Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_M05
(964 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.17
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.17
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 34 0.17
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 34 0.17
AF039048-6|AAB94235.1| 91|Caenorhabditis elegans Hypothetical ... 33 0.23
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 33 0.30
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.53
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.53
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.70
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 0.92
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.92
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 31 0.92
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 31 0.92
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 26 2.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 30 2.8
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 28 8.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.6
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 28 8.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.6
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 8.6
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 28 8.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.6
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
G G G G GF GG+ F G N GG F GG GG G
Sbjct: 19 GSGGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKAGGSG 73
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -2
Query: 804 KRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
K G GGF GG F G N GG F GG GG G
Sbjct: 15 KTGFGSGGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSG 63
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = -2
Query: 858 GKKRGXXIXXEXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXG 679
G G GG G G GF GG F G N G F G
Sbjct: 27 GNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKAGGSGFGGGNTCGSGFGG 86
Query: 678 GXXGG---GGA 655
G GG GGA
Sbjct: 87 GSTGGSPYGGA 97
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
G G G G GF GG+ F G N GG F GG GG G
Sbjct: 19 GSGGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSG 73
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -2
Query: 804 KRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
K G GGF GG F G N GG F GG GG G
Sbjct: 15 KTGFGSGGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSG 63
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = -2
Query: 858 GKKRGXXIXXEXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXG 679
G G GG G G GF GG F G N G F G
Sbjct: 27 GNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGG 86
Query: 678 GXXGG---GGA 655
G GG GGA
Sbjct: 87 GSTGGSPYGGA 97
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
G G G G GF GG+ F G N GG F GG GG G
Sbjct: 19 GSGGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSG 73
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -2
Query: 804 KRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
K G GGF GG F G N GG F GG GG G
Sbjct: 15 KTGFGSGGGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSG 63
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = -2
Query: 858 GKKRGXXIXXEXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXG 679
G G GG G G GF GG F G N G F G
Sbjct: 27 GNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGG 86
Query: 678 GXXGG---GGA 655
G GG GGA
Sbjct: 87 GSTGGSPYGGA 97
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG GG+ GG + G P GG GG GGG
Sbjct: 190 GGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYGMGGG 244
Score = 33.1 bits (72), Expect = 0.30
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = -2
Query: 819 GGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGG-XFFXGGXXGGGG 658
GG G GG GG+ GG F GG GG + GG GGGG
Sbjct: 138 GGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGG 192
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -2
Query: 828 EXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
+ GGG G GG GG+ GG + GG GG + GG GGGG
Sbjct: 104 DFGGGMGG--GGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGG-YGMGGYGGGGG 157
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GG G GG +GG+ GG F GG GG + GG GGGG
Sbjct: 84 GGAFGGFNGGYGQGGYGGG----GDFGGGMGG------GGYGGGGYGGGGDGGGG 128
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GG G GG GG+ GG + G GG GG GGGG
Sbjct: 150 GGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGG 204
>AF039048-6|AAB94235.1| 91|Caenorhabditis elegans Hypothetical
protein F16B4.4 protein.
