Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_L03
(884 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 364 2e-99
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 359 7e-98
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 358 9e-98
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 315 1e-84
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 236 6e-61
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 230 4e-59
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 206 8e-52
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 196 6e-49
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 177 4e-43
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 169 1e-40
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 149 7e-35
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 139 8e-32
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 137 3e-31
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 134 2e-30
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 133 5e-30
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 133 5e-30
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 132 1e-29
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 132 1e-29
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 130 5e-29
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 129 8e-29
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 129 1e-28
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 126 7e-28
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 125 1e-27
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 125 1e-27
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 124 4e-27
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 123 7e-27
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 122 1e-26
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 122 2e-26
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 121 2e-26
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 121 3e-26
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 121 3e-26
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 121 3e-26
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 120 7e-26
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 119 9e-26
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 119 9e-26
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 119 1e-25
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 119 1e-25
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 119 1e-25
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 118 2e-25
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 118 2e-25
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 118 3e-25
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 117 3e-25
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 117 3e-25
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 117 3e-25
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 117 5e-25
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 117 5e-25
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 117 5e-25
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 117 5e-25
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 116 6e-25
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 116 8e-25
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 116 8e-25
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 116 8e-25
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 116 8e-25
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 116 8e-25
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 116 1e-24
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 116 1e-24
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 116 1e-24
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 116 1e-24
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 115 1e-24
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 115 1e-24
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 115 1e-24
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 115 2e-24
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 115 2e-24
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 115 2e-24
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 114 2e-24
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 114 2e-24
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 114 2e-24
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 114 2e-24
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 114 2e-24
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 114 3e-24
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 113 4e-24
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 113 6e-24
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 113 6e-24
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 113 6e-24
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 113 6e-24
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 113 6e-24
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 113 7e-24
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 113 7e-24
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 112 1e-23
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 112 1e-23
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 111 2e-23
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 111 2e-23
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 111 2e-23
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 111 2e-23
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 111 2e-23
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 111 2e-23
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 111 2e-23
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 111 3e-23
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 111 3e-23
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 110 4e-23
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 110 5e-23
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 110 5e-23
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 109 7e-23
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 109 7e-23
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 109 7e-23
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 109 7e-23
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 109 9e-23
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 109 9e-23
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 109 9e-23
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 109 1e-22
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 109 1e-22
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 109 1e-22
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 109 1e-22
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 109 1e-22
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 108 2e-22
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 108 2e-22
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 108 2e-22
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 108 2e-22
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 107 3e-22
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 107 3e-22
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 107 3e-22
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 107 4e-22
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 107 4e-22
