Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_N02
(899 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 216 2e-56
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 213 1e-55
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 85 5e-17
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 66 3e-11
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 66 3e-11
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 59 5e-09
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 57 2e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 32 0.49
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 1.5
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 31 1.5
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 31 1.5
AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical ... 30 2.6
AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical ... 30 2.6
AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical ... 30 2.6
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL117193-12|CAB60305.1| 415|Caenorhabditis elegans Hypothetical... 29 4.5
Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical pr... 29 6.0
U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr... 29 6.0
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 29 6.0
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 29 6.0
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 216 bits (528), Expect = 2e-56
Identities = 120/188 (63%), Positives = 131/188 (69%), Gaps = 8/188 (4%)
Frame = +2
Query: 224 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 403
KSTLTDSLVSKAGIIAG++AGETRFTDTRKDEQ+RCITIKSTAIS+FFELE+KDL F+
Sbjct: 32 KSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFELEKKDLEFVKG 91
Query: 404 PDQRE------KSEK--GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQT 559
+Q E K EK GFLINLIDSPGHVDFSSEVTAALRVTDGAL QT
Sbjct: 92 ENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQT 151
Query: 560 ETVLRQAIAERIKPILFMXKMDRXXXXXXXXXXXXYQXVPXYCRKC*PXL*ATYNDDGGP 739
ETVLRQAIAERIKP+LFM KMDR +Q + ATY DD GP
Sbjct: 152 ETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENI-NVIIATYGDDDGP 210
Query: 740 MGEVXCRP 763
MG + P
Sbjct: 211 MGPIMVDP 218
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +1
Query: 130 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGQ 225
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHG+
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGK 32
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 213 bits (521), Expect = 1e-55
Identities = 119/188 (63%), Positives = 130/188 (69%), Gaps = 8/188 (4%)
Frame = +2
Query: 224 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 403
KSTLTDSLVSKAGIIAG++AGETRFTDTRKDEQ+RCITIKSTAIS+FFELE+KDL F+
Sbjct: 32 KSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFELEKKDLEFVKG 91
Query: 404 PDQRE------KSEK--GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQT 559
+Q E K EK GFLINLIDSPGHVDFSSEVTAAL VTDGAL QT
Sbjct: 92 ENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSGVCVQT 151
Query: 560 ETVLRQAIAERIKPILFMXKMDRXXXXXXXXXXXXYQXVPXYCRKC*PXL*ATYNDDGGP 739
ETVLRQAIAERIKP+LFM KMDR +Q + ATY DD GP
Sbjct: 152 ETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENI-NVIIATYGDDDGP 210
Query: 740 MGEVXCRP 763
MG + P
Sbjct: 211 MGPIMVDP 218
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +1
Query: 130 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGQ 225
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHG+
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGK 32
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 85.4 bits (202), Expect = 5e-17
Identities = 56/135 (41%), Positives = 74/135 (54%)
Frame = +2
Query: 224 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 403
K++ DSLVS +I+ AG+ R+ D+R+DEQ R IT+KS+ IS+ E
Sbjct: 33 KTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE----------- 81
Query: 404 PDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 583
LINLIDSPGHVDFS EVT+AL ++D AL QTE ++RQ I
Sbjct: 82 ---------PLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVI 132
Query: 584 AERIKPILFMXKMDR 628
IL + K+DR
Sbjct: 133 RNGQAMILVINKIDR 147
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 85.4 bits (202), Expect = 5e-17
Identities = 56/135 (41%), Positives = 74/135 (54%)
Frame = +2
Query: 224 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 403
K++ DSLVS +I+ AG+ R+ D+R+DEQ R IT+KS+ IS+ E
Sbjct: 33 KTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE----------- 81
Query: 404 PDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 583
LINLIDSPGHVDFS EVT+AL ++D AL QTE ++RQ I
Sbjct: 82 ---------PLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVI 132
