Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_N05
(1149 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 33 0.50
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 33 0.50
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.66
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.66
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.66
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.88
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 2.0
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 2.0
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 3.5
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.7
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical protein
B0035.1b protein.
Length = 341
Score = 32.7 bits (71), Expect = 0.50
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Frame = +3
Query: 825 PCXAXPPXRSPXXVPLPAPGWLSPPWGLFXAXAXPPRGXXPWXAXLFXXPXPSXP--XPX 998
P + PP S P P + PP G+ A PPRG P A P P P P
Sbjct: 128 PMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYP-PPRGYPPAPAPGVYMPPPGMPGAYPP 186
Query: 999 SRPXXXXGXXGXXP 1040
R G G P
Sbjct: 187 PRMPIGHGPPGGPP 200
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical protein
B0035.1a protein.
Length = 298
Score = 32.7 bits (71), Expect = 0.50
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Frame = +3
Query: 825 PCXAXPPXRSPXXVPLPAPGWLSPPWGLFXAXAXPPRGXXPWXAXLFXXPXPSXP--XPX 998
P + PP S P P + PP G+ A PPRG P A P P P P
Sbjct: 128 PMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYP-PPRGYPPAPAPGVYMPPPGMPGAYPP 186
Query: 999 SRPXXXXGXXGXXP 1040
R G G P
Sbjct: 187 PRMPIGHGPPGGPP 200
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.66
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +2
Query: 944 PXXGSPFPXPPPLXXRALXPAXSPXRXXRGXSPRXXXXXGXSP----XPKXPVXGXXPXX 1111
P GSP P PPP L + SP SP P P P G P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 1112 SXAXXAPPNP 1141
A PP P
Sbjct: 292 PRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.66
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +2
Query: 944 PXXGSPFPXPPPLXXRALXPAXSPXRXXRGXSPRXXXXXGXSP----XPKXPVXGXXPXX 1111
P GSP P PPP L + SP SP P P P G P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 1112 SXAXXAPPNP 1141
A PP P
Sbjct: 313 PRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.66
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +2
Query: 944 PXXGSPFPXPPPLXXRALXPAXSPXRXXRGXSPRXXXXXGXSP----XPKXPVXGXXPXX 1111
P GSP P PPP L + SP SP P P P G P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 1112 SXAXXAPPNP 1141
A PP P
Sbjct: 298 PRAGSPPPPP 307
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.88
Identities = 31/127 (24%), Positives = 36/127 (28%), Gaps = 1/127 (0%)
Frame = +1
Query: 772 PPKXQKXADMPAXVGXXXLAPPPPLXDXXXXSPSRHXXXXXXXXXXXXXXXXPPGGXXXG 951
PP + D+ A G PPPP P PP G
Sbjct: 76 PPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 135
Query: 952 XLXFSXXPXPLX-PXPXPGXXXXSXXXGXFPPXPXGXRGLPXPKXXXXRSXTPXLXCXXR 1128
S P P P G S PP P G P P + + R
Sbjct: 136 ----SPPPPPTGEPQDLSGEGNASRRP---PPPPKGTGSPPPPPTGEPQDLSTEGNASRR 188
Query: 1129 PPQPPRG 1149
PP PP+G
Sbjct: 189 PPPPPKG 195
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Frame = +3
Query: 840 PPXRSPXXVPLPAPGWLSPPWGLFXAXAXPP---RGXXPWXAXLFXXPXPSXP 989
PP + P P PG + PP +F PP G P +F P P P
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 4/76 (5%)
Frame = +3
Query: 927 PPRGXXPWXAXLFXXPXPSX----PXPXSRPXXXXGXXGXXPPVTXXXXGXPXSQXXXSX 1094
PP G P + P PS P P G G PP G P
Sbjct: 47 PPSGILPPGQSI---PKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
Query: 1095 VXXPXPLXXXAPPPTP 1142
+ P P+ PPP P
Sbjct: 104 IPPPPPMFGAPPPPPP 119
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.5
Identities = 28/101 (27%), Positives = 31/101 (30%)
Frame = -2
Query: 1049 GXGGXXPXXXXXXXXPGXGXGXRGXGXXEKXSXPXXXPPGGXGXGXE*SPGGG*PXXCRE 870
G GG P G G G G P GG G G S GGG
Sbjct: 170 GCGGGSSGGGGYAVAPSGGGGC-GGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPS 228
Query: 869 GDXXXXSXRGGGGARXXXPTXAGMSAXFWXFGGXLXTGYSS 747
G + GGG G S + GG GYS+
Sbjct: 229 GGGGYATSGGGGSGGY---ATGGSSGGGYSSGGSSGGGYST 266
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -2
Query: 1049 GXGGXXPXXXXXXXXPGXGXGXRGXGXXEKXSXPXXXPPGGXGXGXE*SPGGG*PXXCRE 870
G GG G G G G G GG G G GGG C
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGG 157
Query: 869 GDXXXXSXRGGGG 831
G GGGG
Sbjct: 158 GGGGGCGGGGGGG 170