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 107 5e-22
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 107 5e-22
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 107 5e-22
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 106 6e-22
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 106 6e-22
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 106 6e-22
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 106 9e-22
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 105 1e-21
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 105 1e-21
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 105 1e-21
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 105 1e-21
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 105 1e-21
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 105 1e-21
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 105 1e-21
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 105 1e-21
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 105 2e-21
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 105 2e-21
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 104 3e-21
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 104 3e-21
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 104 3e-21
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 104 3e-21
UniRef50_A5B712 Cluster: Putative uncharacterized protein; n=1; ... 104 3e-21
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 104 3e-21
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 103 5e-21
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 103 5e-21
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 103 5e-21
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 103 5e-21
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 103 5e-21
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 103 6e-21
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 103 6e-21
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 103 6e-21
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 103 6e-21
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 103 8e-21
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 103 8e-21
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 103 8e-21
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 102 1e-20
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 102 1e-20
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 102 1e-20
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 102 1e-20
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 102 1e-20
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 102 1e-20
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 102 1e-20
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 102 1e-20
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 101 2e-20
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 101 2e-20
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 101 2e-20
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 101 2e-20
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 101 2e-20
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 101 2e-20
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 101 2e-20
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 101 2e-20
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 101 2e-20
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 101 2e-20
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 101 2e-20
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 101 3e-20
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 101 3e-20
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 101 3e-20
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 101 3e-20
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 100 4e-20
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 100 4e-20
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 100 4e-20
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 100 4e-20
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 100 4e-20
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 100 4e-20
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 100 4e-20
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 100 6e-20
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 100 6e-20
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 100 6e-20
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 100 6e-20
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 99 7e-20
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 99 7e-20
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 99 7e-20
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 99 7e-20
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 100 1e-19
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 100 1e-19
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 100 1e-19
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 100 1e-19
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 100 1e-19
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 99 1e-19
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 99 1e-19
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 99 1e-19
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 99 1e-19
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 99 1e-19
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 99 1e-19
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 99 1e-19
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 99 1e-19
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 99 2e-19
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 99 2e-19
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 99 2e-19
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 99 2e-19
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 98 2e-19
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 98 2e-19
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 98 2e-19
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 98 2e-19
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 98 2e-19
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 98 2e-19
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 98 2e-19
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 98 2e-19
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 98 2e-19
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 98 3e-19
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 98 3e-19
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 98 3e-19
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 98 3e-19
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 98 3e-19
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 98 3e-19
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 98 3e-19
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 98 3e-19
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 97 4e-19
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 97 4e-19
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 97 4e-19
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 97 4e-19
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 97 4e-19
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 97 4e-19
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 97 4e-19
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 97 4e-19
