Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M03
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1514 - 37892552-37893074,37893291-37893367,37893471-378935...    31   1.2  
12_01_0142 - 1093127-1093336,1093519-1093731,1093819-1093962,109...    30   2.8  

>01_06_1514 -
           37892552-37893074,37893291-37893367,37893471-37893587,
           37893826-37893926,37895077-37895146,37895318-37895415,
           37896326-37896419,37896792-37896882,37897222-37897547,
           37898193-37898278,37899078-37899417
          Length = 640

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/89 (22%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +3

Query: 249 K*CCRMASLKEMSVKHIRKKWGYTYDMYRIAKRNKNKVWKYYKIFDKNFSTSKTLDKY-D 425
           K C  M +L + S+KH+++   ++  +  +  ++ +++ K Y   DK F++ +T   +  
Sbjct: 205 KGCNLMRALSKESIKHLKEVVLHSEGVQNLISKDMDELLKIYAA-DKRFASERTPQHHLK 263

Query: 426 SWSDEWRLKLVXCISETKGLKLDFHTMWR 512
             ++    +LV C+  T  L  + H + R
Sbjct: 264 EEAESVMQQLVTCVQCTAELYHEMHALDR 292


>12_01_0142 -
           1093127-1093336,1093519-1093731,1093819-1093962,
           1094202-1094312,1094935-1094956,1095457-1095701
          Length = 314

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
 Frame = +3

Query: 135 WQRKLLFGLQSVHTDF*NCGFKMIGCLKKRSSRGQNLGK*CCRMASL-KEMSVKHIRKKW 311
           W+ K+   LQSV   F  C   M+G +  R++R   L K    + +  ++   K I +K 
Sbjct: 211 WELKIAHDLQSVPWRF--CRL-MLG-IYYRNNRLDTLVKLFKNLEACGRKPPSKDIVRKV 266

Query: 312 GYTYDMYRIAKRNKNKVWKYYKIFDKNFSTSK 407
             TY+M  + +  K  + KY ++FDK  S  +
Sbjct: 267 EDTYEMLGLVEEKKELLEKYKELFDKPSSNDR 298


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,525,511
Number of Sequences: 37544
Number of extensions: 244461
Number of successful extensions: 459
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)