Length = 91
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = -2
Query: 864 PXGKKRGXXIXXEXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFF 685
P G R GG G G +GGF GG + F GG GG F
Sbjct: 19 PGGYGRPAGGYGPPSGGYGAPGGYNNQGGFDGGSQ-----FGGDGGFQQGGGFQQGGQFQ 73
Query: 684 XGGXXGGGG 658
GG GGG
Sbjct: 74 QGGFNQGGG 82
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 33.1 bits (72), Expect = 0.30
Identities = 29/96 (30%), Positives = 30/96 (31%)
Frame = -2
Query: 945 GGGXQXXXXGXXXXXXGXXRKRXXPFXPXGKKRGXXIXXEXGGGXGXKRGGXXEGGFXGG 766
GGG G G R F G RG GG G G GG GG
Sbjct: 63 GGGGFNGNGGFNGGGRGGGRGGNGGFGDNGGLRGGN-GGGRGGNGGFDDNGGGRGGNGGG 121
Query: 765 EKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
F + GG N GG GG GGG
Sbjct: 122 RGGTGGFGDNGGGRGG----NGGGRGGNGGGNNGGG 153
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/68 (33%), Positives = 25/68 (36%)
Frame = -2
Query: 864 PXGKKRGXXIXXEXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFF 685
P +KRG GGG G GG GG GG GG GG +
Sbjct: 64 PNREKRGYA-QYGGGGGYGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYG 122
Query: 684 XGGXXGGG 661
GG GGG
Sbjct: 123 GGGGGGGG 130
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.53
Identities = 22/55 (40%), Positives = 22/55 (40%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG GG GG GG PP GG GG GGGG
Sbjct: 27 GGGGGGGCGGGCGGGCGGG-----------GGCAPPPAPCGGGCGGGGGGCGGGG 70
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG GG GG GG GG GG GGGG
Sbjct: 132 GGGGGGGCGGGSSGGCGGGSS------GGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/55 (38%), Positives = 22/55 (40%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG GG GG S GG + GG GG GGGG
Sbjct: 156 GGGGGGGCGGGGGGGCGGG---------SSGGGGYAVAPSGGGGCGGGGSSGGGG 201
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXF-FXGGXXGGGG 658
GG G GG GG+ G + GG A GG G GGGG
Sbjct: 239 GGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGG 294
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 523 GGXXPSPTPKXRGXGFXGGGXGXGAXXQNP 434
GG P P P G G GGG G G P
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 658 PPPPXXAPXKKXPPPIXXGGG 720
PPPP P P P+ GGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.53
Identities = 22/55 (40%), Positives = 22/55 (40%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG GG GG GG PP GG GG GGGG
Sbjct: 27 GGGGGGGCGGGCGGGCGGG-----------GGCAPPPAPCGGGCGGGGGGCGGGG 70
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG GG GG GG GG GG GGGG
Sbjct: 132 GGGGGGGCGGGSSGGCGGGSS------GGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/55 (38%), Positives = 22/55 (40%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG GG GG S GG + GG GG GGGG
Sbjct: 156 GGGGGGGCGGGGGGGCGGG---------SSGGGGYAVAPSGGGGCGGGGSSGGGG 201
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXF-FXGGXXGGGG 658
GG G GG GG+ G + GG A GG G GGGG
Sbjct: 239 GGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGG 294
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 523 GGXXPSPTPKXRGXGFXGGGXGXGAXXQNP 434
GG P P P G G GGG G G P
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 658 PPPPXXAPXKKXPPPIXXGGG 720
PPPP P P P+ GGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGG 322
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -2
Query: 819 GGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GG G RGG GG GG + GG N GG GG GG
Sbjct: 53 GGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGG 106
Score = 31.5 bits (68), Expect = 0.92
Identities = 24/72 (33%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Frame = -2
Query: 858 GKKRGXXIXXEXGGGXGXKRGGXXEGGFXG---GEKXRXXFFXSXGGXXAPPXXNXGGXF 688
G RG GGG GG +GG+ G G G PP N GG +
Sbjct: 98 GGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDW 157
Query: 687 --FXGGXXGGGG 658
GG GGGG
Sbjct: 158 GGNGGGGRGGGG 169
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = -2
Query: 828 EXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
+ GG G RGG G + G + G N GG GG GGGG