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 97 4e-19
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 97 5e-19
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 97 5e-19
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 97 5e-19
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 97 5e-19
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 97 5e-19
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 97 7e-19
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 97 7e-19
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 97 7e-19
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 97 7e-19
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 97 7e-19
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 97 7e-19
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 96 9e-19
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 96 9e-19
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 96 1e-18
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 96 1e-18
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 96 1e-18
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 95 2e-18
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 95 2e-18
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 95 2e-18
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 95 2e-18
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 95 2e-18
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 95 3e-18
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 95 3e-18
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 95 3e-18
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 95 3e-18
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 95 3e-18
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 95 3e-18
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 94 4e-18
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 94 4e-18
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 94 4e-18
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 94 4e-18
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 94 4e-18
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 94 4e-18
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 94 4e-18
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 94 5e-18
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 94 5e-18
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 94 5e-18
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 94 5e-18
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 94 5e-18
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 93 6e-18
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 93 6e-18
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 93 6e-18
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 93 6e-18
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 93 6e-18
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 93 6e-18
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 6e-18
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 93 9e-18
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 93 9e-18
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 93 9e-18
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 93 9e-18
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 93 9e-18
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 93 9e-18
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 93 9e-18
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 93 1e-17
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 93 1e-17
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 93 1e-17
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 93 1e-17
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 93 1e-17
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 92 1e-17
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 92 1e-17
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 92 1e-17
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 92 1e-17
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 92 1e-17
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 92 1e-17
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 92 2e-17
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 92 2e-17
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 92 2e-17
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 92 2e-17
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 91 3e-17
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 91 3e-17
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 91 3e-17
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 91 3e-17
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 91 3e-17
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 91 3e-17
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 91 3e-17
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 91 3e-17
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 91 3e-17
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 91 5e-17
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 91 5e-17
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 91 5e-17
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 91 5e-17
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 90 6e-17
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 90 6e-17
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 90 6e-17
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 90 6e-17
UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n... 90 6e-17
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 90 6e-17
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 90 6e-17
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 90 6e-17
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 90 8e-17
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 90 8e-17
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 90 8e-17
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 90 8e-17
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 90 8e-17
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 90 8e-17
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 89 1e-16
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 89 1e-16
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 89 1e-16
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 89 1e-16
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 89 1e-16
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 89 1e-16
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 89 2e-16
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 89 2e-16
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 89 2e-16
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 89 2e-16
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 88 2e-16
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 88 2e-16
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 88 2e-16
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 88 2e-16
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 88 2e-16
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 88 2e-16
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 88 2e-16
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 88 2e-16
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 88 2e-16
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 88 3e-16
