Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M12
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    30   2.1  
04_01_0486 - 6404315-6404333,6404803-6405260                           30   2.8  
03_04_0061 - 16949038-16950006                                         29   4.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.4  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 525 CWRFSIGSAPLTSITKIDAQVXGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 683
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>04_01_0486 - 6404315-6404333,6404803-6405260
          Length = 158

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
 Frame = -1

Query: 700 KGGQVSGK-RQGRNRRAHEGASRGKRLVSL*SCRVSPPXT*ASIFVMLVRGAEPMEKRQQ 524
           +GG   G+ R+GR R A  G  R +         VSPP     +  +   G     +R +
Sbjct: 53  RGGASGGRGRRGRQRAAQGGGGRQRARGGGEVAVVSPPGRSPPLRQIWQEGRRRQGRRAR 112

Query: 523 RGLFTVPGLLLAFCSHVLS 467
           RGL    G L+  C   L+
Sbjct: 113 RGLVVAGGGLVRRCGGELA 131


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
 Frame = +1

Query: 607 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRL------SPFGXAWRXLIAHAVGISV 756
           RT+K PG+   ++PRA+  + P  Y   VR       S  G  W+ L+A A+ ++V
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSASGIGWKNLVA-AMSLAV 309


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 357 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 512
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 306 NESAN---ARGEAVCVLGALPLPRSLTRCAR 389
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,182,109
Number of Sequences: 37544
Number of extensions: 445557
Number of successful extensions: 1257
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)