Sbjct: 87 DWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGG---GGGGRGGGG 140
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG GG G ++ R + GG GG + GG GGGG
Sbjct: 222 GGGGGYGSGGGWGGGGGGRDRDRGGW-GGGGGGRGYGGGGGGGGYGYGG--GGGG 273
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -2
Query: 822 GGGXGXKRGGXXEG-GFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG G G+ GG R GG GG G GGGG
Sbjct: 217 GGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGG 272
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.92
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 370 PXXGGXGXVXXPXIXPXPPGKRGFVXXPPXXFPPQXTXSPGXLG 501
P GG G P PPG G PP FPP PG G
Sbjct: 425 PPQGGPGG-----FGPPPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 31.5 bits (68), Expect = 0.92
Identities = 24/63 (38%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -2
Query: 822 GGGXGXKRG-GXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGGALXX 646
GGG G + G G GGF GG F GG P GG GG GG A
Sbjct: 261 GGGRGGRGGRGGFRGGFRGGRGG----FGGPGG----PMGGRGGMGGMGGRGRGGQAAGV 312
Query: 645 KNP 637
NP
Sbjct: 313 HNP 315
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.92
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -2
Query: 858 GKKRGXXIXXEXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXG 679
G G GG G G GF GG F G N GG F
Sbjct: 91 GNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTGFGSGNAGGTGLGSGNAGGTGFGS 150
Query: 678 GXXGGGG 658
G GG G
Sbjct: 151 GNAGGTG 157
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GG G GG GG GG R GG GG GG GGGG
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGR----GGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G G GG GG GG GG GG GGGG
Sbjct: 65 GGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG 119
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKX---RXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
GGG G GG GG GG R GG GG GG GGGG
Sbjct: 69 GGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
G G G RGG GG + GG GG GG GGGG
Sbjct: 61 GSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGG 115
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 656 APPPPXXPPXKNXPPXFXXGGANXPPXEXKXXXRXFSPPXKPPS 787
+PPPP PP K PP G PP P PP+
Sbjct: 236 SPPPP--PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT 277
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 656 APPPPXXPPXKNXPPXFXXGGANXPPXEXKXXXRXFSPPXKPPS 787
+PPPP PP K PP G PP P PP+
Sbjct: 257 SPPPP--PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT 298
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 656 APPPPXXPPXKNXPPXFXXGGANXPPXEXKXXXRXFSPPXKPPS 787
+PPPP PP K PP G PP P PP+
Sbjct: 242 SPPPP--PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT 283
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 810 GXKRGGXX-EGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGG 658
G +RGG GGF GG GG G F GG GGGG
Sbjct: 292 GGERGGRGGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGG 343
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/55 (36%), Positives = 22/55 (40%)
Frame = -2
Query: 819 GGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGGA 655
GG G RGG GGF GG++ GG G F G GGG A
Sbjct: 339 GGGGGFRGGD-RGGFRGGDRGGFR-GGDRGGFRGGDRGGDRGGFRGGRGVGGGNA 391
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 25.8 bits (54), Expect(2) = 2.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 640 VFSXKGPPPPXXAPXKKXPPPIXXGGGXXPP 732
+F+ PPPP PPP G G PP
Sbjct: 701 MFNLNAPPPPGIPGYPPAPPP--PGVGPPPP 729
Score = 22.6 bits (46), Expect(2) = 2.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 844 PPFFPXWGKGXXPFSXXPXPXXG 912
PP P +G+G P S P P G
Sbjct: 756 PP--PPFGRGAGPMSSFPPPPRG 776
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/58 (39%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNX---GGXFFXGGXXGGGG 658
GGG G GG GG GG GG APP GG GG GGGG
Sbjct: 26 GGGGGGCGGGCGGGGGCGGG-------GGCGGGCAPPPPPPACGGGCGGGGGGCGGGG 76
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 523 GGXXPSPTPKXRGXGFXGGGXGXG 452
