Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M11
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   2.1  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   2.1  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   3.7  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   4.9  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   4.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   8.6  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 869 PGSEPXMPSSTSLARGTRVACAS 801
           PG  P  PS++ + RG   A  S
Sbjct: 584 PGQSPDWPSTSQIQRGVNAAIRS 606


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/32 (21%), Positives = 14/32 (43%)
 Frame = -1

Query: 732 FRLLGTDWNSTFWTSSPLLRSQTRIVLSSLTL 637
           +RLL  DW    W      ++   +   ++T+
Sbjct: 107 YRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTI 138


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 251 YLISACKDGKPMLRQGETGDWIGTFEGHKGAVWGVALT 364
           +L   C  G P +RQG T   +G  +      +G+A++
Sbjct: 17  FLFDKCS-GYPSIRQGTTSYCLGCGDSCHKCKYGIAMS 53


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = -1

Query: 594 LVCPFIFSIGPASSLLRSKTR---ISFSLLAVTNNVSSALKLTLFTMCSCSKVWTISPYR 424
           ++ PF   + P+ SLL + TR   ++  ++A    V S+  + +  +     +  +S   
Sbjct: 53  VINPFFCDMSPSLSLLCADTRLNKLAVFIVAGAVGVFSSPTILISYIYILMAILRMSADG 112

Query: 423 ASHNFAVKSAAPLAAKFAF 367
              NF+  S+ P AA  ++
Sbjct: 113 GCRNFSTCSSHPTAAFISY 131


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 663 RIVLSSLTLTMRELFRNTAC 604
           R+VLS+ +   REL ++T C
Sbjct: 47  RVVLSACSPYFRELLKSTPC 66


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 787 KRYVCTVCNSQYGS 746
           K Y CT+C+  +GS
Sbjct: 258 KVYKCTLCHETFGS 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,938
Number of Sequences: 438
Number of extensions: 5712
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)