Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M07
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32275-1|AAA75370.1|  982|Caenorhabditis elegans serine-threonin...    31   1.4  
U11280-5|AAA19437.1|  982|Caenorhabditis elegans Protein kinase ...    31   1.4  
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ...    28   7.7  
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ...    28   7.7  
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ...    28   7.7  
AF036706-3|ABD94091.1|  204|Caenorhabditis elegans Hypothetical ...    28   7.7  

>U32275-1|AAA75370.1|  982|Caenorhabditis elegans serine-threonine
           kinase protein.
          Length = 982

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -3

Query: 518 SVGAALDTVSK*ETSCSTFRGL**SSGRVMMASTSTSSANCAISMTSGRG 369
           S+G A D+ S    S ++FR +  S G  ++ ST+T+ A   +  +SG G
Sbjct: 353 SIGRAGDSASSRSASLTSFRSMQSSGGAGLLVSTNTTGAMDNVHGSSGYG 402


>U11280-5|AAA19437.1|  982|Caenorhabditis elegans Protein kinase
           protein 18, isoforma protein.
          Length = 982

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -3

Query: 518 SVGAALDTVSK*ETSCSTFRGL**SSGRVMMASTSTSSANCAISMTSGRG 369
           S+G A D+ S    S ++FR +  S G  ++ ST+T+ A   +  +SG G
Sbjct: 353 SIGRAGDSASSRSASLTSFRSMQSSGGAGLLVSTNTTGAMDNVHGSSGYG 402


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
            F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 428  MASTSTSSANCAISMTSGRGIPPICAMTLILCLLALCSQVL--STSFRSCKL 279
            M     S++   +S  SG GIP    +T I C++A+ +  L  +T    CKL
Sbjct: 2273 MTLNCNSASQWVVSSASGTGIPVGTVITSIACVVAISTTTLVPATVAAGCKL 2324


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 428  MASTSTSSANCAISMTSGRGIPPICAMTLILCLLALCSQVL--STSFRSCKL 279
            M     S++   +S  SG GIP    +T I C++A+ +  L  +T    CKL
Sbjct: 2273 MTLNCNSASQWVVSSASGTGIPVGTVITSIACVVAISTTTLVPATVAAGCKL 2324


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
            protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 428  MASTSTSSANCAISMTSGRGIPPICAMTLILCLLALCSQVL--STSFRSCKL 279
            M     S++   +S  SG GIP    +T I C++A+ +  L  +T    CKL
Sbjct: 2273 MTLNCNSASQWVVSSASGTGIPVGTVITSIACVVAISTTTLVPATVAAGCKL 2324


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 428  MASTSTSSANCAISMTSGRGIPPICAMTLILCLLALCSQVL--STSFRSCKL 279
            M     S++   +S  SG GIP    +T I C++A+ +  L  +T    CKL
Sbjct: 2273 MTLNCNSASQWVVSSASGTGIPVGTVITSIACVVAISTTTLVPATVAAGCKL 2324


>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 115 KMASNIEGI-LAPVFTPMYEDGEVNYSVIA-NYLSFLKQKNINGILVGGTTGEAASLSLQ 288
           K+ + +E I L    TP++E+GE++Y   + + ++ +K     G+ +      A SLS+Q
Sbjct: 489 KLQNAVEAIALCHNVTPIFENGEISYQAASPDEVALVKWTETVGVRLASRDLHAMSLSVQ 548


>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 115 KMASNIEGI-LAPVFTPMYEDGEVNYSVIA-NYLSFLKQKNINGILVGGTTGEAASLSLQ 288
           K+ + +E I L    TP++E+GE++Y   + + ++ +K     G+ +      A SLS+Q
Sbjct: 453 KLQNAVEAIALCHNVTPIFENGEISYQAASPDEVALVKWTETVGVRLASRDLHAMSLSVQ 512


>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 115 KMASNIEGI-LAPVFTPMYEDGEVNYSVIA-NYLSFLKQKNINGILVGGTTGEAASLSLQ 288
           K+ + +E I L    TP++E+GE++Y   + + ++ +K     G+ +      A SLS+Q
Sbjct: 492 KLQNAVEAIALCHNVTPIFENGEISYQAASPDEVALVKWTETVGVRLASRDLHAMSLSVQ 551


>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 115 KMASNIEGI-LAPVFTPMYEDGEVNYSVIA-NYLSFLKQKNINGILVGGTTGEAASLSLQ 288
           K+ + +E I L    TP++E+GE++Y   + + ++ +K     G+ +      A SLS+Q
Sbjct: 489 KLQNAVEAIALCHNVTPIFENGEISYQAASPDEVALVKWTETVGVRLASRDLHAMSLSVQ 548


>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 115 KMASNIEGI-LAPVFTPMYEDGEVNYSVIA-NYLSFLKQKNINGILVGGTTGEAASLSLQ 288
           K+ + +E I L    TP++E+GE++Y   + + ++ +K     G+ +      A SLS+Q
Sbjct: 453 KLQNAVEAIALCHNVTPIFENGEISYQAASPDEVALVKWTETVGVRLASRDLHAMSLSVQ 512


>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 115 KMASNIEGI-LAPVFTPMYEDGEVNYSVIA-NYLSFLKQKNINGILVGGTTGEAASLSLQ 288
           K+ + +E I L    TP++E+GE++Y   + + ++ +K     G+ +      A SLS+Q
Sbjct: 492 KLQNAVEAIALCHNVTPIFENGEISYQAASPDEVALVKWTETVGVRLASRDLHAMSLSVQ 551


>AF036706-3|ABD94091.1|  204|Caenorhabditis elegans Hypothetical
           protein T07A9.14 protein.
          Length = 204

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 216 SKTEEHKRYPSWWYYRRSSI-SELARTERRTQHLATE--RKKAQNQGHRTD 359
           +K EE+K+  S +Y RR+ + +E AR  RR +   T+  +K  ++ G   D
Sbjct: 111 AKEEEYKKNKSEYYKRRNEVKTEEARERRRVRDSETDAWKKAIRDAGQSPD 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,237,827
Number of Sequences: 27780
Number of extensions: 334607
Number of successful extensions: 833
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)