GG P P P G G GGG G G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCG 73
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 523 GGXXPSPTPKXRGXGFXGGGXGXG 452
GG P P P G G GGG G G
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCG 130
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/66 (30%), Positives = 25/66 (37%)
Frame = -2
Query: 858 GKKRGXXIXXEXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXG 679
G +G GG G + GG GG GGE + + G + GG G
Sbjct: 176 GGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGE--QGGWGGQGGSQGGSQGGSQGGWGNQG 233
Query: 678 GXXGGG 661
G GGG
Sbjct: 234 GQQGGG 239
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 819 GGXGXKRGGXXEGGFXGGEKXRXXFFXS-XGGXXAPPXXNXGGXFFXGGXXGGGG 658
GG G +GG GG GG + + S GG GG GG GGGG
Sbjct: 146 GGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGG--QGGNQGGGG 198
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 489 GGXGXLGGEXXRGPXNKTPFPGGGG 415
GG G GG RGP + P P GGG
Sbjct: 13 GGAGGGGGGPPRGPPQQPPQPQGGG 37
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 584 LTXXPKXXQXP*KTXPFXGFFXXRAPPPPXXPPXKNXPPXFXXGGANXP 730
LT P P FF PPPP PP P GG P
Sbjct: 472 LTSQAAPAPSPKAQYPTGVFFNQPLPPPPAHPPKIGAHPLVMGGGGGVP 520
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/65 (30%), Positives = 23/65 (35%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGGGALXXK 643
GGG G + +GG GG S GG A GG GGGG +
Sbjct: 266 GGGGGYPQPPPQQGGGGGGAGGMFRNILSSGGGAAAGSMLGRFLSNRGGGGGGGGGMGGG 325
Query: 642 NPXXG 628
N G
Sbjct: 326 NRGYG 330
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -2
Query: 864 PXGKKRGXXIXXEXGGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFF 685
P G G G G G GG GG GG S GG N GG
Sbjct: 782 PTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNS----NSGGGGGNGGGGNGGGGNG 837
Query: 684 XGGXXGGG 661
GG G G
Sbjct: 838 NGGGAGDG 845
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 653 RAPPPPXXPPXKNXPPXFXXGG 718
R PPPP PP PP F G
Sbjct: 118 RRPPPPWGPPPPGPPPPFGWRG 139
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 656 APPPPXXPPXKNXPPXF 706
APPPP PP +N P F
Sbjct: 475 APPPPPPPPPENEPEEF 491
>Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical
protein K02E11.10 protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 822 GGGXGXKRGGXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXGGXFFXGGXXGGG 661
GG G GGF G F GG A P G GG GGG
Sbjct: 86 GGSYAAPALGGGLGGFGGAPAPAPAFGGLGGGYQAAPALGGGLGGGLGGGPGGG 139
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 610 KXLKNXPXSGVFSXKGPPPPXXAPXKKXPP 699
K K SG S + PPPP AP PP
Sbjct: 36 KPKKKKDVSGAPSAESPPPPPPAPKVPEPP 65
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 628 PXSGVFSXKGPPPPXXAPXKKXPPPIXXGGGXXPP 732
P SG PPP P PPP GG PP
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 628 PXSGVFSXKGPPPPXXAPXKKXPPPIXXGGGXXPP 732
P SG PPP P PPP GG PP
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 499 PKXRGXGFXGGGXGXGAXXQNPFSRGG 419
P RG GF G G G G Q RGG
Sbjct: 455 PVMRGRGFGGAGGGAGNHGQRGGQRGG 481
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 628 PXSGVFSXKGPPPPXXAPXKKXPPPIXXGGGXXPP 732
P SG PPP P PPP GG PP
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Frame = -2
Query: 822 GGGXGXKRG--GXXEGGFXGGEKXRXXFFXSXGGXXAPPXXNXG---GXFFXGGXXGG 664
GGG G + G G GGF GG++ R G P G G F G GG
Sbjct: 28 GGGGGFRGGDRGRSPGGFRGGDRGRSSSGFRGGDRGRSPGGFRGDREGGFSPRGRGGG 85
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -2
Query: 858 GKKRGXXIXXEXGGGXGXKRGGXXEGGFXGGEK 760
G RG GGG RGG GGF GG +
Sbjct: 541 GGDRGGFRGRGGGGGFRGGRGGDRGGGFRGGRR 573
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +1
Query: 616 LKNXPXSGVFSXKGPPPPXX---APXKKXPPPIXXGG 717
++ P G+ +G PPP +P + PPP+ GG
Sbjct: 1453 MRGMPPLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGG 1489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,839,922
Number of Sequences: 27780
Number of extensions: 172315
Number of successful extensions: 1742
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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