Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_N02
(899 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 159 4e-40
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 159 4e-40
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 120 2e-28
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 68 2e-12
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 56 9e-09
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 52 8e-08
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 49 8e-07
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 31 0.22
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 28 1.6
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 2.1
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 2.1
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 27 2.7
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 3.6
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 26 6.3
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 26 8.4
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 159 bits (387), Expect = 4e-40
Identities = 83/136 (61%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Frame = +2
Query: 224 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 403
KSTLTDSLV KAGII+ A+AG+ RF DTR DEQ+R +TIKSTAIS+F E+ + D+
Sbjct: 32 KSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFAEMTDDDM----- 86
Query: 404 PDQREKSE-KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 580
D +E ++ FL+NLIDSPGHVDFSSEVTAALRVTDGAL QTETVLRQA
Sbjct: 87 KDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQA 146
Query: 581 IAERIKPILFMXKMDR 628
+ ERI+P++ + K+DR
Sbjct: 147 LGERIRPVVVVNKVDR 162
Score = 50.0 bits (114), Expect = 5e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 130 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGQ 225
MV FT +E+R +M K N+RNMSVIAHVDHG+
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGK 32
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 159 bits (387), Expect = 4e-40
Identities = 83/136 (61%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Frame = +2
Query: 224 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 403
KSTLTDSLV KAGII+ A+AG+ RF DTR DEQ+R +TIKSTAIS+F E+ + D+
Sbjct: 32 KSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFAEMTDDDM----- 86
Query: 404 PDQREKSE-KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 580
D +E ++ FL+NLIDSPGHVDFSSEVTAALRVTDGAL QTETVLRQA
Sbjct: 87 KDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQA 146
Query: 581 IAERIKPILFMXKMDR 628
+ ERI+P++ + K+DR
Sbjct: 147 LGERIRPVVVVNKVDR 162
Score = 50.0 bits (114), Expect = 5e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 130 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGQ 225
MV FT +E+R +M K N+RNMSVIAHVDHG+
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGK 32
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 120 bits (290), Expect = 2e-28
Identities = 70/135 (51%), Positives = 90/135 (66%)
Frame = +2
Query: 224 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 403
K+TL DSL++ GII+ AG RF D R+DE R IT+KS+AIS+FF++ I+
Sbjct: 32 KTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISLFFKV-------ISQ 84
Query: 404 PDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 583
D++ + EK +LINLIDSPGHVDFSSEV++A R+ DGA QT TVLRQA
Sbjct: 85 NDEK-RVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQAW 143
Query: 584 AERIKPILFMXKMDR 628
+RIK IL + KMDR
Sbjct: 144 IDRIKVILVINKMDR 158
Score = 30.7 bits (66), Expect = 0.29
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 148 DEIRGMMDKKRNIRNMSVIAHVDHGQ 225
+++ + + NIRN +++AHVDHG+
Sbjct: 7 EKLVSLQKNQENIRNFTLLAHVDHGK 32
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 68.1 bits (159), Expect = 2e-12
Identities = 41/104 (39%), Positives = 56/104 (53%)
Frame = +2
Query: 317 EQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAA 496
E+++ ITI+S A +E + N Q+ EK + IN+ID+PGH+DF+ EV A
Sbjct: 108 EREKGITIQSAATHCTWERTVDQIE--ANEKQKTDFEKSYNINIIDTPGHIDFTIEVERA 165
Query: 497 LRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMXKMDR 628
LRV DGA+ QT TV RQ + I F+ KMDR
Sbjct: 166 LRVLDGAVLVLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDR 209
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 136 NFTVDEIRGMMDKKR--NIRNMSVIAHVDHGQ 225
N + E DKKR IRN+ + AH+D G+
Sbjct: 41 NLNIQEQLNDNDKKRLKQIRNIGISAHIDSGK 72
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 55.6 bits (128), Expect = 9e-09
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +2
Query: 440 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMXK 619