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 88 3e-16
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 88 3e-16
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 88 3e-16
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 88 3e-16
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 87 4e-16
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 87 4e-16
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 87 4e-16
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 87 4e-16
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 87 4e-16
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 87 4e-16
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 87 6e-16
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 87 6e-16
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 87 6e-16
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 87 6e-16
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 87 6e-16
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 87 6e-16
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 87 6e-16
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 87 6e-16
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 87 7e-16
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 87 7e-16
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 87 7e-16
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 87 7e-16
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 87 7e-16
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 86 1e-15
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 86 1e-15
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 86 1e-15
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 86 1e-15
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 86 1e-15
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 86 1e-15
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 86 1e-15
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 86 1e-15
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 86 1e-15
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 85 2e-15
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 85 2e-15
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 85 2e-15
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 85 2e-15
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 85 2e-15
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 85 2e-15
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 85 2e-15
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 85 2e-15
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 85 2e-15
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 85 2e-15
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 85 2e-15
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 85 2e-15
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 85 2e-15
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 85 2e-15
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 85 2e-15
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 85 3e-15
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 85 3e-15
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 85 3e-15
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 85 3e-15
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 85 3e-15
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 85 3e-15
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 84 4e-15
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 84 4e-15
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 84 4e-15
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 84 4e-15
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 84 4e-15
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 84 5e-15
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 84 5e-15
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 84 5e-15
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 84 5e-15
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 83 7e-15
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 83 7e-15
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 83 7e-15
UniRef50_Q0UG00 Cluster: ATP-dependent RNA helicase MSS116, mito... 83 7e-15
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 83 9e-15
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 83 9e-15
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 83 9e-15
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 83 9e-15
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 83 1e-14
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 83 1e-14
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 83 1e-14
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 83 1e-14
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 82 2e-14
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 82 2e-14
UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n... 82 2e-14
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 82 2e-14
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 82 2e-14
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 82 2e-14
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 82 2e-14
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 82 2e-14
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 82 2e-14
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 82 2e-14
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 82 2e-14
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 82 2e-14
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 82 2e-14
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 82 2e-14
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 82 2e-14
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 82 2e-14
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 82 2e-14
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 82 2e-14
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 81 3e-14
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 81 3e-14
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 81 3e-14
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 81 3e-14
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 81 3e-14
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 81 3e-14
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 81 4e-14
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 81 4e-14
UniRef50_A4V6L4 Cluster: DEAD/H box protein; n=1; Dugesia japoni... 81 4e-14
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 81 4e-14
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 81 4e-14
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 81 4e-14
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 81 5e-14
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 81 5e-14
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 81 5e-14
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 81 5e-14
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 81 5e-14
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 81 5e-14
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 81 5e-14
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 81 5e-14
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 80 6e-14
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 80 6e-14
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 80 6e-14