Query: 584 AERIKPILFMXKMDR 628
IL + K+DR
Sbjct: 133 RNGQAMILVINKIDR 147
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 66.1 bits (154), Expect = 3e-11
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Frame = +2
Query: 224 KSTLTDSLVSKAGI-IAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFIT 400
K+T D L+ + A + RFTD E+ R +IKS +S I
Sbjct: 145 KTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQPVS------------IV 192
Query: 401 NPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 580
D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG + TE +R A
Sbjct: 193 AQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRHA 249
Query: 581 IAERIKPILFMXKMDR 628
I ER+ L + K+DR
Sbjct: 250 IQERLAVTLCISKIDR 265
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 66.1 bits (154), Expect = 3e-11
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Frame = +2
Query: 224 KSTLTDSLVSKAGI-IAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFIT 400
K+T D L+ + A + RFTD E+ R +IKS +S I
Sbjct: 20 KTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQPVS------------IV 67
Query: 401 NPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 580
D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG + TE +R A
Sbjct: 68 AQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRHA 124
Query: 581 IAERIKPILFMXKMDR 628
I ER+ L + K+DR
Sbjct: 125 IQERLAVTLCISKIDR 140
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 58.8 bits (136), Expect = 5e-09
Identities = 48/149 (32%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
Frame = +2
Query: 203 SPTSITVKSTLTDSLVSKAGIIAGARAGETRFTDT------RKDEQDRCITIKSTAISM- 361
+P+S+ V + GI A +G+T T+ R D +M
Sbjct: 29 APSSVVVPGVRPIERIRNIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMD 88
Query: 362 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 541
F +LE + + I + G IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 89 FMDLERQRGITIQSA-ATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVG 147
Query: 542 XXXXQTETVLRQAIAERIKPILFMXKMDR 628
QT TV RQ + I F+ KMDR
Sbjct: 148 GVQSQTFTVNRQLARYNVPFICFVNKMDR 176
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.8 bits (131), Expect = 2e-08
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Frame = +2
Query: 224 KSTLTDSLVSKAGII--AGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFI 397
K+T+T+ L+ AG I AG TD E++R IT++S A+++ +
Sbjct: 38 KTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITVQSAAVNLDW---------- 87
Query: 398 TNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 577
KG INLID+PGHVDF EV +RV DG + QT TV RQ
Sbjct: 88 ----------KGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQ 137
Query: 578 AIAERIKPILFMXKMDR 628
+ ++ F+ KMD+
Sbjct: 138 SSKFKLPAHFFINKMDK 154
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 56.4 bits (130), Expect = 3e-08
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Frame = +2
Query: 206 PTSITVKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELE-EK 382
PT + S T + GI+A G++ D + C + M +L+ E+
Sbjct: 28 PTKLVNLSEFTPDKIRNFGIVAHVDHGKSTLADRLLE---MCGAVPPGQKQMLDKLQVER 84
Query: 383 DLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTE 562
+ +G+L+NLID+PGHVDFS+EV+ +L V DG L QT
Sbjct: 85 ERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQTI 144
Query: 563 TVLRQAIAERIKPILFMXKMD 625
A + I+ I + K+D
Sbjct: 145 ANFWLAFEKNIQIIPVINKID 165
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 76 CLAYGSWFNRTKIINQSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGQ 225
C Y + + TK++N S+ FT D+IR N ++AHVDHG+
Sbjct: 19 CKHYSTAGDPTKLVNLSE---FTPDKIR----------NFGIVAHVDHGK 55
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -3
Query: 588 SAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRW 409
+AI ++ + T +T STT+ P +T + + +E T S+ P L RW
Sbjct: 691 TAIFAEASTGIITTDEETTSTTSTTPEITSTKEIVTESAITQTSVSVVESSTPRQLPERW 750
Query: 408 SGFVMNTK 385
V K
Sbjct: 751 KAIVNKFK 758
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 570 STVSVCTHTPDTQSTTTRAPSVTRS-AAVTSEEKSTCPGESIKLIKKP 430
+T + T T T +TTT P+ T + A TSE +T P + + KP
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKP 269
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 570 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKK 433
+T + T + +TTT APS T + VT K P E KL+KK
Sbjct: 764 TTAAPSTKPAEETTTTTEAPSTT-TKPVTVAVKKVSPEEMEKLVKK 808
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 431 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILF 610
GFLI ID+PGH FS+ T + D A+ QT L+ I + ++
Sbjct: 550 GFLI--IDTPGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQTIESLKLLIKGKTPFVIA 607
Query: 611 MXKMDR 628
+ K+DR
Sbjct: 608 LNKIDR 613
>AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical
protein Y102A5C.15 protein.
