Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M24
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p pro...   128   1e-29
AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA...   128   1e-29
BT009966-1|AAQ22435.1| 1091|Drosophila melanogaster RE68041p pro...    30   4.8  
AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5...    30   4.8  
AE014296-2088|AAF49966.3| 1093|Drosophila melanogaster CG5661-PA...    30   4.8  

>AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p
           protein.
          Length = 295

 Score =  128 bits (309), Expect = 1e-29
 Identities = 60/87 (68%), Positives = 66/87 (75%)
 Frame = +2

Query: 155 MSCRQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXR 334
           MS R+A HAG WYT++G+ELSRQLD WL  ADL+HGPARAIIAPH              R
Sbjct: 1   MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYR 60

Query: 335 QVSPVVVKRIFILGPSHHVRIAGCALS 415
           QVSPVVVKRIFILGPSHHVR+ GCALS
Sbjct: 61  QVSPVVVKRIFILGPSHHVRLRGCALS 87



 Score =  114 bits (274), Expect = 2e-25
 Identities = 54/79 (68%), Positives = 63/79 (79%)
 Frame = +3

Query: 420 SNKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAKVMEEYKTSFT 599
           + KY+TPLYDL ID QI +ELE T +F  MD +TDE+EHSIEMHLPYIAKVME+YK  FT
Sbjct: 89  AKKYRTPLYDLKIDAQINSELEKTGKFSWMDMKTDEDEHSIEMHLPYIAKVMEDYKDQFT 148

Query: 600 IIPILVGSLTPEKGIQVRS 656
           I+PILVGSL PE+  Q  S
Sbjct: 149 IVPILVGSLNPEQEAQYGS 167



 Score = 87.0 bits (206), Expect = 3e-17
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = +1

Query: 637 RESKYGAILAPYLADPQNLLVISSDFCHWGSRFRYTWKDSSRGPIYQSIEWLDKLGMD 810
           +E++YG++L+ YL DP NL VISSDFCHWG RF YT+ DSS G I++SIE LDK GMD
Sbjct: 161 QEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFSYTYYDSSCGAIHKSIEKLDKQGMD 218


>AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA
           protein.
          Length = 295

 Score =  128 bits (309), Expect = 1e-29
 Identities = 60/87 (68%), Positives = 66/87 (75%)
 Frame = +2

Query: 155 MSCRQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXR 334
           MS R+A HAG WYT++G+ELSRQLD WL  ADL+HGPARAIIAPH              R
Sbjct: 1   MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYR 60

Query: 335 QVSPVVVKRIFILGPSHHVRIAGCALS 415
           QVSPVVVKRIFILGPSHHVR+ GCALS
Sbjct: 61  QVSPVVVKRIFILGPSHHVRLRGCALS 87



 Score =  114 bits (274), Expect = 2e-25
 Identities = 54/79 (68%), Positives = 63/79 (79%)
 Frame = +3

Query: 420 SNKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAKVMEEYKTSFT 599
           + KY+TPLYDL ID QI +ELE T +F  MD +TDE+EHSIEMHLPYIAKVME+YK  FT
Sbjct: 89  AKKYRTPLYDLKIDAQINSELEKTGKFSWMDMKTDEDEHSIEMHLPYIAKVMEDYKDQFT 148

Query: 600 IIPILVGSLTPEKGIQVRS 656
           I+PILVGSL PE+  Q  S
Sbjct: 149 IVPILVGSLNPEQEAQYGS 167



 Score = 87.0 bits (206), Expect = 3e-17
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = +1

Query: 637 RESKYGAILAPYLADPQNLLVISSDFCHWGSRFRYTWKDSSRGPIYQSIEWLDKLGMD 810
           +E++YG++L+ YL DP NL VISSDFCHWG RF YT+ DSS G I++SIE LDK GMD
Sbjct: 161 QEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFSYTYYDSSCGAIHKSIEKLDKQGMD 218


>BT009966-1|AAQ22435.1| 1091|Drosophila melanogaster RE68041p
           protein.
          Length = 1091

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -1

Query: 808 PFPVCPATRCSGKWGPWSYPSTCT*ICCPSGRSRMR 701
           P PV       G WGPW   S C+  C    R R R
Sbjct: 659 PCPVAKPQSVDGGWGPWGEWSECSAQCGGGFRMRRR 694


>AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5C
           protein.
          Length = 1081

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -1

Query: 808 PFPVCPATRCSGKWGPWSYPSTCT*ICCPSGRSRMR 701
           P PV       G WGPW   S C+  C    R R R
Sbjct: 649 PCPVAKPQSVDGGWGPWGEWSECSAQCGGGFRMRRR 684


>AE014296-2088|AAF49966.3| 1093|Drosophila melanogaster CG5661-PA
           protein.
          Length = 1093

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -1

Query: 808 PFPVCPATRCSGKWGPWSYPSTCT*ICCPSGRSRMR 701
           P PV       G WGPW   S C+  C    R R R
Sbjct: 661 PCPVAKPQSVDGGWGPWGEWSECSAQCGGGFRMRRR 696


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,738,169
Number of Sequences: 53049
Number of extensions: 942728
Number of successful extensions: 2635
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2635
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)