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 80 6e-14
UniRef50_A7AU89 Cluster: DEAD/DEAH box helicase family protein; ... 80 6e-14
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 80 6e-14
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 80 9e-14
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 80 9e-14
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 80 9e-14
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 80 9e-14
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 80 9e-14
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 80 9e-14
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 80 9e-14
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 79 1e-13
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 79 1e-13
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 79 1e-13
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 79 1e-13
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 79 1e-13
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 79 1e-13
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 79 1e-13
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 79 1e-13
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 79 1e-13
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 79 1e-13
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 79 1e-13
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 79 1e-13
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 79 1e-13
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 79 1e-13
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 79 2e-13
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 79 2e-13
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 79 2e-13
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 79 2e-13
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 79 2e-13
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 79 2e-13
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 79 2e-13
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 78 3e-13
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 78 3e-13
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 364 bits (895), Expect = 2e-99
Identities = 175/212 (82%), Positives = 187/212 (88%), Gaps = 1/212 (0%)
Frame = +1
Query: 202 APKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQA 381
APKK+VKG+YVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQA
Sbjct: 26 APKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQA 85
Query: 382 KSGMGKTAVFVLATLQQLEPSESHV-YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVF 558
KSGMGKTAVFVLATLQQLEPS+++ +VLVMCHTRELAFQISKEYERFSKYM V+V+VF
Sbjct: 86 KSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVF 145
Query: 559 FGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMR 738
FGGM IQKDEE LK+ PHIVVGTPGRILA F+LDECDKMLE LDMR
Sbjct: 146 FGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMR 205
Query: 739 RDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
RDVQEIFR+ PHGKQVMMFSA LSK+IRPVCK
Sbjct: 206 RDVQEIFRSTPHGKQVMMFSATLSKDIRPVCK 237
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 359 bits (882), Expect = 7e-98
Identities = 169/215 (78%), Positives = 182/215 (84%)
Frame = +1
Query: 190 STEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDI 369
ST PKK++KGSYVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMD+
Sbjct: 25 STPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDV 84
Query: 370 LCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV 549
LCQAKSGMGKTAVFVLATLQQ+EP V VLVMCHTRELAFQISKEYERFSKYM V+V
Sbjct: 85 LCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKV 144
Query: 550 SVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESL 729
SVFFGG+ I+KDEEVLK CPH+VVGTPGRILA F+LDECDKMLE L
Sbjct: 145 SVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQL 204
Query: 730 DMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
DMRRDVQEIFR PH KQ MMFSA LSK+IRPVC+
Sbjct: 205 DMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCR 239
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 358 bits (881), Expect = 9e-98
Identities = 172/213 (80%), Positives = 181/213 (84%)
Frame = +1
Query: 196 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 375
E KK+VKGSYVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMD+LC
Sbjct: 28 EAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 87
Query: 376 QAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 555
QAKSGMGKTAVFVLATLQQLEP V VLVMCHTRELAFQISKEYERFSKYM V+V+V
Sbjct: 88 QAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAV 147
Query: 556 FFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDM 735
FFGG+ I+KDEEVLK CPHIVVGTPGRILA FILDECDKMLE LDM
Sbjct: 148 FFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDM 207
Query: 736 RRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
RRDVQEIFR PH KQVMMFSA LSKEIRPVC+
Sbjct: 208 RRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 315 bits (773), Expect = 1e-84
Identities = 148/206 (71%), Positives = 167/206 (81%)
Frame = +1
Query: 217 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 396
VK YV IHSSGFRDFLLKPE+LRAIVD GFEHPSEVQHECIPQA+LGMD++CQAKSGMG
Sbjct: 36 VKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
Query: 397 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 576
KTAVFVL+TLQQ+EPS V LV+CHTRELA+QI E+ RFS Y+ +VSVF+GG+ I
Sbjct: 96 KTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
Query: 577 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 756
+ +++LK CPHIVVGTPGR+LA FILDECDKMLESLDMRRDVQEI
Sbjct: 156 KIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
Query: 757 FRNPPHGKQVMMFSAXLSKEIRPVCK 834
F+ PH KQVMMFSA LSKEIRPVCK
Sbjct: 216 FKMTPHDKQVMMFSATLSKEIRPVCK 241
>UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Homo
sapiens|Rep: HLA-B associated transcript 1 - Homo
sapiens (Human)
Length = 197
Score = 236 bits (577), Expect = 6e-61
Identities = 123/170 (72%), Positives = 132/170 (77%), Gaps = 28/170 (16%)
Frame = +1
Query: 196 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 375
E KK+VKGSYVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMD+LC
Sbjct: 28 EAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 87
Query: 376 QAKSGMGKTAVFVLATLQQLEP-------SESH---------------------VYVLVM 471
QAKSGMGKTAVFVLATLQQLEP +SH V VLVM
Sbjct: 88 QAKSGMGKTAVFVLATLQQLEPVTGQVCFCDSHFPRGDNEELHLPYVSVYFLPKVSVLVM 147
Query: 472 CHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIV 621
CHTRELAFQISKEYERFSKYM V+V+VFFGG+ I+KDEEVLK CPHIV
Sbjct: 148 CHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIV 197
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 230 bits (562), Expect = 4e-59
Identities = 119/227 (52%), Positives = 150/227 (66%), Gaps = 21/227 (9%)
Frame = +1
Query: 217 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 396
++GSY ++H+ GF+DF LKPE+LRAI + GFEHPSEVQ E IP A+ G DILCQAKSGMG
Sbjct: 45 MRGSYATVHTGGFKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMG 104
Query: 397 KTAVFVLATLQQLEPSESH--------------------VYVLVMCHTRELAFQISKEYE 516
KTAVFVL+ LQQL+ +E+ V L + HTRELA+QI E++
Sbjct: 105 KTAVFVLSILQQLDTNENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFD 164
Query: 517 RFSKYMSGVRVSVFFGGMPIQKDEEVLKTA-CPHIVVGTPGRILAXXXXXXXXXXXXXXF 693
RFSKY+ VR V +GG+ + K ++ K PHI++GTPGRILA F
Sbjct: 165 RFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHF 224
