPSFYPSPPPPPPPPPPPPP 332
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.1 bits (72), Expect = 0.42
Identities = 25/92 (27%), Positives = 29/92 (31%)
Frame = +3
Query: 867 PLPAPGWLSPPWGLFXAXAXPPRGXXPWXAXLFXXPXPSXPXPXSRPXXXXGXXGXXPPV 1046
P P+ GWL P A PP+ P P S P P PPV
Sbjct: 512 PPPSSGWL--PKSPERKKAPPPQAEPPTEYSPPATPESSPPPEGKSPPTPTASHSP-PPV 568
Query: 1047 TXXXXGXPXSQXXXSXVXXPXPLXXXAPPPTP 1142
P + P P +PPPTP
Sbjct: 569 PEGHTPSPPKSGPPAGESPPTPESKASPPPTP 600
Score = 29.5 bits (63), Expect = 5.2
Identities = 28/102 (27%), Positives = 31/102 (30%), Gaps = 3/102 (2%)
Frame = +3
Query: 840 PPXRSPXX---VPLPAPGWLSPPWGLFXAXAXPPRGXXPWXAXLFXXPXPSXPXPXSRPX 1010
PP +SP V LP P SPP PP P A + P P P P
Sbjct: 1147 PPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPV 1206
Query: 1011 XXXGXXGXXPPVTXXXXGXPXSQXXXSXVXXPXPLXXXAPPP 1136
PPV P P P +PPP
Sbjct: 1207 I-----SPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPP 1243
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.1 bits (72), Expect = 0.42
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Frame = +2
Query: 965 PXPPPLXXRALXPAXSPXRXXRGXSPRXXXXXGXSPXPKXPVXG---XXPXXSXAXXAPP 1135
P PPP+ PA P RG +P G +P P P P APP
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPP 1208
Query: 1136 NPXG 1147
P G
Sbjct: 1209 MPPG 1212
Score = 28.7 bits (61), Expect = 9.1
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = +3
Query: 972 PXPSXPXPXSRPXXXXGXXGXXPPVTXXXXGXPXSQXXXSXVXXPXPLXXXAPPPTP 1142
P P P P R G G PP+ P + P + APPP P
Sbjct: 1060 PSPPSPPPPQRENTSVGIQGGIPPLPPP---LPPTLGDYGVAPPPPSIGAGAPPPPP 1113
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 32.7 bits (71), Expect = 0.56
Identities = 33/114 (28%), Positives = 35/114 (30%), Gaps = 1/114 (0%)
Frame = -2
Query: 1142 GGWGGRXXXXRXGVXDRXXXXLGXGXPLXPXGXGGXXPXXXXXXXXPGXGXGXRGXGXXE 963
GG GGR G G G G GG G RG G
Sbjct: 38 GGVGGRGGRGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGGGGGGGYESGGGRGYGGGG 97
Query: 962 KX-SXPXXXPPGGXGXGXE*SPGGG*PXXCREGDXXXXSXRGGGGARXXXPTXA 804
+ PGG G G E GGG R G+ RG GGA P A
Sbjct: 98 RGYESGGGRGPGGGGRGHESGGGGG-----RGGNVWAQPGRGRGGAPAPAPAPA 146
Score = 29.5 bits (63), Expect = 5.2
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 5/66 (7%)
Frame = -3
Query: 1006 GRXXGXGXEGXGXXKRXAXXGXXPRGGXAX-AXNSPQGGDSX----PGAGRGTXXGDLXG 842
GR G G G G R G GG P GG PG GRG G G
Sbjct: 13 GRGRGGGRGGGGGDGRGGGYGGAGGGGVGGRGGRGPPGGGGGRGYEPGGGRGYGGGGGGG 72
Query: 841 GXAXQG 824
G G
Sbjct: 73 GRGYGG 78
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.1 bits (67), Expect = 1.7
Identities = 27/101 (26%), Positives = 28/101 (27%)
Frame = +3
Query: 840 PPXRSPXXVPLPAPGWLSPPWGLFXAXAXPPRGXXPWXAXLFXXPXPSXPXPXSRPXXXX 1019
PP R P P P P PP P P P PS P P
Sbjct: 137 PPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPT 196
