Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_N01
         (909 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.95 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   5.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   8.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   8.9  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   8.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   8.9  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 602  RHQTNEGIDYSCQRIRTCTNSTCGXIRLTW 691
            R  T EG+        TCT  T   IR++W
Sbjct: 1073 RQHTAEGVPEQPPHDTTCTTLTSQTIRISW 1102


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 415 HKTS*YKLHSQRTLSDPTRTQHDHFK 338
           H  S Y+L +  TL+   RT +DH K
Sbjct: 27  HILSKYQLITSTTLNWLPRTHYDHLK 52


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 640 KDQNVYQFYLWXXK 681
           KD+NV Q +LW  K
Sbjct: 73  KDKNVVQKFLWWYK 86


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 640 KDQNVYQFYLWXXK 681
           KD+NV Q +LW  K
Sbjct: 73  KDKNVVQKFLWWYK 86


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 410 FMEKYDPTIEDFYRKEIEVDNSPXCFRNFG 499
           F + +DP IED++    + D  P   ++FG
Sbjct: 61  FADLFDPIIEDYHGGFKKTDKHPP--KDFG 88


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 410 FMEKYDPTIEDFYRKEIEVDNSPXCFRNFG 499
           F + +DP IED++    + D  P   ++FG
Sbjct: 77  FADLFDPIIEDYHGGFKKTDKHPP--KDFG 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,083
Number of Sequences: 438
Number of extensions: 3518
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)