Query: 694 ILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
+LDECDK LE LDMR DVQ+IF + P KQVM FSA ++KE+R VCK
Sbjct: 225 VLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVCK 271
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 206 bits (502), Expect = 8e-52
Identities = 105/208 (50%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Frame = +1
Query: 223 GSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 402
G++ ++ GF+DF LK E+ AI + GFEHPSEVQH+ +P+A+LG DIL QAKSGMGKT
Sbjct: 28 GTHSAVALGGFQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKT 87
Query: 403 AVFVLATLQQLE--PSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 570
AVFV A L+Q+E P Y +V+ H RELA+QI +E++RFSKY+ VFFGG+
Sbjct: 88 AVFVFALLEQVEKVPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLPYATTGVFFGGI 147
Query: 571 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQ 750
P ++ + LK P I+VGTPGR+ A F++DE D+ LE + MRRDVQ
Sbjct: 148 PEDENVKQLKKEVPAIIVGTPGRMKALIQNKAFDTTHVKWFVVDEFDRCLEDVKMRRDVQ 207
Query: 751 EIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
EIF P KQVMMFSA ++ E+R V K
Sbjct: 208 EIFMKLPKEKQVMMFSATMTDELRDVAK 235
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 196 bits (478), Expect = 6e-49
Identities = 103/218 (47%), Positives = 132/218 (60%), Gaps = 3/218 (1%)
Frame = +1
Query: 190 STEVAP-KKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMD 366
+ AP +K +G HSS F DF LK ++LR++ + GFE PSEVQH+CIP A+ G D
Sbjct: 19 ANSTAPVQKHAQGFNTGGHSS-FNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKD 77
Query: 367 ILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVR 546
+LCQAK+G GKTAVFVL+ L QL LV+CHTRELAFQI E++R K+ + +
Sbjct: 78 VLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKF-TNFK 136
Query: 547 VSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILA--XXXXXXXXXXXXXXFILDECDKML 720
V +GG+ D LKT PHI+V TPGR L+ FI+DECD++L
Sbjct: 137 VKAVYGGVEESVDIHTLKTKKPHILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVL 196
Query: 721 ESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
S MR DVQ IF P KQVMMFS +S E + C+
Sbjct: 197 SSNKMRSDVQNIFYELPRKKQVMMFSGTMSDESKKTCR 234
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 177 bits (430), Expect = 4e-43
Identities = 93/210 (44%), Positives = 129/210 (61%), Gaps = 5/210 (2%)
Frame = +1
Query: 220 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 399
K +YV S F++ LK EI+++I DCGFEHPSEVQ + IP+A+L DILCQAKSGMGK
Sbjct: 26 KDTYVGTVS--FQEMGLKKEIMQSITDCGFEHPSEVQSQVIPKALLRQDILCQAKSGMGK 83
Query: 400 TAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYM-----SGVRVSVFFG 564
TAVFVL+ L Q HV +V+CHTRELA Q+ E++R K + ++ + + G
Sbjct: 84 TAVFVLSILNQGLFLGDHVSAIVICHTRELARQVQNEFDRMKKRLVESIGKDIQTASYIG 143
Query: 565 GMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRD 744
G P D + LK P I+VGTPGR+ + F++DECDK+L S D
Sbjct: 144 GNPESNDVDDLKNRKPTIIVGTPGRLASLNNSGALDLSKLDTFVIDECDKILSS-KSELD 202
Query: 745 VQEIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
+ +F + KQVMMFSA +S++ + +C+
Sbjct: 203 IMSLFMSSSKNKQVMMFSATISEQNKALCR 232
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 169 bits (410), Expect = 1e-40
Identities = 88/198 (44%), Positives = 119/198 (60%), Gaps = 2/198 (1%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
S F++F LK E+LRA+ + GFEHP+ VQ E + A+LG ++CQAK+G GKTAVFVL L
Sbjct: 73 SQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTVL 132
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFF-GGMPIQKDEEVLKT 603
+ + V LV+ HTRELA Q E+ R K+M V+V F+ GG P+ + + ++T
Sbjct: 133 NTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEPVSVNIQTIET 192
Query: 604 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
P IVVGTPGR+ FILDE D M+E L+MR+D+Q+IF P K
Sbjct: 193 VKPQIVVGTPGRLKDLICERKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFLKSPQEK 252
Query: 781 QVMMFSAXLSKEIRPVCK 834
Q M FSA ++ R K
Sbjct: 253 QFMAFSATFTESSRTSLK 270
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 149 bits (362), Expect = 7e-35
Identities = 73/194 (37%), Positives = 115/194 (59%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F +F + E+L+AI D GFE P+ +Q IPQ + G D+ QA++G GKTA F + +++
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIER 66
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L+P +V LV+ TRELA Q ++E+ R KY G+ V +GG PI++ LK
Sbjct: 67 LDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALK-GTV 125
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+V+GTPGR++ FILDE D+ML+ + R D+++IFR+ P +Q ++
Sbjct: 126 QVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLD-MGFREDIEDIFRDTPKDRQTIL 184
Query: 793 FSAXLSKEIRPVCK 834
FSA + + I + +
Sbjct: 185 FSATMPQPILDITR 198
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 139 bits (337), Expect = 8e-32
Identities = 77/194 (39%), Positives = 101/194 (52%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L IL+A+ D GFE PS +Q CIP + G D+L A++G GKTA F L L Q
Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQ 66
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++PSE H +LVM TRELA Q++ E F KY G R+ +GG LK
Sbjct: 67 IDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA- 125
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+VVGTPGRIL +LDE D+ML + DV+ + P Q +
Sbjct: 126 QVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLR-MGFIDDVETVMAELPENHQTAL 184
Query: 793 FSAXLSKEIRPVCK 834
FSA + + IR + K
Sbjct: 185 FSATMPEPIRRITK 198
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 137 bits (332), Expect = 3e-31
Identities = 77/194 (39%), Positives = 103/194 (53%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D LK IL A+ D G+E PS +Q ECIP + G D+L A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L+P +LV+ TRELA Q+++ FSK+M GV V +GG L+ P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQG-P 126
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
IVVGTPGR+L +LDE D+ML + DV+ I P G Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 793 FSAXLSKEIRPVCK 834
FSA + + IR + +
Sbjct: 186 FSATMPEAIRRITR 199
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 134 bits (325), Expect = 2e-30
Identities = 65/189 (34%), Positives = 110/189 (58%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+D + PEI +A+ D GFE S +Q IPQ + D+ QA++G GKTA F + L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ ++++ +++C TRELA Q+++E + S Y+ + V +GG PI + + L+
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGV- 124
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
I++GTPGR++ ILDE D+ML+ + R D++ I + P+ +Q ++
Sbjct: 125 QIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLD-MGFREDIEYILEDIPYERQFLL 183
Query: 793 FSAXLSKEI 819
FSA L +EI
Sbjct: 184 FSATLPQEI 192
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 133 bits (322), Expect = 5e-30
Identities = 77/202 (38%), Positives = 112/202 (55%), Gaps = 3/202 (1%)
Frame = +1
Query: 205 PKKEVK---GSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 375
PKK+ + ++ + F DF LK E+L I + GFE PS +Q E IP A+ G DIL
Sbjct: 29 PKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILA 88
Query: 376 QAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 555
+AK+G GKTA FV+ TL++++P + + L+M TRELA Q S+ K+ G+ V
Sbjct: 89 RAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKH-CGISCMV 147
Query: 556 FFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDM 735
GG + +D+ + HI+VGTPGR+L FI+DE DKML S D
Sbjct: 148 TTGGTNL-RDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDF 205
