Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M23
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67949-9|AAM69108.1|  486|Caenorhabditis elegans Hypothetical pr...    73   4e-13
U67949-8|AAD32274.1|  626|Caenorhabditis elegans Hypothetical pr...    73   4e-13
U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm recept...    30   2.5  
AL021503-7|CAI79271.1|  277|Caenorhabditis elegans Hypothetical ...    28   7.6  
AL021503-6|CAA16424.2|  459|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U67949-9|AAM69108.1|  486|Caenorhabditis elegans Hypothetical
           protein F55A4.8b protein.
          Length = 486

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 40/115 (34%), Positives = 63/115 (54%)
 Frame = +3

Query: 336 RLRRTQSWSGDPNDDVSSEIRILRERLVRTQRKLHPGAFRLLSGRQRLTLASLAIVDFMS 515
           RL   +S   + + D  S I    + +   +  LH      LS RQ L+++ L++ +  S
Sbjct: 40  RLSIKESEGSESDSDEESAISDEEQAVPFLKSALH--TVSALSSRQLLSISMLSLANLCS 97

Query: 516 FCSMSVMAPFFPREASSKGLSDTTCGMVFSFYAVIMFLTSPLFGKFLPAVGAKFM 680
             + S +APF+P EA  K LS+T  G+VF  +   MF+ SPLFGK++  +GA+ M
Sbjct: 98  TIAFSCIAPFYPAEAKLKNLSETQTGIVFGIFEFTMFIISPLFGKYIIFIGARTM 152


>U67949-8|AAD32274.1|  626|Caenorhabditis elegans Hypothetical
           protein F55A4.8a protein.
          Length = 626

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 40/115 (34%), Positives = 63/115 (54%)
 Frame = +3

Query: 336 RLRRTQSWSGDPNDDVSSEIRILRERLVRTQRKLHPGAFRLLSGRQRLTLASLAIVDFMS 515
           RL   +S   + + D  S I    + +   +  LH      LS RQ L+++ L++ +  S
Sbjct: 180 RLSIKESEGSESDSDEESAISDEEQAVPFLKSALH--TVSALSSRQLLSISMLSLANLCS 237

Query: 516 FCSMSVMAPFFPREASSKGLSDTTCGMVFSFYAVIMFLTSPLFGKFLPAVGAKFM 680
             + S +APF+P EA  K LS+T  G+VF  +   MF+ SPLFGK++  +GA+ M
Sbjct: 238 TIAFSCIAPFYPAEAKLKNLSETQTGIVFGIFEFTMFIISPLFGKYIIFIGARTM 292


>U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm receptor
           protein 135 protein.
          Length = 345

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 582 TTCGMVFSFYAVIMFLTSPLFGKFLPAVG 668
           T   M+  ++ V +F+T P+FGK +P +G
Sbjct: 259 TVIPMITMYFPVALFVTLPMFGKDIPYLG 287


>AL021503-7|CAI79271.1|  277|Caenorhabditis elegans Hypothetical
           protein Y68A4A.10b protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -2

Query: 475 RCRPLSSRNAPGCSFLCVRTNLSLNIRISELTSSFGSPDHDC 350
           +C   +  N+PGCS L V+  ++      ++T     P + C
Sbjct: 93  KCTATTGMNSPGCSTLSVKCTINAGFE-CDITKCMADPAYKC 133


>AL021503-6|CAA16424.2|  459|Caenorhabditis elegans Hypothetical
           protein Y68A4A.10a protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -2

Query: 475 RCRPLSSRNAPGCSFLCVRTNLSLNIRISELTSSFGSPDHDC 350
           +C   +  N+PGCS L V+  ++      ++T     P + C
Sbjct: 93  KCTATTGMNSPGCSTLSVKCTINAGFE-CDITKCMADPAYKC 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,598,138
Number of Sequences: 27780
Number of extensions: 371447
Number of successful extensions: 869
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)