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.5
Identities = 28/101 (27%), Positives = 31/101 (30%)
Frame = -2
Query: 1049 GXGGXXPXXXXXXXXPGXGXGXRGXGXXEKXSXPXXXPPGGXGXGXE*SPGGG*PXXCRE 870
G GG P G G G G P GG G G S GGG
Sbjct: 170 GCGGGSSGGGGYAVAPSGGGGC-GGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPS 228
Query: 869 GDXXXXSXRGGGGARXXXPTXAGMSAXFWXFGGXLXTGYSS 747
G + GGG G S + GG GYS+
Sbjct: 229 GGGGYATSGGGGSGGY---ATGGSSGGGYSSGGSSGGGYST 266
Score = 28.7 bits (61), Expect = 8.2
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -2
Query: 1049 GXGGXXPXXXXXXXXPGXGXGXRGXGXXEKXSXPXXXPPGGXGXGXE*SPGGG*PXXCRE 870
G GG G G G G G GG G G GGG C
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGG 157
Query: 869 GDXXXXSXRGGGG 831
G GGGG
Sbjct: 158 GGGGGCGGGGGGG 170
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -2
Query: 1076 GXGXPLXPXGXGGXXPXXXXXXXXPGXGXGXRGXGXXEKXSXPXXXPPGGXGXGXE*SPG 897
G G P P G G P PG G G G PPG G G PG
Sbjct: 160 GGGDPRGPPGGMGGPPGHGGMGGPPGHG----GQGGPPGHGGMGGPPPGQGGPGGPGGPG 215
Query: 896 G 894
G
Sbjct: 216 G 216
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -2
Query: 1076 GXGXPLXPXGXGGXXPXXXXXXXXPGXGXGXRGXGXXEKXSXPXXXPPGGXGXGXE*SPG 897
G G P P G G P PG G G G PPG G G PG
Sbjct: 440 GGGDPRGPPGGMGGPPGHGGMGGPPGHG----GQGGPPGHGGMGGPPPGQGGPGGPGGPG 495
Query: 896 G 894
G
Sbjct: 496 G 496
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 2.7
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = -2
Query: 1049 GXGGXXPXXXXXXXXPGXGXGXRGXGXXEKXSXPXXXPPGGXGXGXE*SPGGG*PXXCRE 870
G GG P G G G RG G GG G G GGG R
Sbjct: 47 GWGGGGPGWGRGGGGSGWGGG-RGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRG 105
Query: 869 GDXXXXSXRGGGG 831
G GGGG
Sbjct: 106 GGGGGRGGGGGGG 118
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = -3
Query: 1006 GRXXGXGXEGXGXXKRXAXXGXXPRGGXAXAXNSPQGGDSXPGAGRGTXXGDLXGGXAXQ 827
G G G G G R G GG +GG G GRG G GG +
Sbjct: 79 GNWGGNGGGGNGGGGRGGGGGG---GGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGR 135
Query: 826 G 824
G
Sbjct: 136 G 136
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.7
Identities = 30/119 (25%), Positives = 32/119 (26%), Gaps = 4/119 (3%)
Frame = -3
Query: 1147 PXGVGGGAXXXRGXGXXTXDXXFWXWGXPXXXXVTGGXXPXXPXXXXGRXXGXGXEGXGX 968
P G GGG G G G GG G G G G
Sbjct: 318 PAGGGGGGDFPAGGGGGGYSTG-GGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGG 376
Query: 967 XKRXAXXGXXPRGGXAX----AXNSPQGGDSXPGAGRGTXXGDLXGGXAXQGXXXXRXQ 803
G P+ A A +P GG G G G G G A G R Q
Sbjct: 377 YNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGGAGGGGGYAGGAGAGSYRRRFQ 435
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 3.5
Identities = 30/107 (28%), Positives = 32/107 (29%), Gaps = 1/107 (0%)
Frame = +3
Query: 825 PCXAXPPXRSPXX-VPLPAPGWLSPPWGLFXAXAXPPRGXXPWXAXLFXXPXPSXPXPXS 1001
P A P P VP+PAP P A A PP P A P P P
Sbjct: 78 PAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPP-APYPQHAVPAPAPYQQQPPPPP 136
Query: 1002 RPXXXXGXXGXXPPVTXXXXGXPXSQXXXSXVXXPXPLXXXAPPPTP 1142
P PP P S P + APPP P
Sbjct: 137 PPPHYPPPPPHYPPPPPA----PHSAYIDHSAPRPAYIEHSAPPPQP 179
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical protein
T01C3.7 protein.
Length = 352
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -3
Query: 1006 GRXXGXGXEGXGXXKRXAXXGXX-PRGGXAXAXNSPQGGDSXPGAGRGTXXGDLXGG 839
G G G G R G PRGG SP+GG P GRG G + GG
Sbjct: 60 GGDRGGFRGGRGGGDRGGFGGRGSPRGGFG-GRGSPRGGRGSPRGGRG-GAGGMRGG 114
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 934 RGGXAXAXNSPQGGDSXPGAGRGTXXGDLXGGXAXQG 824
+GG QGG+ G GRG G GG QG
Sbjct: 179 QGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQG 215
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 988 PXPXPGXXXXSXXXGXFPPXPXGXRGLPXPKXXXXRSXTPXLXCXXRPPQPPRG 1149
P P P G PP P G GLP P C PP PP G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 988 PXPXPGXXXXSXXXGXFPPXPXGXRGLPXPKXXXXRSXTPXLXCXXRPPQPPRG 1149
P P P G PP P G GLP P C PP PP G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 988 PXPXPGXXXXSXXXGXFPPXPXGXRGLPXPKXXXXRSXTPXLXCXXRPPQPPRG 1149
P P P G PP P G GLP P C PP PP G
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,824,099
Number of Sequences: 27780
Number of extensions: 181706
Number of successful extensions: 595
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3119902942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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