Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_L08
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L77864-1|AAB93631.1|  710|Homo sapiens stat-like protein protein.      31   5.5  
EF103274-1|ABL07489.1|  492|Homo sapiens amyloid beta A4 precurs...    31   5.5  
BX538185-1|CAD98057.1|  502|Homo sapiens hypothetical protein pr...    31   5.5  
BC010854-1|AAH10854.1|  708|Homo sapiens amyloid beta (A4) precu...    31   5.5  
AF394214-1|AAL79526.1|  712|Homo sapiens adaptor protein FE65a2 ...    31   5.5  
AF029234-1|AAC79942.1|  710|Homo sapiens Fe65 protein protein.         31   5.5  
AK124446-1|BAC85853.1|  539|Homo sapiens protein ( Homo sapiens ...    30   9.5  

>L77864-1|AAB93631.1|  710|Homo sapiens stat-like protein protein.
          Length = 710

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = +3

Query: 189 IFPCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 368
           +F C    K I   + E C+K ++E    RC+   +G +    +D  K+ D   Q     
Sbjct: 481 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 534

Query: 369 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 542
           P  +  VQ F+   L +    KP GVD       +I+ AL S +  +S  QW+ S   V 
Sbjct: 535 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 586

Query: 543 P 545
           P
Sbjct: 587 P 587


>EF103274-1|ABL07489.1|  492|Homo sapiens amyloid beta A4 precursor
           protein-binding family B member 1 transcript variant
           protein.
          Length = 492

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = +3

Query: 189 IFPCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 368
           +F C    K I   + E C+K ++E    RC+   +G +    +D  K+ D   Q     
Sbjct: 263 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 316

Query: 369 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 542
           P  +  VQ F+   L +    KP GVD       +I+ AL S +  +S  QW+ S   V 
Sbjct: 317 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 368

Query: 543 P 545
           P
Sbjct: 369 P 369


>BX538185-1|CAD98057.1|  502|Homo sapiens hypothetical protein
           protein.
          Length = 502

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = +3

Query: 189 IFPCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 368
           +F C    K I   + E C+K ++E    RC+   +G +    +D  K+ D   Q     
Sbjct: 273 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 326

Query: 369 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 542
           P  +  VQ F+   L +    KP GVD       +I+ AL S +  +S  QW+ S   V 
Sbjct: 327 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 378

Query: 543 P 545
           P
Sbjct: 379 P 379


>BC010854-1|AAH10854.1|  708|Homo sapiens amyloid beta (A4)
           precursor protein-binding, family B, member 1 (Fe65)
           protein.
          Length = 708

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = +3

Query: 189 IFPCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 368
           +F C    K I   + E C+K ++E    RC+   +G +    +D  K+ D   Q     
Sbjct: 479 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 532

Query: 369 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 542
           P  +  VQ F+   L +    KP GVD       +I+ AL S +  +S  QW+ S   V 
Sbjct: 533 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 584

Query: 543 P 545
           P
Sbjct: 585 P 585


>AF394214-1|AAL79526.1|  712|Homo sapiens adaptor protein FE65a2
           protein.
          Length = 712

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = +3

Query: 189 IFPCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 368
           +F C    K I   + E C+K ++E    RC+   +G +    +D  K+ D   Q     
Sbjct: 481 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 534

Query: 369 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 542
           P  +  VQ F+   L +    KP GVD       +I+ AL S +  +S  QW+ S   V 
Sbjct: 535 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 586

Query: 543 P 545
           P
Sbjct: 587 P 587


>AF029234-1|AAC79942.1|  710|Homo sapiens Fe65 protein protein.
          Length = 710

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = +3

Query: 189 IFPCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 368
           +F C    K I   + E C+K ++E    RC+   +G +    +D  K+ D   Q     
Sbjct: 481 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 534

Query: 369 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 542
           P  +  VQ F+   L +    KP GVD       +I+ AL S +  +S  QW+ S   V 
Sbjct: 535 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 586

Query: 543 P 545
           P
Sbjct: 587 P 587


>AK124446-1|BAC85853.1|  539|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42455 fis, clone BRACE2015314. ).
          Length = 539

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -3

Query: 569 GTGTRVLPRIHALLRSRPLGRRC--EFDKADQSTV 471
           G  +R LPR  AL RSR L  RC  ++++A Q T+
Sbjct: 162 GQSSRALPRSRALPRSRELPARCRRDWERAPQRTL 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,834,795
Number of Sequences: 237096
Number of extensions: 2179170
Number of successful extensions: 5155
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5120
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)