Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M09
         (907 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E47EF0 Cluster: PREDICTED: similar to coiled-coi...    33   7.6  
UniRef50_UPI0000DB73DE Cluster: PREDICTED: similar to bancal CG1...    33   7.6  

>UniRef50_UPI0000E47EF0 Cluster: PREDICTED: similar to coiled-coil
           domain containing 40, partial; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to coiled-coil domain
           containing 40, partial - Strongylocentrotus purpuratus
          Length = 1079

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 24/90 (26%), Positives = 30/90 (33%), Gaps = 1/90 (1%)
 Frame = +2

Query: 581 PPXXNXAPSXKQXXMEGGGXXPAXGXPTXXXXXXXXXXXPTXGSXXGVPXTPQIXXPPRX 760
           PP     PS  +    G G  P+ G P+           P  GS        +   PP  
Sbjct: 56  PPSATRTPSAGRPPSAGSGRPPSAGRPSSAARPPSAGARPASGSRRSGSGAQR---PPSG 112

Query: 761 EXXTPXPPEXSSAXRCPGRXGA-XTXVXGP 847
           E  +P PP+ S     P    A    V GP
Sbjct: 113 EKRSPVPPQASPTASPPATPPALQEEVTGP 142


>UniRef50_UPI0000DB73DE Cluster: PREDICTED: similar to bancal
           CG13425-PC, isoform C; n=2; Endopterygota|Rep:
           PREDICTED: similar to bancal CG13425-PC, isoform C -
           Apis mellifera
          Length = 420

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 23/76 (30%), Positives = 24/76 (31%)
 Frame = -1

Query: 448 GXGGXX*KKXXGGGGGXPPRXXXXXYLXXX*KXXXPPKRGXPXXXGXXXGKXXXFSXXXX 269
           G GG       GGGGG PPR           +   PP RG P   G   G          
Sbjct: 216 GPGGRGGGGGGGGGGGMPPRRDNRAGPGDMNRGFPPPPRGGPRGGGGGGGGMSGGPPDRG 275

Query: 268 XGXPXXXGRXGGPXTG 221
            G     G  GG   G
Sbjct: 276 YGGNSRGGGGGGGYEG 291


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,912,173
Number of Sequences: 1657284
Number of extensions: 6075794
Number of successful extensions: 16260
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15269
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)