Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M07
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   3.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.4  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +3

Query: 192 CDS*LFEFSKTEEHKRYPSWWYYR--RSSISELARTERRTQHLATERKKAQNQ 344
           CD  +     T++H   P++W+    ++ I  L+R E+ T       ++ Q +
Sbjct: 283 CDETMSRVFPTQDHTGRPAYWWTPAIQAMIDNLSRKEQMTMRTIPPEEQLQTE 335


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +1

Query: 55   FYSRSINDRCEVL*LFQIV*KMASNIEGILAPVFTPMYEDGEVNYSVIANYLSF 216
            FY  +  D+ E   LF      +S  E  +A    PM E+ + +Y +  +Y  F
Sbjct: 1069 FYRNADIDKNERDKLFDAFISYSSKDEAFVAEELAPMLENEDPSYKLCLHYRDF 1122


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 241 ILVGGTTGEAASLSLQERKDVLNTWLQS 324
           +L  G T EAAS   +E    +N W+++
Sbjct: 684 LLDPGITPEAASQRAEEAVSAVNLWMEN 711


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,530
Number of Sequences: 2352
Number of extensions: 15493
Number of successful extensions: 240
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)