Query: 1020 GXXGXXPPVTXXXXGXPXSQXXXSXVXXPXPLXXXAPPPTP 1142
PPV P + S P P PP TP
Sbjct: 197 RPPSVKPPVVQPKPQPPPTLPPPS----PPPPPPTVPPRTP 233
Score = 30.3 bits (65), Expect = 3.0
Identities = 27/108 (25%), Positives = 32/108 (29%), Gaps = 2/108 (1%)
Frame = +3
Query: 825 PCXAXPPXRSPXXVPLPAPG-WLSPPWGLFXAXAXPPRGXXPWXAXLFXXPXPSXPXPXS 1001
P P + P P P P L PP PPR A + P P P P +
Sbjct: 194 PPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRA 253
Query: 1002 RPXXXXGXXGXX-PPVTXXXXGXPXSQXXXSXVXXPXPLXXXAPPPTP 1142
PP P + V P P PPP+P
Sbjct: 254 PVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSP 301
>12_01_0840 - 7847239-7847531,7847576-7847675,7848312-7848388,
7848486-7848738
Length = 240
Score = 31.1 bits (67), Expect = 1.7
Identities = 29/101 (28%), Positives = 35/101 (34%)
Frame = -3
Query: 1141 GVGGGAXXXRGXGXXTXDXXFWXWGXPXXXXVTGGXXPXXPXXXXGRXXGXGXEGXGXXK 962
G GGG +G G + + G V GG G G G +G G
Sbjct: 148 GGGGGGGGGQGGGNGSGYGSGYGSGYGQGGGVCGGSY----GQGGGGGGGGGGQGGGAHA 203
Query: 961 RXAXXGXXPRGGXAXAXNSPQGGDSXPGAGRGTXXGDLXGG 839
R G GG QGG S G+G G+ G GG
Sbjct: 204 RGYGQGGGGGGGGG------QGGGSSSGSGYGSGYGGGAGG 238
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 30.7 bits (66), Expect = 2.3
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 5/61 (8%)
Frame = +3
Query: 840 PPXRSPXXVPLPAPGW-LSPPWGLFXAXAXPPRGXX----PWXAXLFXXPXPSXPXPXSR 1004
PP +P P P P ++PP G A A P PW A P P P P
Sbjct: 47 PPTPAPQSSPAPPPAPDMTPPPGPGPAAAPSPHSPSPSNAPWVAPAADIPPPPPPPPNPL 106
Query: 1005 P 1007
P
Sbjct: 107 P 107
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.7 bits (66), Expect = 2.3
Identities = 26/107 (24%), Positives = 32/107 (29%), Gaps = 1/107 (0%)
Frame = +3
Query: 825 PCXAXPPXRSPXXVPLPAPGWLSPPWGLFXAXAXPPRGXXPWXAXLFXXP-XPSXPXPXS 1001
P + PP + P+ P + PP G PP+ P+ P P P P
Sbjct: 146 PQISRPPMPNLSAPPVAYPQVVRPPPGQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPPP 205
Query: 1002 RPXXXXGXXGXXPPVTXXXXGXPXSQXXXSXVXXPXPLXXXAPPPTP 1142
P P V G P P P PPP P
Sbjct: 206 GPFMRGPPPMGPPQVRPGMPGGPPPGMRPG--MPPPPFRPGMPPPPP 250
>10_08_0220 - 15977247-15977804
Length = 185
Score = 29.9 bits (64), Expect = 4.0
Identities = 24/104 (23%), Positives = 27/104 (25%), Gaps = 1/104 (0%)
Frame = -3
Query: 1132 GGAXXXRGXGXXTXDXXFWXWGXPXXXXVTGGXXPXXPXXXXGRXXGXGXEGXGXXKRXA 953
GG G G + W G GG G G G G +
Sbjct: 30 GGGGSGEGGGGGSDGGSGWGSGSGSGYGQAGGDGSYASGGGEGGGGGGGENGGSGYGSGS 89
Query: 952 XXGXXPRGGXA-XAXNSPQGGDSXPGAGRGTXXGDLXGGXAXQG 824
G GG QGG G G G G G + G
Sbjct: 90 GSGYGQAGGSGPYGGGYAQGGGGGQGGGGGQNGGSGYGSGSGSG 133
>07_03_0329 + 16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 29.9 bits (64), Expect = 4.0
Identities = 31/105 (29%), Positives = 32/105 (30%)
Frame = -2
