Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_N01
(909 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 66 9e-12
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 50 3e-07
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 46 7e-06
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 45 2e-05
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 40 4e-04
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 40 6e-04
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 39 9e-04
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 39 9e-04
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 39 0.001
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 37 0.005
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 35 0.018
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 28 1.6
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 28 1.6
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 27 2.8
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 2.8
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 27 2.8
SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces pomb... 27 3.7
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 26 6.4
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 6.4
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 26 8.5
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 65.7 bits (153), Expect = 9e-12
Identities = 25/63 (39%), Positives = 47/63 (74%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 662
+L++LDTAG E++++MR+ Y++ G+GF++VY++T+ +F +I + I RVK + P+
Sbjct: 57 LLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPV 116
Query: 663 LLV 671
+LV
Sbjct: 117 VLV 119
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2
Query: 314 LRSTIMREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
+RST +RE+ ALT+Q + F+++YDPTIED YRK+ E+D
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEID 52
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 50.4 bits (115), Expect = 3e-07
Identities = 22/62 (35%), Positives = 42/62 (67%)
Frame = +3
Query: 489 EILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILL 668
EI+DTAG ++++ + + G+V+VYS+T+ +F+ +K +++ I G+E VPI++
Sbjct: 57 EIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVV 116
Query: 669 VG 674
VG
Sbjct: 117 VG 118
Score = 32.7 bits (71), Expect = 0.074
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEIE 463
+LTVQ+V F+E Y PTIE+ + K I+
Sbjct: 21 SLTVQYVENHFVESYYPTIENTFSKNIK 48
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 46.0 bits (104), Expect = 7e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L++ DTAG E+F S+ YI++ ++VY +TNH +F + + E + +G + V I+
Sbjct: 62 LQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDD-VIIV 120
Query: 666 LVG 674
LVG
Sbjct: 121 LVG 123
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E+F ++ Y + G ++VY +T+ +F ++K + I R E V L
Sbjct: 59 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRY-AVEGVNRL 117
Query: 666 LVG 674
LVG
Sbjct: 118 LVG 120
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E+F S+ Y + G V+VY +TN +F+++ I R + ++
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDI-RAMAPSTICVV 122
Query: 666 LVG 674
L G
Sbjct: 123 LAG 125
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 39.5 bits (88), Expect = 6e-04
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 489 EILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI-KPMKELITRVKGSERVPIL 665
+I DTAG E++ ++ Y + G ++VY +T +F ++ + +KEL R + I+
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKEL--REHADSNIVIM 119
Query: 666 LVG 674
LVG
Sbjct: 120 LVG 122
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 39.1 bits (87), Expect = 9e-04
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKP-MKELITRVKGSERVPI 662
LEI DTAG E++ S+ +Y +N +VVY +T + + K +KEL + + E + I
Sbjct: 66 LEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKEL--QRQAPEGIVI 123
Query: 663 LLVG 674
L G
Sbjct: 124 ALAG 127
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 39.1 bits (87), Expect = 9e-04
Identities = 18/63 (28%), Positives = 37/63 (58%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E+F ++ Y + G +++Y +T+ ++F +++ + + SE V +
Sbjct: 60 LQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ-HASENVYKI 118
Query: 666 LVG 674
L+G
Sbjct: 119 LIG 121
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +3
Query: 492 ILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLV 671
+ DTAG E+ +RD Y GQ ++++ +T+ T++++ + RV E +PI+L
Sbjct: 62 VWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRV--CENIPIVLC 119
Query: 672 G 674
G
Sbjct: 120 G 120
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 477 LXVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMK-ELITRVKGSE- 650
L L++ DTAG E+F S+ + + V+VY++ N ++F ++ + E + + E
Sbjct: 56 LVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDEC 115
Query: 651 RVPILLVG 674
P ++VG
Sbjct: 116 AFPFIIVG 123
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 34.7 bits (76), Expect = 0.018
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMK-ELITRVKGS--ERV 656
L++ DTAG E+F S+ + + V+VY + N ++F+ + + E + + S E
Sbjct: 59 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETF 118
Query: 657 PILLVG 674
P +L+G
Sbjct: 119 PFILLG 124
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -3
Query: 484 TXRRIVHFDFFSVEILYRRIIFFHKTS*YKLHSQRTLSDPTRTQHDHFK 338
T ++ FD SV L+RR + + ++ K HS++ S+P+ +H +
Sbjct: 97 TKKKKDSFDHASVTSLHRRSLSSNTSTPRKYHSRKPYSEPSVIDKEHLQ 145
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 758 LRSK-PQXKXXTQRXPXCLAEXCAXKMN 838
L++K P + TQR P C +E CA ++N
Sbjct: 352 LKAKVPYSRQFTQRCPGCTSESCAERIN 379
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 383 LTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
L + F G F E Y PT+ + Y ++EVD
Sbjct: 22 LLIVFSKGTFPEVYVPTVFENYVADVEVD 50
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 389 QSTHSFRPHPNPTRPL*IRA 330
Q THS RP PN + PL +R+
Sbjct: 589 QQTHSSRPTPNASSPLDVRS 608
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 383 LTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
L + F G F E Y PT+ + Y ++EVD
Sbjct: 22 LLIVFSKGTFPEVYVPTVFENYVADVEVD 50
>SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 353
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 485 FRNFGHRWHGAVCFDARSVYKKWSRLCSSIFINKPPNVSRHQTNEGID 628
F N GH W ++ FD KK C F P R Q + +D
Sbjct: 188 FTNLGHTWQNSILFDKS---KKSILTCLHYFPRDPSQPFRSQASLTLD 232
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 709 HLNXDVPSQPYXPTSRIGTRSDPLTRVINS 620
H + PSQ Y S RSDP TR +++
Sbjct: 327 HTHSTPPSQMYSAASHFRYRSDPSTRHVSN 356
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 139 LQLHSTNNFKDKRRNITSIQLT*STPAWFN 50
L H T FK ++RN+ SI LT P+ F+
Sbjct: 111 LSQHKTPEFKHRKRNVESI-LTPKNPSLFS 139
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 603 LETFGGLLMNILLQSLDH-FLYTDLASK 523
LETFGG L++S+ H F Y+ + +K
Sbjct: 132 LETFGGRFSKGLMKSMTHLFTYSGMGAK 159
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,983,060
Number of Sequences: 5004
Number of extensions: 56112
Number of successful extensions: 121
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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