Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M02
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         32   0.74 
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969...    29   4.0  
04_03_0904 + 20717005-20718087                                         29   5.2  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 778  VXSPPNPGPVLHETPPXQTPXPXXP 852
            V SPP P PV+   PP ++P P  P
Sbjct: 1197 VKSPPPPAPVISPPPPVKSPPPPAP 1221



 Score = 31.9 bits (69), Expect = 0.74
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 778  VXSPPNPGPVLHETPPXQTPXPXXP 852
            V SPP P PV+   PP ++P P  P
Sbjct: 1229 VKSPPPPAPVISPPPPEKSPPPAAP 1253



 Score = 31.5 bits (68), Expect = 0.98
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 778  VXSPPNPGPVLHETPPXQTPXPXXP 852
            + SPP P PV+   PP ++P P  P
Sbjct: 1165 IKSPPPPAPVISPPPPVKSPPPPAP 1189



 Score = 31.1 bits (67), Expect = 1.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 778  VXSPPNPGPVLHETPPXQTPXPXXP 852
            V SPP P PV+   PP ++P P  P
Sbjct: 1181 VKSPPPPAPVILPPPPVKSPPPPAP 1205



 Score = 31.1 bits (67), Expect = 1.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 778  VXSPPNPGPVLHETPPXQTPXPXXP 852
            V SPP P PV+   PP ++P P  P
Sbjct: 1213 VKSPPPPAPVILPPPPVKSPPPPAP 1237



 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 745  PCXGISSSGCXVXSPPNPGPVLHETPPXQTPXPXXP 852
            P   +SS      SPP P PV+   PP ++P P  P
Sbjct: 1138 PPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAP 1173


>01_06_1678 -
           39095986-39096205,39096400-39096477,39096578-39096949,
           39097374-39097671,39097867-39098077,39098331-39099023
          Length = 623

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +1

Query: 745 PCXGISSSGCXVXSPPNPGPV---LHETPPXQTPXPXXP 852
           P    +S+   + +PP P PV   LH  PP   P P  P
Sbjct: 56  PPSSSASTAAPLPAPPTPSPVPEHLHHHPPPPPPVPPCP 94


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 790 PNPGPVLHETPPXQTPXPXXPF 855
           P P P  H+ PP  TP P  P+
Sbjct: 339 PTPTPPYHKPPPSYTPGPPPPY 360



 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +1

Query: 784 SPPNPGPVLHETPPXQTPXPXXPFXXXXLSGLXGPXP 894
           SP  P P    TPP  TP P  P+     S   GP P
Sbjct: 324 SPYTPKPT--PTPPTYTPTPTPPYHKPPPSYTPGPPP 358


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 355 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 510
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 304 NESAN---ARGEAVCVLGALPLPRSLTRCAR 387
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,218,351
Number of Sequences: 37544
Number of extensions: 470025
Number of successful extensions: 1454
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)