Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M18
         (951 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0621 - 4981070-4981136,4982906-4983825                           30   3.1  
02_04_0382 - 22501041-22501279,22501717-22501810                       29   4.1  
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440...    29   7.2  
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243...    29   7.2  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    29   7.2  

>11_01_0621 - 4981070-4981136,4982906-4983825
          Length = 328

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 696 GGGGXKKKXXP-PPXXXXGGGXKN 764
           GGGG KKK  P PP     GG KN
Sbjct: 211 GGGGGKKKVSPKPPAAAAAGGKKN 234


>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -3

Query: 811 NPPFSFXXGGXXKKKXFXXPPPXXXXGGGXXFFXXPPPP 695
           +PP S           +  PPP    GGG  +   PPPP
Sbjct: 64  DPPHSPDYYDPPPSPDYYDPPPSPYYGGGGGYGKPPPPP 102


>09_04_0684 -
           19442335-19442990,19443774-19443839,19443935-19444032,
           19444787-19445157
          Length = 396

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +1

Query: 340 QNLKNPPKPPFRGSXGXN--FNRGXPGXP*XNPPP 438
           Q  + PP PP     G N  +  G PG    NPPP
Sbjct: 317 QGYQGPPPPPPSAYQGNNPGYQGGGPGYQGGNPPP 351


>09_01_0165 -
           2436769-2437442,2438159-2438224,2438318-2438415,
           2439856-2440214
          Length = 398

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +1

Query: 340 QNLKNPPKPPFRGSXGXN--FNRGXPGXP*XNPPP 438
           Q  + PP PP     G N  +  G PG    NPPP
Sbjct: 308 QEYRGPPPPPPSAYQGNNPGYQGGGPGYHGGNPPP 342


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 754 PPPXXXXGGGXXFFXXPPP 698
           PPP    GGG  F+  PPP
Sbjct: 19  PPPQAGGGGGGEFYRGPPP 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,857,869
Number of Sequences: 37544
Number of extensions: 358940
Number of successful extensions: 429
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)