Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_L10
         (984 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1326 - 29355467-29355817                                         31   1.1  
07_03_1136 + 24218601-24218734,24218769-24219906                       31   1.4  
12_02_0450 + 19172812-19172920,19173020-19173088,19173168-191732...    30   3.3  
05_01_0120 - 828834-831143                                             30   3.3  
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132...    30   3.3  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   4.3  
05_01_0142 - 940421-940701,941262-941574                               29   5.7  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   7.5  

>06_03_1326 - 29355467-29355817
          Length = 116

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = -2

Query: 821 GXGKXGGXPRGGXXXGGNPXGXXXRSPGGG 732
           G GK GG   GG   GG   G   RS GGG
Sbjct: 10  GGGKGGGGGGGGGKGGGGGSGGGGRSGGGG 39


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 24/79 (30%), Positives = 25/79 (31%)
 Frame = -2

Query: 968 GXXPXXWGXXXLXPGXGXPPXXXXXXXXAPXXPPXXXXXXXXVSRKXXXGXGKXGGXPRG 789
           G  P   G      G G  P         P  PP         +R    G G  GG PR 
Sbjct: 89  GLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGG--ARPPAPGGGGGGGAPRR 146

Query: 788 GXXXGGNPXGXXXRSPGGG 732
               GG   G   R PGGG
Sbjct: 147 -VLGGGGGGGALARPPGGG 164


>12_02_0450 +
           19172812-19172920,19173020-19173088,19173168-19173274,
           19173874-19174365
          Length = 258

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = -2

Query: 821 GXGKXGGXPRGGXXXGGNPXGXXXRSPGGG 732
           G G  GG   GG   GGN  G   R  GGG
Sbjct: 152 GGGGGGGYQGGGGGYGGNNGGYGNRGGGGG 181


>05_01_0120 - 828834-831143
          Length = 769

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -1

Query: 501 PXAXRPGGXGXXGGEGXGXPKNXTPSPP 418
           P A  P G G  GG G G  +   P PP
Sbjct: 33  PDAATPAGAGGGGGAGAGQARRIPPPPP 60


>03_01_0164 -
           1326002-1326409,1326410-1326428,1326523-1326647,
           1327482-1327530,1328834-1328855,1328969-1329071
          Length = 241

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = +1

Query: 619 TPKKGPVFSWXFPXXAPPPPXKNXPKXFYPL--XXXGXXXPPPGDLXXXPXGFPP 777
           TP++ P +   +    P PP +  P   YP      G   PPPG     P  +PP
Sbjct: 176 TPQQ-PAYGQPYGGYPPAPPAQGYPPAAYPPAGYPQGGAYPPPGS-YPPPGSYPP 228


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/52 (34%), Positives = 19/52 (36%)
 Frame = +1

Query: 622 PKKGPVFSWXFPXXAPPPPXKNXPKXFYPLXXXGXXXPPPGDLXXXPXGFPP 777
           P   P F + FP   P P     P  FYP        PPP      P  FPP
Sbjct: 291 PPPPPAFPFPFPQLPPLPHFPPLPS-FYPSPPPPPPPPPPPP-PSFPWPFPP 340


>05_01_0142 - 940421-940701,941262-941574
          Length = 197

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 673 PPXKNXPKXFYPLXXXGXXXPPPGDLXXXPXGFPP 777
           PP +  P   YP    G   PPPG     P  +PP
Sbjct: 30  PPHQGYPPQGYP-PPPGAYPPPPGAYPPPPGAYPP 63


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +1

Query: 667 PPPPXKNXPKXFYPLXXXGXXXPPPGDLXXXPXGFPP 777
           PPPP K  P    P        PPPG     P   PP
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,682,255
Number of Sequences: 37544
Number of extensions: 321738
Number of successful extensions: 1228
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2870111300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)