Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_L04
         (869 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p...    30   2.5  
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.        30   2.5  
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p...    28   7.5  
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p...    28   7.5  
AC024817-41|AAY86306.1|  152|Caenorhabditis elegans Hypothetical...    28   10.0 

>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
           protein T01D3.3b protein.
          Length = 1011

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
 Frame = +3

Query: 519 EQCVYPRQYA--GAC-PVCPERCFAPSVP--NGSCNA-CLALP 629
           ++CV P ++A   +C  +CPE C  PSVP  +G+C+A C   P
Sbjct: 778 QRCVCPDKHAVWSSCGTLCPEYCGQPSVPVCSGTCSAGCHCAP 820


>Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical
           protein T01D3.3a protein.
          Length = 802

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
 Frame = +3

Query: 519 EQCVYPRQYA--GAC-PVCPERCFAPSVP--NGSCNA-CLALP 629
           ++CV P ++A   +C  +CPE C  PSVP  +G+C+A C   P
Sbjct: 569 QRCVCPDKHAVWSSCGTLCPEYCGQPSVPVCSGTCSAGCHCAP 611


>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical protein
            T04A8.14 protein.
          Length = 1521

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 3/126 (2%)
 Frame = +3

Query: 153  VYCGELPNTIFPCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSD 332
            V C   P     C G  KI   +VSEK +  +   D +R   +   WA+   +D  +V D
Sbjct: 988  VGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDD 1047

Query: 333  YFEQFA--KDNPDWSAAVQNFKTTCXSDSLKPQGV-DTNCPAYDIIHCALISFIKFASPS 503
              +  A  ++  +    +++      +D L  QG  +     YDI       +     P 
Sbjct: 1048 SADPTAALQEIMESPDRLRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKDLRQPF 1107

Query: 504  QWSTSE 521
            Q  T E
Sbjct: 1108 QEPTGE 1113


>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
            protein T04A8.14 protein.
          Length = 1521

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 3/126 (2%)
 Frame = +3

Query: 153  VYCGELPNTIFPCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSD 332
            V C   P     C G  KI   +VSEK +  +   D +R   +   WA+   +D  +V D
Sbjct: 988  VGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDD 1047

Query: 333  YFEQFA--KDNPDWSAAVQNFKTTCXSDSLKPQGV-DTNCPAYDIIHCALISFIKFASPS 503
              +  A  ++  +    +++      +D L  QG  +     YDI       +     P 
Sbjct: 1048 SADPTAALQEIMESPDRLRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKDLRQPF 1107

Query: 504  QWSTSE 521
            Q  T E
Sbjct: 1108 QEPTGE 1113


>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
          Length = 1521

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 3/126 (2%)
 Frame = +3

Query: 153  VYCGELPNTIFPCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSD 332
            V C   P     C G  KI   +VSEK +  +   D +R   +   WA+   +D  +V D
Sbjct: 988  VGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDD 1047

Query: 333  YFEQFA--KDNPDWSAAVQNFKTTCXSDSLKPQGV-DTNCPAYDIIHCALISFIKFASPS 503
              +  A  ++  +    +++      +D L  QG  +     YDI       +     P 
Sbjct: 1048 SADPTAALQEIMESPDRLRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKDLRQPF 1107

Query: 504  QWSTSE 521
            Q  T E
Sbjct: 1108 QEPTGE 1113


>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 240 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 368
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 240 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 368
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 240 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 368
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 240 KPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDW 368
           + I++ D  R     + W K N  D+     YF+ F + NPDW
Sbjct: 784 RTIADYDNNRLAVVGTQW-KENFFDQ-----YFDNFTRQNPDW 820


>AC024817-41|AAY86306.1|  152|Caenorhabditis elegans Hypothetical
           protein Y54G2A.50 protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 216 PEVSEKCNKPISECDKT 266
           P +SE  +KPISEC KT
Sbjct: 42  PSISETGHKPISECGKT 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,552,234
Number of Sequences: 27780
Number of extensions: 368119
Number of successful extensions: 1161
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)