Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M02
         (927 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    31   1.5  
AF098992-14|AAD34669.1|  346|Caenorhabditis elegans Hypothetical...    29   4.7  
Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/54 (35%), Positives = 22/54 (40%)
 Frame = +1

Query: 760  SSSGCXVXSPPNPGPVLHETPPXQTPXPXXPFXXXXLSGLXGPXPGXXPXLFSP 921
            SSS      PP P P   +  P   P P  P      +G+  P P   P LFSP
Sbjct: 1333 SSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVP-PPPPLFSP 1385


>AF098992-14|AAD34669.1|  346|Caenorhabditis elegans Hypothetical
           protein F53C3.13a protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 136 VQTHQCILSCLDPINPXLKGDPRPXVPTI 50
           V T   I+S +DP N  LK +P+  VPT+
Sbjct: 302 VSTQHVIVSEVDPANQRLKTNPKDTVPTM 330


>Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical
           protein F58G1.1 protein.
          Length = 965

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = -2

Query: 215 IMVTNKAIASQISQIKHFFHCILVVVCPNSSMYLIMSGSN*PSXKGRSAAAGTNNLNLKE 36
           +++T K  A+QIS        + V VC +    L++ G + P+ K  +A  G N +N+K+
Sbjct: 459 LILTGKN-AAQISSDNEVLGKMGVSVCEDP---LMVKGRSIPAVKLANAEIGANPINVKD 514

Query: 35  FPYKXNR 15
             ++ NR
Sbjct: 515 NKWRANR 521


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,268,849
Number of Sequences: 27780
Number of extensions: 356619
Number of successful extensions: 961
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)