Length = 338
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -3
Query: 453 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDLMVMQ 328
S+ L+ PF L +R +G+ + FSS S + MAV ++ +Q
Sbjct: 68 SVTLLGIPFILATRLAGYSLGLLKFSSYSFLVTMAVSVLSLQ 109
>AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical
protein C47F8.8 protein.
Length = 347
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 547 HTRHTVNNHKGSISDTECSCYFRREINV 464
H T H G IS T C+ +FRR I +
Sbjct: 15 HNTETTRRHFGIISCTACAAFFRRSIGM 42
>AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical
protein F43E2.3 protein.
Length = 631
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 540 DTQSTTTRAPSVTRSAAVTSEEKSTCPGESIK 445
D+ +T R+P TRS ++TS + C G+ I+
Sbjct: 174 DSANTILRSPYSTRSDSITSVDSGQCSGDQIE 205
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 570 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCP 460
ST + T T T +TTT AP+ T + T+E P
Sbjct: 210 STSTTTTTTTSTTTTTTEAPTTTTTIKTTTESIEPIP 246
>AL117193-12|CAB60305.1| 415|Caenorhabditis elegans Hypothetical
protein Y105C5A.23 protein.
Length = 415
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 273 VREPERPVSLTRVRTNKTVASPLNLRPSLCSSSLKRKI*YSSQTLTS 413
++EPE+P++ R+ + PL RPS+ S + T TS
Sbjct: 286 IKEPEKPMTTPRIVVSDETEVPLTQRPSISPSEASAVMRTGVHTSTS 332
>Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical
protein F40E10.5 protein.
Length = 284
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -3
Query: 552 THTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESI---KLIKKPFSLF 418
T T T +TTT AP++ + + T+E+ +T +I + +K FS F
Sbjct: 218 TTTTTTTTTTTEAPTMPEAVSSTTEQSTTTTAAAIIAEETKEKEFSAF 265
>U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical protein
R08E3.1b protein.
Length = 1465
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 570 STVSVCTHTPDTQSTTTRAPSVTRSAAVTS 481
STVSV T T ST+T APS ++S V++
Sbjct: 1044 STVSVITSTTMLPSTSTVAPSTSQSTIVST 1073
>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical protein
R08E3.1a protein.
Length = 1512
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 570 STVSVCTHTPDTQSTTTRAPSVTRSAAVTS 481
STVSV T T ST+T APS ++S V++
Sbjct: 1044 STVSVITSTTMLPSTSTVAPSTSQSTIVST 1073
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 210 VGDHRHVADIPLLVHHPTDLVYREIHHFRLVYDFCSIKPTTI 85
V +H D+ L P LV++ H+F LV FC I PT I
Sbjct: 169 VKEHGGKLDLSDLFSDPV-LVFQRKHYFPLVILFCFILPTII 209
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 210 VGDHRHVADIPLLVHHPTDLVYREIHHFRLVYDFCSIKPTTI 85
V +H D+ L P LV++ H+F LV FC I PT I
Sbjct: 169 VKEHGGKLDLSDLFSDPV-LVFQRKHYFPLVILFCFILPTII 209
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 573 RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 466
++T + T T T +TTT P+ + A + +KST
Sbjct: 163 KTTTTTTTSTTSTSTTTTEKPTTATTTARVTPKKST 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,318,339
Number of Sequences: 27780
Number of extensions: 337519
Number of successful extensions: 1251
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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