Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M20
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   4.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.3  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 20/75 (26%), Positives = 32/75 (42%)
 Frame = +3

Query: 252 QGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAY 431
           + YQ  + D      + DD     FS S  TWL+     VN N      A++  +K   +
Sbjct: 406 ENYQTMSRDPARTPFQWDDSVSAGFSSSSNTWLR-----VNENYKTVNLAAEKKDKNSFF 460

Query: 432 IEHVTQKSDAAKKMP 476
             ++ +K  + KK P
Sbjct: 461 --NMFKKFASLKKSP 473


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 20/75 (26%), Positives = 32/75 (42%)
 Frame = +3

Query: 252 QGYQDHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAY 431
           + YQ  + D      + DD     FS S  TWL+     VN N      A++  +K   +
Sbjct: 406 ENYQTMSRDPARTPFQWDDSVSAGFSSSSNTWLR-----VNENYKTVNLAAEKKDKNSFF 460

Query: 432 IEHVTQKSDAAKKMP 476
             ++ +K  + KK P
Sbjct: 461 --NMFKKFASLKKSP 473


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 360 VWLVNNNLDYAAAASQPL 413
           +WL+ + LD+   AS PL
Sbjct: 679 IWLLGSRLDWEDHASSPL 696


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 154 TCDGGRGFNSEEILQRVQPAVCPR 225
           +C+G +GF    I Q++Q   C +
Sbjct: 83  SCEGCKGFFRRSIQQKIQYRPCTK 106


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 198 KGTAGRLSALEPRDISLHQGYQDHAEDIYNLEIRP 302
           +GT  R  A++   I +++  Q + E   N ++RP
Sbjct: 471 EGTVRRRVAVDRSGIDINEEIQRNREFYKNADVRP 505


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,272
Number of Sequences: 438
Number of extensions: 5076
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)