Query: 1145 RGGWGGRXXXXRXGVXDRXXXXLGXGXPLXPXGXGGXXPXXXXXXXXPGXGXGXRGXGXX 966
RGG GGR R G G P G GG P G G G G
Sbjct: 24 RGGGGGRGRG-RDGAPYSGGRGRGQDGSY-PGGRGGGYGGGGGGGGPPYYGGGGGGGGGG 81
Query: 965 EKXSXPXXXPPGGXGXGXE*SPGGG*PXXCREGDXXXXSXRGGGG 831
GG G G + GG GD RGGGG
Sbjct: 82 GGQGR-GYYDDGGDGRGYQRGMEGGGGRGGYRGDGDGGYGRGGGG 125
>01_01_0570 - 4231100-4232560
Length = 486
Score = 29.9 bits (64), Expect = 4.0
Identities = 30/111 (27%), Positives = 32/111 (28%)
Frame = -3
Query: 1141 GVGGGAXXXRGXGXXTXDXXFWXWGXPXXXXVTGGXXPXXPXXXXGRXXGXGXEGXGXXK 962
G GGGA G G G +GG G G G G G
Sbjct: 329 GFGGGAGIGEGVGNGFGVGAGAGTGLGSGFGWSGGAGGGF-GTGGGSGFGGGLGGGGGIG 387
Query: 961 RXAXXGXXPRGGXAXAXNSPQGGDSXPGAGRGTXXGDLXGGXAXQGXXXXR 809
G GG + GG GAG G G GG A G R
Sbjct: 388 GGLGVGGGTGGGSGANEGAGMGGGISSGAGAGGGLGVGGGGGAGGGIGASR 438
>12_02_0118 - 13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +3
Query: 855 PXXVPLPAP-GWLSPPWGLFXAXAXP-PRGXXPWXAXLFXXPXPSXPXPXSRPXXXXGXX 1028
P P PAP G L P+G A + P G P P + P S+P G
Sbjct: 210 PGAAPQPAPTGGLRTPYGGPPAPSQQVPFGGAPQWPGTQPPPFGAQAAPSSQPPPFMGVP 269
Query: 1029 GXXPP 1043
G PP
Sbjct: 270 GNAPP 274
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = +2
Query: 944 PXXGSPFPX-PPPLXXRALXPAXSPXRXXRGXSPRXXXXXGXSPXPKXPVXGXXPXXSXA 1120
P P P PPP RA P P R +PR P P P+ P S
Sbjct: 7 PRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPY----APPPPSHPLAPPPPHISPP 62
Query: 1121 XXAPPNP 1141
PP P
Sbjct: 63 APVPPPP 69
>05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +3
Query: 972 PXPSXPXPXSRPXXXXGXXGXXPPVTXXXXGXPXSQXXXSXVXXPXPLXXXAPPPTP 1142
P P P P RP PP P + + P APPPTP
Sbjct: 70 PTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPPPPAPAPPPTP 126
>03_01_0023 + 198414-198968
Length = 184
Score = 29.1 bits (62), Expect = 6.9
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -2
Query: 1001 GXGXGXRGXGXXEKXSXPXXXPPGGXGXGXE*SPGGG*PXXCREGDXXXXSXRGGGGARX 822
G G G RG G GG G G S GGG G S GGGG R
Sbjct: 46 GGGGGGRGGGGGSGGGSGGGGGSGGGGSGGGGSGGGG-----SGGGGGGGSGGGGGGGRC 100
Query: 821 XXPT 810
T
Sbjct: 101 PIDT 104
>02_05_1258 + 35290183-35290198,35290292-35290599,35290844-35290939,
35291067-35291144,35291224-35291400,35292738-35292806,
35292917-35293093
Length = 306
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = -3
Query: 1006 GRXXGXGXEGXGXXKRXAXXGXXPRGGXAXAXNS-PQGGDSXP---GAGRGTXXGDLXGG 839
GR G G G G + RGG + +GG P G GRG G + GG
Sbjct: 6 GRGFGRGGRGDGGGRSGGGGRGFGRGGDSGGRGGRGRGGGRTPRGRGGGRGGGRGGMKGG 65
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,524,816
Number of Sequences: 37544
Number of extensions: 306836
Number of successful extensions: 1082
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3491481604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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