Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_M23
(875 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069570-1|AAH69570.1| 456|Homo sapiens chromosome 6 open readi... 69 3e-11
AL137783-1|CAI19370.1| 456|Homo sapiens protein ( Human DNA seq... 69 3e-11
AL032821-1|CAI95705.1| 456|Homo sapiens protein ( Human DNA seq... 69 3e-11
AL137783-2|CAI19371.1| 107|Homo sapiens protein ( otein, the RP... 49 3e-05
AL032821-2|CAI95706.1| 107|Homo sapiens protein ( of hepatic le... 49 3e-05
AK126810-1|BAC86703.1| 195|Homo sapiens protein ( Homo sapiens ... 32 3.1
AY427820-1|AAR05120.1| 321|Homo sapiens G-protein coupled recep... 30 9.6
AC016526-1|AAG38637.1| 482|Homo sapiens FLJ20689 protein. 30 9.6
AB154410-1|BAD20638.1| 321|Homo sapiens G protein-coupled recep... 30 9.6
AB083627-1|BAB89340.1| 321|Homo sapiens putative G-protein coup... 30 9.6
AB065786-1|BAC06005.1| 347|Homo sapiens seven transmembrane hel... 30 9.6
>BC069570-1|AAH69570.1| 456|Homo sapiens chromosome 6 open reading
frame 192 protein.
Length = 456
Score = 68.5 bits (160), Expect = 3e-11
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +3
Query: 459 LSGRQRLTLASLAIVDFMSFCSMSVMAPFFPREASSKGLSDTTCGMVFSFYAVIMFLTSP 638
LS Q L S A V+ S S++ PFFP+EA KG S+T GM+F +A+ L S
Sbjct: 29 LSREQVFVLISAASVNLGSMMCYSILGPFFPKEAEKKGASNTIIGMIFGCFALFELLASL 88
Query: 639 LFGKFLPAVGAKFMXTA 689
+FG +L +GAKFM A
Sbjct: 89 VFGNYLVHIGAKFMFVA 105
>AL137783-1|CAI19370.1| 456|Homo sapiens protein ( Human DNA
sequence from clone RP5-1181K21 on chromosome 6 Contains
the 5' end of the gene for a novel protein, the RPS12
gene for ).
Length = 456
Score = 68.5 bits (160), Expect = 3e-11
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +3
Query: 459 LSGRQRLTLASLAIVDFMSFCSMSVMAPFFPREASSKGLSDTTCGMVFSFYAVIMFLTSP 638
LS Q L S A V+ S S++ PFFP+EA KG S+T GM+F +A+ L S
Sbjct: 29 LSREQVFVLISAASVNLGSMMCYSILGPFFPKEAEKKGASNTIIGMIFGCFALFELLASL 88
Query: 639 LFGKFLPAVGAKFMXTA 689
+FG +L +GAKFM A
Sbjct: 89 VFGNYLVHIGAKFMFVA 105
>AL032821-1|CAI95705.1| 456|Homo sapiens protein ( Human DNA
sequence from clone RP1-55C23 on chromosome 6q22.3-23.3
Contains a pseudogene similar to part of hepatic
leukemia factor ).
Length = 456
Score = 68.5 bits (160), Expect = 3e-11
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +3
Query: 459 LSGRQRLTLASLAIVDFMSFCSMSVMAPFFPREASSKGLSDTTCGMVFSFYAVIMFLTSP 638
LS Q L S A V+ S S++ PFFP+EA KG S+T GM+F +A+ L S
Sbjct: 29 LSREQVFVLISAASVNLGSMMCYSILGPFFPKEAEKKGASNTIIGMIFGCFALFELLASL 88
Query: 639 LFGKFLPAVGAKFMXTA 689
+FG +L +GAKFM A
Sbjct: 89 VFGNYLVHIGAKFMFVA 105
>AL137783-2|CAI19371.1| 107|Homo sapiens protein ( otein, the RPS12
gene for ).).
Length = 107
Score = 48.8 bits (111), Expect = 3e-05
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +3
Query: 459 LSGRQRLTLASLAIVDFMSFCSMSVMAPFFPREASSKGLSDTTCGMVFSFYAVIMFLTSP 638
LS Q L S A V+ S S++ PFFP+EA KG S+T GM+F F TS
Sbjct: 29 LSREQVFVLISAASVNLGSMMCYSILGPFFPKEAEKKGASNTIIGMIFGFQ-----FTSW 83
Query: 639 LFGKFLPAVG 668
+ G +P G
Sbjct: 84 ICGTSIPGYG 93
>AL032821-2|CAI95706.1| 107|Homo sapiens protein ( of hepatic
leukemia factor ).).
