Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_N01
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 115 4e-26
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 91 1e-18
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 76 3e-14
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 76 3e-14
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 76 3e-14
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 76 3e-14
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 69 4e-12
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 69 4e-12
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 68 8e-12
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 65 6e-11
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 65 6e-11
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 63 2e-10
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 52 6e-07
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 49 4e-06
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 46 3e-05
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 45 7e-05
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 44 1e-04
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 44 1e-04
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 44 1e-04
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 44 2e-04
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 44 2e-04
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 44 2e-04
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 43 3e-04
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 43 3e-04
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 43 3e-04
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 43 3e-04
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 43 3e-04
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 43 3e-04
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 42 5e-04
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 42 8e-04
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 42 8e-04
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 42 8e-04
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 41 0.001
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 40 0.002
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 40 0.003
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 39 0.004
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 39 0.004
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 38 0.007
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 38 0.010
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 38 0.010
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 38 0.010
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 38 0.013
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 37 0.017
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 37 0.023
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 36 0.040
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 35 0.092
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 33 0.28
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 33 0.37
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 33 0.37
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 31 0.86
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 30 2.6
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 115 bits (277), Expect = 4e-26
Identities = 65/106 (61%), Positives = 71/106 (66%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 662
VLEILDTAGTEQF+SMRDLYIKNGQGFVVVYS+T+ QTF DI+ MKE I RVKGSE VPI
Sbjct: 52 VLEILDTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPI 111
Query: 663 LLVGX*G*LGTSXLRWXHAEGRCXXRXCGACPFXXSLSXKXXPNVN 800
LLVG S R +E +CPF S K NVN
Sbjct: 112 LLVG--NKCDLSHQRQVRSEEGLALAESWSCPF-TECSAKNNQNVN 154
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/50 (64%), Positives = 33/50 (66%)
Frame = +2
Query: 329 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSP 478
MREF ALTVQFVS F+EKYDPTIEDFYRKEIEVD P
Sbjct: 1 MREFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQP 50
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 91.1 bits (216), Expect = 1e-18
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 662
+LEILDTAGTEQF +MRDLY+KNGQGFV+VYS+T TF D+ +++ I RVK ++ VP+
Sbjct: 52 MLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPM 111
Query: 663 LLVG 674
+LVG
Sbjct: 112 ILVG 115
Score = 58.0 bits (134), Expect = 9e-09
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = +2
Query: 329 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
MRE+ ALTVQFV G F+EKYDPTIED YRK++EVD
Sbjct: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVD 47
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 76.2 bits (179), Expect = 3e-14
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = +3
Query: 477 LXVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERV 656
L LEILDTAG E+F++MR+ Y++ G GF++V+++T+ +F+++K + ELI R+K +
Sbjct: 64 LCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF 123
Query: 657 PILLVG 674
PI+LVG
Sbjct: 124 PIILVG 129
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
ALT+QF+ F++ YDPTIED Y K+ VD
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVD 61
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 76.2 bits (179), Expect = 3e-14
