Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_L07
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.70 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.7  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   6.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.5  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   8.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   8.6  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 555 PSLRRGRCPTPSRERERCPSHRPVPFARRSRTRAKKPTRRKSRK 686
           P + R   P+   ERE   S +P P    S++      R++S K
Sbjct: 341 PCILRMSRPSDKEEREAQKSQKPSPVTGASKSHGDLELRQRSSK 384


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 627 PFARRSRTRAKKPTRRKSRKVYEXTSFIT 713
           P+ +R    +  PT+R++ KV +   F+T
Sbjct: 894 PYNQRGTVVSPPPTKRRTMKVVKYHLFLT 922


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 627  PFARRSRTRAKKPTRRKSRKVYEXTSFIT 713
            P+ +R    +  PT+R++ KV +   F+T
Sbjct: 932  PYNQRGTVVSPPPTKRRTMKVVKYHLFLT 960


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 545 GVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKDQSEEAN 667
           G  T T      D +  E  +PI +TG   K I ++ E  N
Sbjct: 141 GKSTTTTVEVKRDIINPEDVIPIRRTGEGSKPIFEREEIKN 181


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 58  SIHK*EYKHTKLYPSD 105
           +I   EY HTK YP D
Sbjct: 54  AIQSGEYDHTKNYPFD 69


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +2

Query: 521 VESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKDQSEEAN 667
           +E R    G  TIT      D +  E  + I +TG   K I ++ E  N
Sbjct: 133 LEIRRDLPGKSTITTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKN 181


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 73  EYKHTKLYPSD 105
           EY HTK YP D
Sbjct: 62  EYDHTKNYPFD 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,736
Number of Sequences: 438
Number of extensions: 4311
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)