Length = 107
Score = 48.8 bits (111), Expect = 3e-05
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +3
Query: 459 LSGRQRLTLASLAIVDFMSFCSMSVMAPFFPREASSKGLSDTTCGMVFSFYAVIMFLTSP 638
LS Q L S A V+ S S++ PFFP+EA KG S+T GM+F F TS
Sbjct: 29 LSREQVFVLISAASVNLGSMMCYSILGPFFPKEAEKKGASNTIIGMIFGFQ-----FTSW 83
Query: 639 LFGKFLPAVG 668
+ G +P G
Sbjct: 84 ICGTSIPGYG 93
>AK126810-1|BAC86703.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44860 fis, clone BRALZ2007661. ).
Length = 195
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 309 GGRSPPNSGRLRRTQSWSGDPNDDVSSEIRILRERLVRTQRKLHPGAFRLLSGRQR 476
G SPP + RR QS G P V R+LR + ++ LHP A RQR
Sbjct: 112 GPTSPPRPQKGRRAQSPWGFPKARVPRPSRLLRYPMALPRKGLHPQAPNSCLVRQR 167
>AY427820-1|AAR05120.1| 321|Homo sapiens G-protein coupled receptor
protein.
Length = 321
Score = 30.3 bits (65), Expect = 9.6
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +3
Query: 381 VSSEIRILRERLVRTQRKLHPGAFRLLSGRQRLTLASLAIVDFMSFCSMSVMAPFFPREA 560
++S + + + LV T K+H RL+ + L+ L + C +SV+ P + +
Sbjct: 79 MASTLSLETQPLVNTTDKVHELMKRLMYFAYTVGLSLLTAISTQR-C-LSVLFPIWFKCH 136
Query: 561 SSKGLSDTTCGMVFSFYAVIMFLTSPLFGKFL 656
+ LS CG++++ ++ LTS KFL
Sbjct: 137 RPRHLSAWVCGLLWTLCLLMNGLTSSFCSKFL 168
>AC016526-1|AAG38637.1| 482|Homo sapiens FLJ20689 protein.
Length = 482
Score = 30.3 bits (65), Expect = 9.6
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = -1
Query: 434 LSLCAHQSFSQYS-----DFRADIIVRVSRP*LCSSQSPRVWWGPSSAPCLRQISSMR 276
+S CAH+ F+ S D AD R P CS++ V WGP PC R I R
Sbjct: 363 ISACAHE-FNPLSPLYSLDVLADASHRRCSPAHCSARQANVHWGP---PCSRDIKRKR 416
>AB154410-1|BAD20638.1| 321|Homo sapiens G protein-coupled receptor
TGR7 protein.
Length = 321
Score = 30.3 bits (65), Expect = 9.6
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +3
Query: 381 VSSEIRILRERLVRTQRKLHPGAFRLLSGRQRLTLASLAIVDFMSFCSMSVMAPFFPREA 560
++S + + + LV T K+H RL+ + L+ L + C +SV+ P + +
Sbjct: 79 MASTLSLETQPLVNTTDKVHELMKRLMYFAYTVGLSLLTAISTQR-C-LSVLFPIWFKCH 136
Query: 561 SSKGLSDTTCGMVFSFYAVIMFLTSPLFGKFL 656
+ LS CG++++ ++ LTS KFL
Sbjct: 137 RPRHLSAWVCGLLWTLCLLMNGLTSSFCSKFL 168
>AB083627-1|BAB89340.1| 321|Homo sapiens putative G-protein coupled
receptor protein.
Length = 321
Score = 30.3 bits (65), Expect = 9.6
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +3
Query: 381 VSSEIRILRERLVRTQRKLHPGAFRLLSGRQRLTLASLAIVDFMSFCSMSVMAPFFPREA 560
++S + + + LV T K+H RL+ + L+ L + C +SV+ P + +
Sbjct: 79 MASTLSLETQPLVNTTDKVHELMKRLMYFAYTVGLSLLTAISTQR-C-LSVLFPIWFKCH 136
Query: 561 SSKGLSDTTCGMVFSFYAVIMFLTSPLFGKFL 656
+ LS CG++++ ++ LTS KFL
Sbjct: 137 RPRHLSAWVCGLLWTLCLLMNGLTSSFCSKFL 168
>AB065786-1|BAC06005.1| 347|Homo sapiens seven transmembrane helix
receptor protein.
Length = 347
Score = 30.3 bits (65), Expect = 9.6
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +3
Query: 381 VSSEIRILRERLVRTQRKLHPGAFRLLSGRQRLTLASLAIVDFMSFCSMSVMAPFFPREA 560
++S + + + LV T K+H RL+ + L+ L + C +SV+ P + +
Sbjct: 105 MASTLSLETQPLVNTTDKVHELMKRLMYFAYTVGLSLLTAISTQR-C-LSVLFPIWFKCH 162
Query: 561 SSKGLSDTTCGMVFSFYAVIMFLTSPLFGKFL 656
+ LS CG++++ ++ LTS KFL
Sbjct: 163 RPRHLSAWVCGLLWTLCLLMNGLTSSFCSKFL 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,109,190
Number of Sequences: 237096
Number of extensions: 2416836
Number of successful extensions: 12935
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12935
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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