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = +3
Query: 477 LXVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERV 656
L LEILDTAG E+F++MR+ Y++ G GF++V+++T+ +F+++K + ELI R+K +
Sbjct: 64 LCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF 123
Query: 657 PILLVG 674
PI+LVG
Sbjct: 124 PIILVG 129
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
ALT+QF+ F++ YDPTIED Y K+ VD
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVD 61
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 76.2 bits (179), Expect = 3e-14
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = +3
Query: 477 LXVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERV 656
L LEILDTAG E+F++MR+ Y++ G GF++V+++T+ +F+++K + ELI R+K +
Sbjct: 64 LCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF 123
Query: 657 PILLVG 674
PI+LVG
Sbjct: 124 PIILVG 129
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
ALT+QF+ F++ YDPTIED Y K+ VD
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVD 61
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 76.2 bits (179), Expect = 3e-14
Identities = 31/66 (46%), Positives = 51/66 (77%)
Frame = +3
Query: 477 LXVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERV 656
L LEILDTAG E+F++MR+ Y++ G GF++V+++T+ +F+++K + ELI R+K +
Sbjct: 64 LCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF 123
Query: 657 PILLVG 674
PI+LVG
Sbjct: 124 PIILVG 129
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
ALT+QF+ F++ YDPTIED Y K+ VD
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVD 61
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 69.3 bits (162), Expect = 4e-12
Identities = 28/64 (43%), Positives = 51/64 (79%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 662
+L+ILDTAG E++++MRD Y++ G+GF++V+++ ++F+++ +E I RVK S+ VP+
Sbjct: 52 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPM 111
Query: 663 LLVG 674
+LVG
Sbjct: 112 VLVG 115
Score = 44.8 bits (101), Expect = 9e-05
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
ALT+Q + F+E+YDPTIED YRK++ +D
Sbjct: 18 ALTIQLIQNHFVEEYDPTIEDSYRKQVVID 47
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 69.3 bits (162), Expect = 4e-12
Identities = 28/64 (43%), Positives = 51/64 (79%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 662
+L+ILDTAG E++++MRD Y++ G+GF++V+++ ++F+++ +E I RVK S+ VP+
Sbjct: 55 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPM 114
Query: 663 LLVG 674
+LVG
Sbjct: 115 VLVG 118
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 326 IMREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
+M E+ ALT+Q + F+E+YDPTIED YRK++ +D
Sbjct: 3 VMTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVID 50
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 68.1 bits (159), Expect = 8e-12
Identities = 33/63 (52%), Positives = 44/63 (69%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
LEILDTAGTEQF MR+ Y + QGFV+V+SL TF+++K I ++G E VP++
Sbjct: 53 LEILDTAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKE-VPMI 111
Query: 666 LVG 674
LVG
Sbjct: 112 LVG 114
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 329 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
M+E+ ALT+Q+V G F+ YD TIED YRK +VD
Sbjct: 1 MKEYKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVD 47
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 65.3 bits (152), Expect = 6e-11
Identities = 25/63 (39%), Positives = 46/63 (73%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 662
++++LDTAG E+F++MR+ YI+ G+GF++V+S+T ++F++ + + RVK P+
Sbjct: 66 IMDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPV 125
Query: 663 LLV 671
LLV
Sbjct: 126 LLV 128
Score = 36.7 bits (81), Expect = 0.023
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNS 475
+LT+QF F++ YDPTIED Y + E+D +
Sbjct: 32 SLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGN 63
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 65.3 bits (152), Expect = 6e-11
Identities = 25/63 (39%), Positives = 46/63 (73%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 662
++++LDTAG E+F++MR+ YI+ G+GF++V+S+T ++F++ + + RVK P+
Sbjct: 66 IMDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPV 125
Query: 663 LLV 671
LLV
Sbjct: 126 LLV 128
Score = 36.7 bits (81), Expect = 0.023
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNS 475
+LT+QF F++ YDPTIED Y + E+D +
Sbjct: 32 SLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGN 63
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/67 (43%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSE-RVPI 662
++ILDTAG E ++++RD Y ++G+GF+ V+S+ + ++F+ +E I RVK S+ VPI
Sbjct: 67 IDILDTAGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPI 126
Query: 663 LLVGX*G 683
+LVG G
Sbjct: 127 VLVGNKG 133
Score = 35.9 bits (79), Expect = 0.040
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 469
ALT+QF+ F+E+Y+PT D YRK++ +D
Sbjct: 32 ALTLQFMYDEFVEEYEPTKADSYRKKVVLD 61
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 52.0 bits (119), Expect = 6e-07
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L++ DTAG E+F M +Y++N ++VY +T+ TF+D++ + + R G+E +
Sbjct: 107 LQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVY 166
Query: 666 LVG 674
L+G
Sbjct: 167 LIG 169
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E+F ++ Y + G +VVY +T+ +TF ++K + I R E V L
