Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_L08
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    33   0.39 
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100...    31   0.91 
08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,313...    31   1.2  
03_02_0744 + 10880496-10880891                                         29   4.9  
07_03_0741 - 21107566-21107838,21107964-21108102,21108189-211084...    29   6.4  
03_03_0136 - 14757965-14758579                                         29   6.4  
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149...    28   8.5  

>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -1

Query: 610  PFGTDGAKHRSGQTGQAPAYCLGYTHCSEVDHWDGDANLIKLI 482
            P G +   HR G+TG+A A  + YT  SE D W    +L+K++
Sbjct: 926  PTGIEDYVHRIGRTGRAGATGVSYTFFSEQD-WKYAGDLVKVL 967


>06_03_1306 + 29208882-29209547,29209641-29209854,29209947-29210023,
            29210132-29210171,29210254-29210323,29210419-29210488,
            29210747-29210995,29212810-29214700,29215458-29215771
          Length = 1196

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
 Frame = +3

Query: 282  IFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAVQNFKTTCLSDSLKPQGVDTNCP-- 455
            +F    WA +++  +      +E    DN  WSAA    K T    ++  +    NCP  
Sbjct: 921  MFSSPEWASSDLASRSSFRHVYEVVKTDNAFWSAAADILKLTDPLITVLYKLEADNCPIG 980

Query: 456  -AYDIIHCA 479
              YD + CA
Sbjct: 981  ILYDAMDCA 989


>08_01_0356 +
           3131214-3132443,3132584-3132778,3132892-3132972,
           3133324-3133383,3133466-3133560,3133660-3133816,
           3133896-3134021,3134398-3134478,3134557-3134647,
           3134735-3134868,3135068-3135136,3135219-3135308,
           3135405-3135508,3135594-3135762,3136066-3136134
          Length = 916

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/73 (28%), Positives = 37/73 (50%)
 Frame = +3

Query: 210 PKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAV 389
           PKI QP    + +KP++    T    K  G   ++  D+K ++    +F+K   + SA++
Sbjct: 179 PKIEQPGDDSEDDKPLASRLPTNAALKRGGNVSDDSEDEKPLA---ARFSKVTGNASASI 235

Query: 390 QNFKTTCLSDSLK 428
            + K   LS S+K
Sbjct: 236 SSSKDKVLSASIK 248


>03_02_0744 + 10880496-10880891
          Length = 131

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 261 ECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPD 374
           EC       +E   A ++  D+KK SD  E++ KDNP+
Sbjct: 85  ECAAAWDEVEELSAAASHARDRKKDSDPLEEYCKDNPE 122


>07_03_0741 -
           21107566-21107838,21107964-21108102,21108189-21108426,
           21108629-21108836,21108945-21109066,21109146-21109271,
           21109356-21109774,21109844-21110268
          Length = 649

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 489 FIKFASPSQWSTSEQCVYPRQYAGACPV 572
           F+ F SP QW  S+   YP Q + +  V
Sbjct: 127 FMDFLSPDQWQVSQMIWYPEQASASVDV 154


>03_03_0136 - 14757965-14758579
          Length = 204

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -1

Query: 643 VRGRARHAVHXPFGTDGAKHRSGQTGQAPAYCLGYTHCSEVDHWDGD 503
           +RGRA + VH  F  DG+    G  G APA         EV+  D D
Sbjct: 35  LRGRA-YLVHHVFYEDGSASADGGGGVAPASRASIAALREVEEEDDD 80


>06_01_0193 -
           1491710-1491739,1492194-1492319,1492631-1492766,
           1493048-1493112,1493213-1493305,1493433-1493498,
           1493763-1493843,1493977-1494032,1494692-1494780,
           1495340-1495425,1495531-1495647,1496109-1496254,
           1496665-1496725,1496831-1496914,1497028-1497135,
           1497286-1497388,1497802-1497845,1498100-1498584,
           1499417-1499603,1500150-1500362,1501066-1501323
          Length = 877

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 505 LRPNGRLRSSA-CIRGSTRVPVPSALNGASPHQYRMVRVPRALPCP 639
           +RP  R+ ++   +RGS     PS +  A+P   R   VPR LP P
Sbjct: 1   MRPTSRILAAGHLLRGSRSRYDPSPVAAAAPIFRRPPTVPRPLPSP 46


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,623,443
Number of Sequences: 37544
Number of extensions: 407467
Number of successful extensions: 1205
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)