Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_L06
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC5D6.01 |rps2202|rps22-2, rps15a-2|40S ribosomal protein S15a... 46 7e-06
SPAC22A12.04c |rps2201|rps22-1, rps15a-1|40S ribosomal protein S... 46 7e-06
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 9e-05
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.017
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.12
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.16
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.6
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.1
>SPAC5D6.01 |rps2202|rps22-2, rps15a-2|40S ribosomal protein
S15a|Schizosaccharomyces pombe|chr 1|||Manual
Length = 130
Score = 46.0 bits (104), Expect = 7e-06
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +3
Query: 72 ILTTSGGIMDHEEARRKHLGGKILGFFF 155
+LTTS GIM H EAR K GGKILGFF+
Sbjct: 103 VLTTSRGIMSHNEARAKDAGGKILGFFY 130
>SPAC22A12.04c |rps2201|rps22-1, rps15a-1|40S ribosomal protein
S15a|Schizosaccharomyces pombe|chr 1|||Manual
Length = 130
Score = 46.0 bits (104), Expect = 7e-06
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +3
Query: 72 ILTTSGGIMDHEEARRKHLGGKILGFFF 155
+LTTS GIM H EAR K GGKILGFF+
Sbjct: 103 VLTTSRGIMSHNEARAKDAGGKILGFFY 130
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 42.3 bits (95), Expect = 9e-05
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -1
Query: 844 PPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
PPP G PPPPP PPPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
PPP G PPPP G PPPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
P PP G PPPPP PPPPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
PPP P P P PPPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.017
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 808 PPPPPXXGXXXXPPPPPPP 752
PPPPP PPPPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 32.3 bits (70), Expect = 0.093
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 820 GXKXPPPPPXXGXXXXPPPPPPP 752
G PPPPP PPPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXG 785
PPPP PPPPP G
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPG 31
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP G PPPP PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP G PPPP PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP G PPPP PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP G PPPP PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP G PPPP PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP G PPPP PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP G PPPP PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP G PPPP PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP G PPPP PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
PPPP PP PPPPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.5 bits (63), Expect = 0.65
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
PPPP + PP PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 29.5 bits (63), Expect = 0.65
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPP 758
PPPP P PP G PPPPP
Sbjct: 339 PPPPPRSNAAGSIPLPP--QGRSAPPPPPP 366
Score = 29.5 bits (63), Expect = 0.65
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
PPPP PPP PP PPP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
PPPP PPP PP PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
PPPP PPPP PP PPP
Sbjct: 1707 PPPPPM-----SVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPP 755
PPPP PP P G PPPP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPA--GPPSAPPPPLP 1736
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -1
Query: 844 PPPXXXGXGXKXPPPPPXXGXXXXPPPP--PPP 752
PPP K PP P P PP PPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -1
Query: 844 PPPXXXGXGXKXPPPPPXXGXXXXPPPPPPP 752
PPP P PPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -1
Query: 847 PPPPXXXGXGXKXPPPPPXXGXXXXPPPPPP 755
PP P PPPPP PP P
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,617,345
Number of Sequences: 5004
Number of extensions: 21407
Number of successful extensions: 261
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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