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRY-ACENVNKL 120
Query: 666 LVG 674
LVG
Sbjct: 121 LVG 123
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +3
Query: 528 MRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGS--ERVPILLVG 674
M+ L I G F+++YS+TN Q+F ++ P+ E++ VKG+ PI+LVG
Sbjct: 1 MQRLSISKGNAFILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVG 51
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/62 (35%), Positives = 36/62 (58%)
Frame = +3
Query: 489 EILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILL 668
EI DTAG E++ S+ +Y + Q +VVY +TN ++FQ K + + R + S + + L
Sbjct: 71 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQR-QASPNIVMAL 129
Query: 669 VG 674
G
Sbjct: 130 AG 131
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 611
L+I DTAG E+F ++ Y + G ++VY +TN ++F++IK
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIK 100
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 611
L+I DTAG E+F ++ Y + G ++VY +TN ++F++IK
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIK 100
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 611
L+I DTAG E+F ++ Y + G ++VY +TN ++F++IK
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIK 100
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 44.0 bits (99), Expect = 2e-04
Identities = 15/43 (34%), Positives = 31/43 (72%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 611
+L++ DTAG E+F S+ + ++ GF++++ +TN Q+F +I+
Sbjct: 66 LLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIR 108
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 44.0 bits (99), Expect = 2e-04
Identities = 15/43 (34%), Positives = 31/43 (72%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 611
+L++ DTAG E+F S+ + ++ GF++++ +TN Q+F +I+
Sbjct: 66 LLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIR 108
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L++ DTAG E+F S+ YI++ VVVY +TN +F + + +GS+ V I+
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSD-VIIM 119
Query: 666 LVG 674
LVG
Sbjct: 120 LVG 122
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E++ ++ Y + GF+++Y +TN ++F ++ I + E ++
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVV 131
Query: 666 LVG 674
LVG
Sbjct: 132 LVG 134
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E++ ++ Y + GF+++Y +TN ++F ++ I + E ++
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVV 131
Query: 666 LVG 674
LVG
Sbjct: 132 LVG 134
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E++ ++ Y + GF+++Y +TN ++F ++ I + E ++
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVV 131
Query: 666 LVG 674
LVG
Sbjct: 132 LVG 134
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E++ ++ Y + GF+++Y +TN ++F ++ I + E ++
Sbjct: 87 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVV 145
Query: 666 LVG 674
LVG
Sbjct: 146 LVG 148
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E++ ++ Y + GF+++Y +TN ++F ++ I + E ++
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVV 131
Query: 666 LVG 674
LVG
Sbjct: 132 LVG 134
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSER-VPI 662
L++ DTAG E+F S+ Y + G ++VY + Q+F ++ E I + +ER +PI
Sbjct: 512 LQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIK--ESTERSIPI 569
Query: 663 LLVG 674
+LVG
Sbjct: 570 ILVG 573
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 611
L+I DTAG E+F ++ Y + G VVVY +TN ++F ++K
Sbjct: 61 LQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVK 102
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +3
Query: 492 ILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLV 671
+ DTAG E+F +RD Y GQ ++++ +T T++++ + RV E +PI+L
Sbjct: 62 VWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARV--CENIPIVLC 119
Query: 672 G 674
G
Sbjct: 120 G 120
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 41.5 bits (93), Expect = 8e-04
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L++ DTAG E+F S+ YI++ VVVY +TN +F + + +G + V I+
Sbjct: 62 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCD-VIIV 120
Query: 666 LVG 674
LVG
Sbjct: 121 LVG 123
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E+F S+ Y ++ ++VY + N +F++ + I + G E V +
Sbjct: 54 LQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQI-KEYGKEAVQVT 112
Query: 666 LVG 674
LVG
Sbjct: 113 LVG 115
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E+F S+ Y ++ ++VY + N +F++ + I + G E V +
Sbjct: 54 LQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQI-KEYGKEAVQVT 112
Query: 666 LVG 674
LVG
Sbjct: 113 LVG 115
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 489 EILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKP-MKELITRVKGSERVPIL 665
+I DTAG E++ ++ Y + G ++VY + H T+++++ +KEL R + + I+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKEL--RDHADQNIVIM 120
Query: 666 LVG 674
LVG
Sbjct: 121 LVG 123
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/63 (30%), Positives = 37/63 (58%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
++I DTAG E+F Y + G ++VY ++ H+T++ ++ +++ R +E + I
Sbjct: 59 VQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVL-RDHANEDIVIT 117
Query: 666 LVG 674
LVG
Sbjct: 118 LVG 120
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 611
L++ DTAG E+F S+ Y +N G + +Y TN ++F+ ++
