Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_M01
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0871 - 20441689-20441756,20442220-20442349,20442422-204425...    52   6e-07
02_01_0469 - 3359156-3359500,3359595-3359680,3359766-3359811,335...    44   2e-04
02_04_0100 - 19730137-19730237,19731215-19731344,19731419-197315...    43   3e-04
08_02_0250 + 14772746-14773037,14773141-14773203,14773458-147736...    30   2.9  

>04_03_0871 -
           20441689-20441756,20442220-20442349,20442422-20442507,
           20444271-20444316,20444425-20444547,20445302-20445370
          Length = 173

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 27/54 (50%), Positives = 30/54 (55%)
 Frame = +1

Query: 46  ILEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTP 207
           + ++CK LGITALHIKLRA            AQ          MKIGRIEDVTP
Sbjct: 103 VAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTP 156


>02_01_0469 -
           3359156-3359500,3359595-3359680,3359766-3359811,
           3359897-3360016,3360622-3360624
          Length = 199

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 29/75 (38%), Positives = 34/75 (45%)
 Frame = +1

Query: 46  ILEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPXTIRLY 225
           + ++CK LGITALHIKLRA            AQ          MKIGRI       I+  
Sbjct: 80  VAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIGKFRVSLIQ-- 137

Query: 226 P*EGWPKRTQAVICF 270
                PK  + VICF
Sbjct: 138 -----PKDIEIVICF 147


>02_04_0100 -
           19730137-19730237,19731215-19731344,19731419-19731504,
           19732410-19732455,19732558-19732680,19732779-19732781
          Length = 162

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 23/51 (45%), Positives = 26/51 (50%)
 Frame = +1

Query: 46  ILEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIED 198
           + ++CK LGITALHIKLRA            AQ          MKIGRI D
Sbjct: 81  VAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIAD 131


>08_02_0250 +
           14772746-14773037,14773141-14773203,14773458-14773621,
           14774126-14774220,14774517-14774728,14774972-14775009,
           14775131-14775424,14775510-14775617
          Length = 421

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 78  GLAHKAPCYWWKQNKDPWSWCSVCTSGSCSFKYEDWP 188
           G  H  PC+ W    + W WC    SG C   +  WP
Sbjct: 345 GKPHGWPCWGW-DGAEMWLWCQSKNSGHC---HIGWP 377


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,628,595
Number of Sequences: 37544
Number of extensions: 169004
Number of successful extensions: 314
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)