Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M08
         (954 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D573ED Cluster: PREDICTED: similar to CG9395-PA;...    36   1.5  
UniRef50_Q00XU5 Cluster: Chromosome 12 contig 1, DNA sequence; n...    35   3.5  
UniRef50_Q8SZ40 Cluster: RE17942p; n=6; Diptera|Rep: RE17942p - ...    34   6.1  

>UniRef50_UPI0000D573ED Cluster: PREDICTED: similar to CG9395-PA;
           n=3; Endopterygota|Rep: PREDICTED: similar to CG9395-PA
           - Tribolium castaneum
          Length = 553

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +3

Query: 255 RARAISARAKERANISFFIFIMXFAVFG 338
           + + I+ R ++RAN+SFFI +M FAVFG
Sbjct: 8   KKKYINFRNRQRANMSFFIVVMFFAVFG 35


>UniRef50_Q00XU5 Cluster: Chromosome 12 contig 1, DNA sequence; n=1;
           Ostreococcus tauri|Rep: Chromosome 12 contig 1, DNA
           sequence - Ostreococcus tauri
          Length = 206

 Score = 34.7 bits (76), Expect = 3.5
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
 Frame = -2

Query: 278 ASRYRARSPLHRADINITWALDEKRPL----TRAPRYRLLSHHSLGPK---RHTTSCDEG 120
           + R+  R P  RA     WAL   R       R PR R+ + +S   +   +H+T+CD  
Sbjct: 47  SKRFERRRPSARAYHRTLWALHRSRSSIDSHARRPRSRVSTTNSPNARCVRKHSTACDRS 106

Query: 119 PRH 111
           PRH
Sbjct: 107 PRH 109


>UniRef50_Q8SZ40 Cluster: RE17942p; n=6; Diptera|Rep: RE17942p -
           Drosophila melanogaster (Fruit fly)
          Length = 572

 Score = 33.9 bits (74), Expect = 6.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -1

Query: 216 GRKAAANTRATLPTTESSQPGTEAPYH*L*RRPASQHDAFPQTS 85
           GR+AA N R T P T++S+P +  P       PAS  ++   TS
Sbjct: 161 GRRAAPNNRRTTPATQNSRPSSTIPQSTARNGPASTRNSRNSTS 204


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,985,250
Number of Sequences: 1657284
Number of extensions: 11096489
Number of successful extensions: 22979
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22968
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88182286632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)