Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M07
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0046 + 10114402-10114535,10116438-10117365                       52   6e-07
04_04_0873 - 28905240-28906061                                         46   4e-05
02_03_0238 + 16730444-16730448,16730484-16730586,16732043-167320...    30   2.8  
06_02_0017 - 10649527-10651183,10651264-10652363                       29   3.8  
10_06_0135 + 11108769-11108953,11109151-11109219,11109932-111100...    29   6.6  
01_05_0733 - 24707753-24707819,24708906-24709723                       28   8.7  

>04_03_0046 + 10114402-10114535,10116438-10117365
          Length = 353

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 41/162 (25%), Positives = 71/162 (43%)
 Frame = +1

Query: 139 ILAPVFTPMYEDGEVNYSVIANYLSFLKQKNINGILVGGTTGEAASLSLQERKDVLNTWL 318
           ++  V TP   DG  +     + ++        G++VGGTTGE   +S  E   ++   +
Sbjct: 56  VITAVKTPYLPDGRFDLEAYDSLINMQIDGGAEGVIVGGTTGEGHLMSWDEHIMLIGHTV 115

Query: 319 QSARRHKIKVIAQIGGIPLPDVIEMAQFAEDVEVDAIMTLPELYYKPRNVEQLVSYLETV 498
            +    K+KV+   G     + I   +    V + A + +   YY   ++E L+S+ E V
Sbjct: 116 -NCFGAKVKVVGNTGSNSTREAIHATEQGFAVGMHAALHI-NPYYGKTSIEGLISHFEAV 173

Query: 499 SKAAPTLPLIYYHFPMMSGVDLNMKRFFALASSRIPNFMGMK 624
               PT   I Y+ P  +G D+      A++S    N  G+K
Sbjct: 174 LPMGPT---IIYNVPSRTGQDIPPAVIEAVSS--FTNLAGVK 210


>04_04_0873 - 28905240-28906061
          Length = 273

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 38/129 (29%), Positives = 60/129 (46%)
 Frame = +1

Query: 238 GILVGGTTGEAASLSLQERKDVLNTWLQSARRHKIKVIAQIGGIPLPDVIEMAQFAEDVE 417
           G++VGGTTGE   +S  E   ++   + +    KIKV+   G     + I   +    V 
Sbjct: 9   GVIVGGTTGEGHLMSWDEHIMLIGHTV-NCFGTKIKVVGNTGSNSTREAIHATEQGFAVG 67

Query: 418 VDAIMTLPELYYKPRNVEQLVSYLETVSKAAPTLPLIYYHFPMMSGVDLNMKRFFALASS 597
           + A + +   YY   +VE L+S+ E V    PT   I Y+ P  +G D+      A++S 
Sbjct: 68  MHAALHI-NPYYGKTSVEGLISHFEAVLPMGPT---IIYNVPSRTGQDIPPAVIEAVSS- 122

Query: 598 RIPNFMGMK 624
              N  G+K
Sbjct: 123 -FSNMAGVK 130


>02_03_0238 +
           16730444-16730448,16730484-16730586,16732043-16732099,
           16732198-16732346,16732450-16732545,16732620-16732695,
           16732810-16732883,16732991-16733408
          Length = 325

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 26/91 (28%), Positives = 34/91 (37%)
 Frame = +3

Query: 225 EEHKRYPSWWYYRRSSISELARTERRTQHLATERKKAQNQGHRTDRRNTSA*CH*NGTIR 404
           EEHK   + W  R    + LA  E  TQ L      + + GH      T+A      T R
Sbjct: 206 EEHKNAGTGWMGRGRGNAALAAAETTTQLLTASSSSSSSYGHGAAGSRTAA-----ETQR 260

Query: 405 *RCGSRRHHDSTRTLLQAPKRRAAGLLFRDG 497
               S     S R  + AP+ R +     DG
Sbjct: 261 SSSSSSSRRGSRRADMVAPQSRNSRFDDSDG 291


>06_02_0017 - 10649527-10651183,10651264-10652363
          Length = 918

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +1

Query: 10  HYDXTIGNSLRFXVFFYSRSINDRCEVL*LFQIV*KMASNIEGILAPVFTPMYED 174
           HY     N  R+  FFYS SI+    ++ +  ++ +M +N+E  + P+ T +  D
Sbjct: 803 HYILHDINKRRYYAFFYSNSISFMASIVVIALLLPRMLNNLEIPVWPMHTAILLD 857


>10_06_0135 +
           11108769-11108953,11109151-11109219,11109932-11110067,
           11110632-11110879,11111329-11111555,11111665-11111780,
           11111875-11112051,11112459-11112647,11112754-11112816,
           11113239-11113358
          Length = 509

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +1

Query: 193 VIANYLSFLKQKNINGILVGGTTGEAASLS-LQERKDVLNTWLQSARRHKIKVIAQIGGI 369
           + A + S +   N N I+ GG    + +L+    R  VL+  LQ   RH ++ +  + G+
Sbjct: 120 IYAPFKSLVPMVNPNDIVFGGWDISSMNLADAMTRARVLDIDLQKQLRHHMESMVPLPGV 179

Query: 370 PLPDVIEMAQ 399
             PD I   Q
Sbjct: 180 YNPDFIAANQ 189


>01_05_0733 - 24707753-24707819,24708906-24709723
          Length = 294

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -3

Query: 395 AISMTSGRGIPPICAMTL-ILCLLALCSQVLSTSFRSCKLRDAASPVVPPTRIP 237
           A+++ +  GIP     T  +LCL  L       +  +C+ RD   PVV P  +P
Sbjct: 126 ALAVAAELGIPRYVFFTSNLLCLTTLLYTPELATTTACECRDLPEPVVLPGCVP 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,086,094
Number of Sequences: 37544
Number of extensions: 383728
Number of successful extensions: 1038
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)