Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_L05
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   2.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   4.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.5  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 408  PGDQRHADGVVGARPVAVSHERREIQRDAHSWYDSDT 518
            PG Q++  GV   RP    H R   + +  +   SDT
Sbjct: 930  PGSQQNVAGVFNLRPATTYHLRIVAENEIGASDPSDT 966


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 387 IESVDAYPGDQRHADGVVG 443
           I S D  PG Q H  GV G
Sbjct: 528 IRSTDVIPGTQEHVCGVKG 546


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 276 QCLQEPSHPSEEIHSADLGALQLTPDFKR 190
           QC+    +    +HS   GA+QL    KR
Sbjct: 50  QCISSRRNGRHNVHSLAFGAIQLRQLLKR 78


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 196 KVWSELQSPQVGAVNFFTGMGG 261
           K+  +++ P   AVN  TGMGG
Sbjct: 167 KLLKQIEIPHNIAVNASTGMGG 188


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 418 SVTLTVSSVHDQWPLVMNDGRYNVTLTPGMTVTLPKDGI 534
           SVT  VS  HD   +    GR        +T+TLP  G+
Sbjct: 344 SVTNWVSGNHDNHRVASRFGRQRGDEIVMLTLTLPGIGV 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,170
Number of Sequences: 438
Number of extensions: 4883
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)