Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M06
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0119 - 12497422-12497889                                         31   1.6  
07_01_0153 - 1092242-1092285,1092710-1092865,1093004-1093754           29   6.6  

>09_03_0119 - 12497422-12497889
          Length = 155

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -1

Query: 162 LSASGSGALEHDPCCLYRGTIGSTTSWASLVIDASVVHQNL 40
           L+ASG GALE DP  +  G  GS  S AS V   +  H  L
Sbjct: 4   LTASGGGALEADPMEVGGGDPGSVKSGASWVDLTAARHHRL 44


>07_01_0153 - 1092242-1092285,1092710-1092865,1093004-1093754
          Length = 316

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 150 GSGALEHDPCCLYRGTIGSTTSWASLVIDASV 55
           G+G  +H   C+Y    G  +S AS+V+D+ V
Sbjct: 168 GTGRHDHSWACVYSSKTGEWSSQASIVLDSYV 199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,604,421
Number of Sequences: 37544
Number of extensions: 317924
Number of successful extensions: 709
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)