Query: 736 RRDVQEIFRNPPHGKQVMMFSA 801
+ +++I P Q ++FSA
Sbjct: 206 KTIIEQILSFLPPTHQSLLFSA 227
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 133 bits (322), Expect = 5e-30
Identities = 76/204 (37%), Positives = 114/204 (55%), Gaps = 4/204 (1%)
Frame = +1
Query: 202 APKKEVKGSYVSI---HSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDIL 372
AP K+++ + S F DF L+ E+L I GFE PS +Q + IP A+ G DIL
Sbjct: 18 APPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDIL 77
Query: 373 CQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS 552
+AK+G GKTA F++ TL ++ S SH+ L++ TRELA Q S+ + ++ ++V
Sbjct: 78 ARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVM 137
Query: 553 VFFGGMPIQKDEEVLKTACP-HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESL 729
+ GG ++ D +L+ P HI+VGTPGRIL F++DE DK+L S
Sbjct: 138 ITTGGTTLRDD--ILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLL-SE 194
Query: 730 DMRRDVQEIFRNPPHGKQVMMFSA 801
D +++ P +QVM+FSA
Sbjct: 195 DFMPVIEQTLALCPQERQVMLFSA 218
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 132 bits (319), Expect = 1e-29
Identities = 66/194 (34%), Positives = 107/194 (55%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L EI AI++ GFE S +Q E IP + G DI+ A++G GKTA F + T++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
LE H+ L++C TREL Q+S+++ + KY V +GG I++ L+ P
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKN-P 129
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
IV+ TPGR++ +LDE D+ML+ + R D++ I ++ P +Q +M
Sbjct: 130 QIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLD-MGFREDMEFILKDTPADRQTIM 188
Query: 793 FSAXLSKEIRPVCK 834
FSA ++ ++ + K
Sbjct: 189 FSATMTDDVLTLMK 202
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 132 bits (319), Expect = 1e-29
Identities = 69/185 (37%), Positives = 104/185 (56%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+D L+ E+L+AI + GF PS +Q IP+ + G D++ QA++G GKTA F L LQ+
Sbjct: 7 FKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQR 66
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ ++ V LV+C TRELA Q++ +K++ GVR+ +GG PI+ L+
Sbjct: 67 IDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGA- 125
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+VVGTPGRIL +LDE D+ML+ + R D++ I P Q
Sbjct: 126 QVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLD-MGFREDIERILSEMPEWVQSAF 184
Query: 793 FSAXL 807
FSA +
Sbjct: 185 FSATM 189
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 130 bits (314), Expect = 5e-29
Identities = 70/194 (36%), Positives = 108/194 (55%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+D L PE++ AI G+ + +Q + IP + G D+ QA++G GKTA F + ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ S + L++C TRELA Q+ E ++ SK+ G+RV +GG I++ LK A
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLK-AGA 121
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HIVVGTPGRI+ ILDE D+ML ++ R D++ I P +Q ++
Sbjct: 122 HIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEML-NMGFREDIELILTRLPEERQTVL 180
Query: 793 FSAXLSKEIRPVCK 834
FSA L+ I + K
Sbjct: 181 FSATLAPPILALAK 194
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 129 bits (312), Expect = 8e-29
Identities = 63/194 (32%), Positives = 106/194 (54%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L P I++AI D G+E P+ +Q E IP + G D+ QA +G GKTA F + ++
Sbjct: 6 FSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIEL 65
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+P+ +V +V+C +RELA Q+ E + + + G+ + +GG PI++ + L
Sbjct: 66 CQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSRGV- 124
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
I++GTPGR++ +LDE D+ML+ + R D++EI + P +Q ++
Sbjct: 125 QIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLD-MGFREDIEEILSHIPKERQTVI 183
Query: 793 FSAXLSKEIRPVCK 834
SA EI + +
Sbjct: 184 LSATFPPEILDISR 197
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 129 bits (311), Expect = 1e-28
Identities = 67/190 (35%), Positives = 110/190 (57%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
FRD L ++L+A+ D GFE PS +Q + IP + G D++ QA++G GKTA F + +++
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L P + V LV+ TRELA Q+++E + ++ + V+ +GG I++ L+
Sbjct: 68 LVPGQRAVQALVLTPTRELAIQVAEEITKIGRH-ARVKTIAIYGGQSIERQIRSLRFGV- 125
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+V+GTPGRIL +LDE D+ML+ + D+++I +N P +Q ++
Sbjct: 126 DVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLD-MGFIEDIEKILQNTPAERQTLL 184
Query: 793 FSAXLSKEIR 822
FSA + EIR
Sbjct: 185 FSATMPPEIR 194
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 126 bits (304), Expect = 7e-28
Identities = 67/194 (34%), Positives = 106/194 (54%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L +++A+ G+E PS +Q IP + G D+L QA++G GKTA F L L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ VLV+ TRELA Q+++ ++R++ +SG RV +GG + LK
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGV- 135
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
H++VGTPGR++ +LDE D+ML + DV+E+ R P +QV +
Sbjct: 136 HVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLR-MGFIEDVEEVLRKLPASRQVAL 194
Query: 793 FSAXLSKEIRPVCK 834
FSA + +IR + +
Sbjct: 195 FSATMPPQIRRIAQ 208
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 125 bits (302), Expect = 1e-27
Identities = 67/194 (34%), Positives = 109/194 (56%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L P I+RA+ + GFE + +Q + IP A+ G D++ QA++G GKTA F + ++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ P+ V LV+ TRELA Q+++E R K + G+R +GG + + L+ P
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGK-VRGIRSVAIYGGQDFRSQVKALE-ELP 121
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HIVVGTPGR+L +LDE DKML+ + + ++I + P +Q ++
Sbjct: 122 HIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLD-MGFIDEAEKILKKLPERRQTLL 180
Query: 793 FSAXLSKEIRPVCK 834
FSA LS ++ + +
Sbjct: 181 FSATLSPPVQMLAR 194
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 125 bits (302), Expect = 1e-27
Identities = 73/194 (37%), Positives = 98/194 (50%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D LK +LR I GFE PS +Q I + G D++ QA+SG GKTA F ++ LQQ
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
LE LV+ TRELA QI K YM G GG ++ + + L+ P
Sbjct: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKLQAEAP 153
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HIVVGTPGR+ F+LDE D+ML S + + EIF+ QV++
Sbjct: 154 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVL 212
Query: 793 FSAXLSKEIRPVCK 834
SA + ++ V K
Sbjct: 213 LSATMPTDVLEVTK 226
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 124 bits (298), Expect = 4e-27
Identities = 65/197 (32%), Positives = 105/197 (53%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
+ GF + P +L AI G+E PS +Q + IP + G D++ QA++G GKTA F L
Sbjct: 22 TGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPM 81
Query: 424 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L +++P+ +L++ TRELA Q++ +E ++ + GV V +GG P+ + L+
Sbjct: 82 LSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQ 141
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
I+V TPGR+ +LDE D+ML+ L D++ IF P +Q
Sbjct: 142 GA-QILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLK-LGFMEDLEVIFAALPESRQ 199
Query: 784 VMMFSAXLSKEIRPVCK 834
++FSA L IR + +
Sbjct: 200 TVLFSATLPHSIREIAE 216
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 123 bits (296), Expect = 7e-27