INLID+PGH DF+ EV ++ V DGA+ QT+ V +QA I ++F+ K
Sbjct: 95 INLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGVEAQTKVVWKQATKRGIPKVIFVNK 154
Query: 620 MDR 628
MDR
Sbjct: 155 MDR 157
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 52.4 bits (120), Expect = 8e-08
Identities = 33/112 (29%), Positives = 55/112 (49%)
Frame = +2
Query: 293 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVD 472
R+TDT E++R ++IKST +++ D + K+ F ID+PGHVD
Sbjct: 177 RYTDTHYLERERVMSIKSTPLTLAVS------------DMKGKT---FAFQCIDTPGHVD 221
Query: 473 FSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMXKMDR 628
F EV A + ++DG + T +++ AI + +L + K+DR
Sbjct: 222 FVDEVAAPMAISDGVVLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDR 273
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 49.2 bits (112), Expect = 8e-07
Identities = 37/134 (27%), Positives = 61/134 (45%)
Frame = +2
Query: 224 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 403
KSTL+D ++ G+I +F D + E+ R IT+K+ SM + +
Sbjct: 71 KSTLSDCILKLTGVI-NEHNFRNQFLDKLEVERRRGITVKAQTCSMIYYYHGQS------ 123
Query: 404 PDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 583
+L+NLID+PGHVDF +EV +L +G + QT + A
Sbjct: 124 ----------YLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQGIQAQTLSNFYMAF 173
Query: 584 AERIKPILFMXKMD 625
++ + I + K+D
Sbjct: 174 SQNLVIIPVLNKVD 187
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 154 IRGMMDKKRNIRNMSVIAHVDHGQ 225
+RG+ + +RN +VIAH+DHG+
Sbjct: 50 VRGIPQNR--VRNWAVIAHIDHGK 71
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 206 AITDMLRIFRFLSIIPRISSTVKFTILDWFMIFVL-LNQLPYAK 78
A+ + IF L+ IP + S FTI+D+FM+F L LN AK
Sbjct: 459 ALRATIFIFSLLTFIP-LPSAYLFTIIDFFMVFALFLNDKILAK 501
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +2
Query: 224 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 403
K+ +T L S+ ++A A R+ D + ++ I +ST +S F D++FI
Sbjct: 462 KAGITTILNSRTSVLAAANPIFGRYDDMKTPGEN--IDFQSTILSRF------DMIFIVK 513
Query: 404 PDQREKSEKGFLINLIDSPGHVDFSSEVTA 493
+ E ++ ++I+ ++ SSE A
Sbjct: 514 DEHDETKDRNIARHVINLHTNLQESSETLA 543
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -3
Query: 567 TVSVCTHTPD-TQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 391
T + C+ P+ T ST + +V+ S + ++ ST P ++ + S S V +
Sbjct: 575 TTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSHLS-----SSSVHS 629
Query: 390 TKSFSSSSKNIEMAV 346
+ + SSSS++ M++
Sbjct: 630 SSAHSSSSRSSSMSL 644
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 570 STVSVCTHTPDTQSTT-TRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 394
+T S + +P + STT T +PS + S++ +S S+ S S S S
Sbjct: 135 TTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 194
Query: 393 NTKSFSSSSKNIEMAV 346
++ S SSSS + + +
Sbjct: 195 SSSSSSSSSSSSSVPI 210
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -3
Query: 573 RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 394
++TVS + + T S+++ +PS + + TS S+ S S S S
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183
Query: 393 NTKSFSSSSKN 361
++ S SSSS +
Sbjct: 184 SSSSSSSSSSS 194
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +2
Query: 449 IDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI-LFMXKMD 625
+D PGH D+ + DGA+ QT L A +K I +++ K+D
Sbjct: 121 VDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQTREHLLLARQVGVKQIVVYINKVD 180
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 55 LFQSVR-HCLAYGSWFNRTKIINQSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGQ 225
LFQ R +CL + +IN+ + T + + + KK ++ N+ I HVDHG+
Sbjct: 10 LFQGFRKNCLRLNRISFASGLINRFTVPARTYADEKVFVRKKPHV-NIGTIGHVDHGK 66
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 480 EEKSTCPGESIKLIKKPFSLFSRWSGFVMNTKSFSS-SSKNIEMAVDLMVMQRSCSSLRV 304
EE + P + K KK S F+ T +S S++NI+ A+DL+ + S S ++
Sbjct: 66 EEMESLPSKGGKGSKKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSLNNSSSKDKI 125
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 336 VMQRSCSSLRVSVKRVSPALAPAMIPALETNESVRVDLTVIDVGDHRHVADIPLLVH 166
V++ SC +S+ + AP + + R + V++ D R++ ++P+LVH
Sbjct: 651 VVKTSCIGDTMSLPVLLTGSAPWTLEYEIFRNNKREESHVVESKDPRYILEVPMLVH 707
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 432 PFSLFSRWSGFVMNTK-SFSSSSKNIEMAVDLMVMQR 325
P S +S W+ V+NTK SFS ++M +L+ Q+
Sbjct: 168 PKSTYSYWAS-VLNTKASFSKKKSRVQMVKELIDGQK 203
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,082,492
Number of Sequences: 5004
Number of extensions: 57572
Number of successful extensions: 205
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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