Sbjct: 69 LQLWDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVE 110
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L + DTAG +++ + GF++VY++ + ++F+ + E I R G +PI+
Sbjct: 63 LRVTDTAGQQEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIV 122
Query: 666 LVG 674
+VG
Sbjct: 123 IVG 125
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 380 ALTVQFVSGCFMEKYDPTIEDFYRKEI 460
AL ++F F E+Y+ TIED + K I
Sbjct: 28 ALVLRFTQNIFPERYESTIEDQHSKHI 54
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DTAG E F S+ Y + G ++VY +T TF + E R + + I+
Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLE-DARQHSNSNMVIM 115
Query: 666 LVG 674
L+G
Sbjct: 116 LIG 118
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 608
L+I DTAG E+F ++ Y + G ++VY +TN ++F +I
Sbjct: 60 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNI 100
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 608
L+I DTAG E+F ++ Y + G ++VY +TN ++F +I
Sbjct: 60 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNI 100
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 489 EILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKP-MKELITRVKGSERVPIL 665
+I DTAG E++ ++ Y + G ++VY + H T+++++ +KEL R + + I+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKEL--RDHADQNIVIM 120
Query: 666 LVG 674
VG
Sbjct: 121 PVG 123
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 38.3 bits (85), Expect = 0.007
Identities = 14/42 (33%), Positives = 29/42 (69%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 611
LE+ DTAG E++ ++ + Y + G + VY +TN ++F++++
Sbjct: 57 LELWDTAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLE 98
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 608
L++ DTAG F ++R L + FV+VYS+ + Q+F+D+
Sbjct: 59 LQLHDTAGQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDV 99
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKP-MKELIT 632
L I DTAG E+F ++ Y + QG + VY +T+ +F+ + M+E+ T
Sbjct: 35 LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDT 84
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKP-MKELIT 632
L I DTAG E+F ++ Y + QG + VY +T+ +F+ + M+E+ T
Sbjct: 62 LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDT 111
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/63 (28%), Positives = 37/63 (58%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 662
+++I+D++G+ F M++LYI F+VV++ + + ++ I +G+ VP+
Sbjct: 72 MVQIIDSSGSRDFIGMKNLYIGTADAFLVVFAADDASSLEEALSTLSDIHARRGNS-VPV 130
Query: 663 LLV 671
LLV
Sbjct: 131 LLV 133
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 37.1 bits (82), Expect = 0.017
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 611
+++ DTAG E+F S+ Y + G V+++ +T+ Q+F +++
Sbjct: 254 MQLWDTAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVR 295
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 36.7 bits (81), Expect = 0.023
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L + DT G E+F S+ Y ++ G ++VY +T+ ++F ++ + R+ G + I+
Sbjct: 57 LHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRL-GDPDIVIV 115
Query: 666 LVG 674
L+G
Sbjct: 116 LIG 118
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 35.9 bits (79), Expect = 0.040
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L+I DT G E+F ++ Y ++ G V+ Y +T Q+F ++ + +++ V +L
Sbjct: 61 LQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLL 120
Query: 666 L 668
+
Sbjct: 121 I 121
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 34.7 bits (76), Expect = 0.092
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 608
L+I DTAG E+F ++ Y + G ++VY +T T+ +
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL 102
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 513 EQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVG 674
E+F +RD Y GQ ++++ +T T++++ + RV E +PI+L G
Sbjct: 3 EKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDLARV--CENIPIVLCG 54
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTF 599
L+I DTAG E+F S+ Y ++ V+VY ++ +F
Sbjct: 58 LQIWDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSF 95
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
+ + DTAG + +R L + F+V +S+ + +T + + R + VPI+
Sbjct: 54 VNLFDTAGQGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIM 113
Query: 666 LVG 674
LVG
Sbjct: 114 LVG 116
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 665
L++ DTAG E+F + YI++ + ++V L++ + + K +I + K S+ +
Sbjct: 58 LQLWDTAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIRWKGIIDKNK-SDFTSTI 116
Query: 666 LVG 674
+VG
Sbjct: 117 IVG 119
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 486 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVP 659
L+I DTAG E+F S+ + + V+ + +TN +F+ + ++ ++ S R P
Sbjct: 60 LQIWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFL-IQASPRDP 116
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +3
Query: 483 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 662
++++ D G M D Y+ +VY +TN ++F++ ++ + S P+
Sbjct: 86 LVQVWDIGGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPV 145
Query: 663 LLV 671
LV
Sbjct: 146 KLV 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,601,185
Number of Sequences: 27780
Number of extensions: 316950
Number of successful extensions: 656
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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