Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_N03
         (878 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14396-1|CAA32569.1|  281|Drosophila melanogaster sodium channel...    31   2.8  
AE013599-3978|AAM70798.1| 1618|Drosophila melanogaster CG9071-PA...    31   2.8  
AE013599-3977|AAF47291.4| 2327|Drosophila melanogaster CG9071-PB...    31   2.8  
BT001630-1|AAN71385.1|  642|Drosophila melanogaster RE38276p pro...    29   6.4  
AE014297-2311|AAF55388.1|  642|Drosophila melanogaster CG5169-PA...    29   6.4  

>X14396-1|CAA32569.1|  281|Drosophila melanogaster sodium channel
           protein protein.
          Length = 281

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 156 LFFSKYYTQFWKDTELLSTF*SILFH*VRAKQQLKQLSNLK 34
           L FSKY+T FW   + +  F S+    +   + LK L +L+
Sbjct: 72  LGFSKYFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLR 112


>AE013599-3978|AAM70798.1| 1618|Drosophila melanogaster CG9071-PA,
            isoform A protein.
          Length = 1618

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 156  LFFSKYYTQFWKDTELLSTF*SILFH*VRAKQQLKQLSNLK 34
            L FSKY+T FW   + +  F S+    +   + LK L +L+
Sbjct: 956  LGFSKYFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLR 996


>AE013599-3977|AAF47291.4| 2327|Drosophila melanogaster CG9071-PB,
            isoform B protein.
          Length = 2327

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 156  LFFSKYYTQFWKDTELLSTF*SILFH*VRAKQQLKQLSNLK 34
            L FSKY+T FW   + +  F S+    +   + LK L +L+
Sbjct: 1665 LGFSKYFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLR 1705


>BT001630-1|AAN71385.1|  642|Drosophila melanogaster RE38276p
           protein.
          Length = 642

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 315 AVLAQPVQSTSLPSLSVLTFPSQSRTAIGEHFHLFHYTFLFSCSLSSYAH 166
           A L  P+QS S+P+ S      Q R++  E FH  +   + SCS SS  H
Sbjct: 476 ASLGLPLQS-SVPTPSTAEQQQQRRSSQRESFHANNAALVASCSSSSNNH 524


>AE014297-2311|AAF55388.1|  642|Drosophila melanogaster CG5169-PA
           protein.
          Length = 642

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 315 AVLAQPVQSTSLPSLSVLTFPSQSRTAIGEHFHLFHYTFLFSCSLSSYAH 166
           A L  P+QS S+P+ S      Q R++  E FH  +   + SCS SS  H
Sbjct: 476 ASLGLPLQS-SVPTPSTAEQQQQRRSSQRESFHANNAALVASCSSSSNNH 524


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,446,688
Number of Sequences: 53049
Number of extensions: 600987
Number of successful extensions: 1248
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)