Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_L05
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine am... 31 0.83
Z71261-7|CAI70415.1| 570|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z71261-6|CAA95803.3| 578|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z92781-4|CAB82208.1| 319|Caenorhabditis elegans Hypothetical pr... 29 5.9
AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical... 29 5.9
AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical ... 29 5.9
AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical ... 29 5.9
AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical ... 29 5.9
AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induc... 29 5.9
U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine
aminopeptidase protein 1 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/82 (26%), Positives = 34/82 (41%)
Frame = +1
Query: 271 TLIFGYAGIRIHLDRIEITRPQLPPETKEFKIKGIKYLGSSLSMHIQATSVTLTVSSVHD 450
+++ GY G IH R+ T P +P K G+ G+S ++ + T D
Sbjct: 268 SVVKGYCGHGIH--RLFHTAPNVPHYAKN-NATGVMKAGNSFTIEPMINAGTYHDDKWPD 324
Query: 451 QWPLVMNDGRYNVTLTPGMTVT 516
W V DGR + + VT
Sbjct: 325 DWTAVTRDGRRSAQFEQTLLVT 346
>Z71261-7|CAI70415.1| 570|Caenorhabditis elegans Hypothetical
protein F21C3.4b protein.
Length = 570
Score = 29.5 bits (63), Expect = 3.4
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = +1
Query: 214 QSPQVGAVNFFTGMGGFLQT---LIFGYAGIRIHLDRIEITRPQLPPETKEFKIKGIKYL 384
+SPQ+G V FF + ++T LIF I + + T P + FK ++
Sbjct: 398 RSPQLGDVAFFDILPRRIETKDRLIFKIPYTHIAVKKKPDT-PDSLLKIDCFK-NSVRCF 455
Query: 385 GSSLSMHIQA--TSVTLTVSSVHDQWPLVMNDGRYNVTLTPGMTVTLPKD 528
G L M ++ + L V HD + + Y + T G+ VT+PK+
Sbjct: 456 GGVLEMKVKIALSKPELVVEQYHDNTEMNSDHHFYYLKATNGVLVTIPKE 505
>Z71261-6|CAA95803.3| 578|Caenorhabditis elegans Hypothetical
protein F21C3.4a protein.
Length = 578
Score = 29.5 bits (63), Expect = 3.4
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = +1
Query: 214 QSPQVGAVNFFTGMGGFLQT---LIFGYAGIRIHLDRIEITRPQLPPETKEFKIKGIKYL 384
+SPQ+G V FF + ++T LIF I + + T P + FK ++
Sbjct: 406 RSPQLGDVAFFDILPRRIETKDRLIFKIPYTHIAVKKKPDT-PDSLLKIDCFK-NSVRCF 463
Query: 385 GSSLSMHIQA--TSVTLTVSSVHDQWPLVMNDGRYNVTLTPGMTVTLPKD 528
G L M ++ + L V HD + + Y + T G+ VT+PK+
Sbjct: 464 GGVLEMKVKIALSKPELVVEQYHDNTEMNSDHHFYYLKATNGVLVTIPKE 513
>Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 219 PPGRRCEFLHWDGRVPADIDLRLRRNQNPFGQDRDYKAATAARNER 356
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 667 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 707
>Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 219 PPGRRCEFLHWDGRVPADIDLRLRRNQNPFGQDRDYKAATAARNER 356
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 773 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 813
>Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 219 PPGRRCEFLHWDGRVPADIDLRLRRNQNPFGQDRDYKAATAARNER 356
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 771 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 811
>Z92781-4|CAB82208.1| 319|Caenorhabditis elegans Hypothetical
protein F09C3.5 protein.
Length = 319
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -1
Query: 318 YPVQMDSDSGVAEDQCLQEPSHPSEEIHSADLGALQLTPDFKRFPDVFLVALAEH 154
+ V D D+ E P E ++AD ++ P++++ P + L L EH
Sbjct: 75 FHVNTDMHLTAGGDRDCSEQISPMETTYNADGRLMRSAPEYRKMPKITLHELIEH 129
>AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 219 PPGRRCEFLHWDGRVPADIDLRLRRNQNPFGQDRDYKAATAARNER 356
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 667 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 707
>AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 219 PPGRRCEFLHWDGRVPADIDLRLRRNQNPFGQDRDYKAATAARNER 356
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 773 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 813
>AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 219 PPGRRCEFLHWDGRVPADIDLRLRRNQNPFGQDRDYKAATAARNER 356
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 771 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 811
>AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical
protein F38A6.3c protein.
Length = 503
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 219 PPGRRCEFLHWDGRVPADIDLRLRRNQNPFGQDRDYKAATAARNER 356
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 451 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 491
>AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induced
factor 1 protein.
Length = 719
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 219 PPGRRCEFLHWDGRVPADIDLRLRRNQNPFGQDRDYKAATAARNER 356
PP +R +H G P+D+D ++ PF QD Y +NE+
Sbjct: 667 PPAKR---MHQSG--PSDLDFMYTQHYQPFQQDETYWQGQQQQNEQ 707
>U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical
protein B0244.6 protein.
Length = 982
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 178 YVREPFKVWSELQSPQVGAVNFFTGMGGFLQTLI 279
YV P K S++ SP VG +NF FL T+I
Sbjct: 792 YVPGPIKCDSQVCSPIVGLINFIIVSFAFLITII 825
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,374,429
Number of Sequences: 27780
Number of extensions: 386586
Number of successful extensions: 1060
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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