Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_L17
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 60 3e-10
SPAC11E3.09 |pyp3||protein-tyrosine phosphatase Pyp3|Schizosacch... 56 7e-09
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 39 0.001
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 29 0.89
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 27 4.8
SPAC23C11.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 4.8
>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 60.5 bits (140), Expect = 3e-10
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 506 RGPLAFTVGHFWLMVWE--QNSRAVLMLNKVIEKNEIKCHWYWPHGNGEQHKMLLTDVNL 679
+G ++ ++ FW MVW+ +N ++ML + E C YWP NG K + D
Sbjct: 341 QGSISRSISDFWHMVWDNVENIGTIVMLGSLFEAGREMCTAYWP-SNGIGDKQVYGDY-- 397
Query: 680 SVEQISEEECPN--YSIRVLKLCDLESSESREVIQFHYTTWPDFGVPSSPHAFLEYLKKI 853
V+QISEE N + +R ++ + ++V + Y W D P + + +E+LK +
Sbjct: 398 CVKQISEENVDNSRFILRKFEIQNANFPSVKKVHHYQYPNWSDCNSPENVKSMVEFLKYV 457
Query: 854 RDA 862
++
Sbjct: 458 NNS 460
Score = 43.2 bits (97), Expect = 5e-05
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Frame = +1
Query: 322 SVKSSRYTCVEAKRPHNKALNRYRDVNPYDHSRIVLQR---SENDYINANLVRMESADRQ 492
S ++S+++ V++ + NRY D+ PY+ +R+ L+R SE DYINA+ ++ E+++
Sbjct: 279 SDRNSQWSTVDSLSNTSYKKNRYTDIVPYNCTRVHLKRTSPSELDYINASFIKTETSN-- 336
Query: 493 YILTQGT 513
YI QG+
Sbjct: 337 YIACQGS 343
>SPAC11E3.09 |pyp3||protein-tyrosine phosphatase
Pyp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 303
Score = 56.0 bits (129), Expect = 7e-09
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +2
Query: 506 RGPLAFTVGHFWLMVWEQ--NSRAVLMLNKVIEKNEIKCHWYWPHGNGEQHKMLLTDVNL 679
+GP + ++ FW MVW+ S ++ML K+ E++ +KC YWP E + + D+++
Sbjct: 96 QGPTSNSIDVFWKMVWQSVPKSGIIVMLTKLRERHRLKCDIYWPVELFET--LNIGDLSV 153
Query: 680 SVEQISEEECPNYSIRVLKLCDLESSESREVIQFHYTTWPDFGVP 814
+ ++ N ++V + + ++++ F+Y WPDFG P
Sbjct: 154 ILVKVYTLTSLN-EVQVREFELNKDGVKKKILHFYYNGWPDFGAP 197
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Frame = +1
Query: 376 ALNRYRDVNPYDHSRIVLQ---RSENDYINANLVRMESADRQYILTQG 510
A NRY ++ PY+++R+ L + DYINA++V++ S + +I TQG
Sbjct: 51 ARNRYSNIVPYENTRVRLDPMWKEACDYINASIVKIPSG-KTFIATQG 97
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 38.7 bits (86), Expect = 0.001
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +2
Query: 506 RGPLAFTVGHFWLMVWEQNSR--AVLMLNKVIEKNEIKCHWYWPHGNGEQHKMLLT-DVN 676
+ P T+ FW MVW + ++ML + E KC YWP + + H + L +
Sbjct: 503 QAPKPGTLLDFWEMVWHNSGTNGVIVMLTNLYEAGSEKCSQYWP--DNKDHALCLEGGLR 560
Query: 677 LSVEQISEEECPNYSIRVLKLCDLESSESREVIQFHYTTWPD 802
+SV++ E + + +L D + + + F TW D
Sbjct: 561 ISVQKYETFEDLKVNTHLFRL-DKPNGPPKYIHHFWVHTWFD 601
Score = 33.5 bits (73), Expect = 0.041
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +1
Query: 334 SRYTCVEAKRPHN-KALNRYRDVNPYDHSRI--VLQRSENDYINANLVRMESADRQYILT 504
S + C+ + R + NRY D+ PYD +R+ + + +DYINA+ ++ +++YI
Sbjct: 445 SDWCCLASSRSTSISRKNRYTDIVPYDKTRVRLAVPKGCSDYINAS--HIDVGNKKYIAC 502
Query: 505 Q 507
Q
Sbjct: 503 Q 503
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 734 KLCDLESSESREVIQFHYTTWPDFGVPSSPHAFLEYL 844
KLC S+S E ++ + + DFG+PSS +++L
Sbjct: 189 KLCGFSFSQSVESARYEFNDY-DFGIPSSLQQSMDFL 224
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +1
Query: 355 AKRPHNKALNRYRDVNPYDHSRIVLQRSENDYINANLVRMESADRQYILTQGTACVHRR 531
++ P N R NP + SR R E D AN R+ ++ Y T G + R+
Sbjct: 575 SRLPENLPTTRSSSNNPIEASRPPFSRDEQDISKANDFRVSASSAVY--TVGPELLQRK 631
>SPAC23C11.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 110
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 8 SYDLTIGNSLRFWSFTPLEVLVLPIS 85
++DL SL + +TPLE L+ PIS
Sbjct: 25 TWDLKASKSLARFPYTPLESLLAPIS 50
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,511,037
Number of Sequences: 5004
Number of extensions: 68662
Number of successful extensions: 206
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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