Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M23
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   0.92 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.92 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.5  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 269 NINACWRFGGDMGRRKVPTKLGAIATNTIMVGR 367
           N+N   R   +   +  PT LGA+AT  + V R
Sbjct: 124 NVNNAARINWEYLDKYKPTPLGAVATEKMFVAR 156


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -2

Query: 649 FPNKGDVKNMMTA*KLNTIPHVVSDSP 569
           FP +  V+ +++   LN I H++++SP
Sbjct: 39  FPEENVVEELLSPLTLNRITHILANSP 65


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 361  DHDCVRRNRPE 329
            DHDC+R+ R +
Sbjct: 1647 DHDCIRQERTQ 1657


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,950
Number of Sequences: 438
Number of extensions: 4635
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)