Identities = 68/200 (34%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF L+ E+L+AI+ GFE PS+VQ IP A+ D++CQAKSG GKTAVFVL+ L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHM 189
Query: 433 LEPSES--HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVF--FGGMPIQKDEEVLK 600
++P + V LV+C+T ELA QI KE+ RF+ + ++ + GG+ + LK
Sbjct: 190 IDPQAAPHKVQALVLCNTHELAMQIYKEFTRFAINLPDIKDKILCAIGGVTVSLHVRALK 249
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
+ I VGT GR+ +LDE D + + D + + + P
Sbjct: 250 SKDVSIAVGTIGRVSDLVERGALDLSFIKYLVLDEFDALFKEEDNFKKIAGLISKMPATH 309
Query: 781 QVMMFSAXLSKEIRPVCKNL 840
Q ++F+A ++ +++
Sbjct: 310 QTLLFTATFTEHSEKFARSI 329
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 122 bits (294), Expect = 1e-26
Identities = 70/194 (36%), Positives = 100/194 (51%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
S F F + +A+ D F PS +Q + IP + G D + A++G GKTA F L L
Sbjct: 6 SNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPIL 65
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
Q L P S L++ TRELA Q+++++E SKY V ++V GG + + L++
Sbjct: 66 QNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSG 125
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
+VVGTPGRIL FILDE D+ML + DV+ I P KQ+
Sbjct: 126 A-QVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLR-MGFIEDVETILEKLPEKKQM 183
Query: 787 MMFSAXLSKEIRPV 828
+FSA + IR +
Sbjct: 184 ALFSATMPYRIRQI 197
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 122 bits (293), Expect = 2e-26
Identities = 67/199 (33%), Positives = 110/199 (55%), Gaps = 1/199 (0%)
Frame = +1
Query: 241 HSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLA 420
+ +GF DF IL ++ + G+++P+ +Q IP+ +LG D+L QA++G GKTA F L
Sbjct: 49 NENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALP 108
Query: 421 TLQQL-EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
+++L + E + VLVM TRELA Q+++ ++ +S + + +GG + L
Sbjct: 109 LIEKLADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYAL 168
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
K +VVGTPGRI+ +LDE D+ML ++ D++ I P
Sbjct: 169 KRKV-DVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEML-NMGFLEDIEWIIDQLPKN 226
Query: 778 KQVMMFSAXLSKEIRPVCK 834
KQ+++FSA + EIR + K
Sbjct: 227 KQMVLFSATMPNEIRNIAK 245
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 121 bits (292), Expect = 2e-26
Identities = 68/194 (35%), Positives = 105/194 (54%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
FR+ L +L+++ GFE + +Q E IP A+ G DI+ QA++G GKTA F L L +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ + V +V+ TRELA Q+ +E + K+ VR+ +GG I + LK P
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRALKKH-P 121
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HI+VGTPGRIL +LDE D+ML ++ D++ I + P Q ++
Sbjct: 122 HIIVGTPGRILDHINRKTLRLQNVETVVLDEADEML-NMGFIEDIEAILTDVPETHQTLL 180
Query: 793 FSAXLSKEIRPVCK 834
FSA + IR + +
Sbjct: 181 FSATMPDPIRRIAE 194
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 121 bits (291), Expect = 3e-26
Identities = 72/197 (36%), Positives = 109/197 (55%), Gaps = 2/197 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D LK +L+AI D GFE PS++Q E IP A+ G DI+ QA++G GKTA F A +
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 433 LEPS--ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
+ S + L++ TRELA Q+++E R K+ + V +GG PI + LK
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKH-EKLSVLPIYGGQPIDRQIRALKNG 124
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
IVVGTPGR+L +LDE D+ML ++ D++EI ++ +Q
Sbjct: 125 V-DIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEML-NMGFIDDLEEIVKSLKTDRQT 182
Query: 787 MMFSAXLSKEIRPVCKN 837
++FSA + +I+ + +N
Sbjct: 183 LLFSATMPPQIKKLARN 199
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 121 bits (291), Expect = 3e-26
Identities = 65/195 (33%), Positives = 109/195 (55%), Gaps = 1/195 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+ F +P I A+ + GFE P+EVQ + IP G ++ Q+++G GKT F+L + +
Sbjct: 4 FKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPLMDK 63
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKY-MSGVRVSVFFGGMPIQKDEEVLKTAC 609
++P+ V +++ +RELA QI +E ++ +++ +RVS F GG Q+ LK
Sbjct: 64 VKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLKHQQ 123
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
PH+V+GTPGRIL F++DE D L+ + +V +I P Q++
Sbjct: 124 PHVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLD-MGFLAEVDQIAGRLPEKLQML 182
Query: 790 MFSAXLSKEIRPVCK 834
+FSA + +++RP K
Sbjct: 183 VFSATIPEKLRPFLK 197
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 121 bits (291), Expect = 3e-26
Identities = 71/201 (35%), Positives = 105/201 (52%)
Frame = +1
Query: 232 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 411
+S S+GF L +LRAI + G+E PS +Q + IP + G D+L A++G GKTA F
Sbjct: 1 MSESSTGFASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAF 60
Query: 412 VLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
L L + + VLV+ TRELA Q++ E +SK+ S V+V+ +GG
Sbjct: 61 TLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFR 120
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
LK P VVGTPGR++ +LDE D+ML + DV + P
Sbjct: 121 ALKQG-PQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLR-MGFIDDVDWVLDQVP 178
Query: 772 HGKQVMMFSAXLSKEIRPVCK 834
+Q+ +FSA + K+I+ V +
Sbjct: 179 EKRQIALFSATMPKQIKAVAE 199
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 120 bits (288), Expect = 7e-26
Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM--DILCQAKSGMGKTAVFVLATL 426
F + + PEI +AI + G+E+P VQ E IP +LG D++ A++G GKTA F L L
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPY-LLGENNDVVALAQTGTGKTAAFGLPLL 62
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
QQ++ L++C TREL QI+ + +SKY+ G++V +GG I LK
Sbjct: 63 QQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKRG 122
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
HI+V TPGR+L ++DE D+ML ++ + I + P +
Sbjct: 123 V-HIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEML-NMGFTDSINAILADVPKERNT 180
Query: 787 MMFSAXLSKEIRPVCKN 837
++FSA +S EI + KN
Sbjct: 181 LLFSATMSPEIARISKN 197
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 119 bits (287), Expect = 9e-26
Identities = 61/195 (31%), Positives = 105/195 (53%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L P + R I G+ + +E+Q + IP A+ DI+ ++ +G GKT F++ LQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L +++C T ELA QI ++ +F+ Y+ GV ++ GG IQ+ L+ +
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYALRKS-- 120
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+I+VGTPGRI +LDE D+ML+ + + D+ ++F+N P+ Q ++
Sbjct: 121 NIIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLK-MGFKTDLDKVFQNAPNKYQTLL 179
Query: 793 FSAXLSKEIRPVCKN 837
FSA + K++ + N
Sbjct: 180 FSATMPKQVLEIANN 194
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 119 bits (287), Expect = 9e-26
Identities = 67/194 (34%), Positives = 107/194 (55%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F +F + +I RA+ D GFE + +Q +P + GMD++ +A++G GKTA F + L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
LE +E L++C TREL Q+S+E +R KYM V+V +GG I L+
Sbjct: 66 LE-AERVPQALIICPTRELCLQVSEEIKRIGKYMK-VKVLAVYGGQSIGNQIAQLRRGV- 122
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
H++V TPGR++ +LDE D+ML ++ D++ I + P +Q M+
Sbjct: 123 HVIVATPGRLIDHIERGTVDLGGISTVVLDEADEML-NMGFIDDIERILSHVPERRQTML 181
Query: 793 FSAXLSKEIRPVCK 834
FSA +SK I + +
Sbjct: 182 FSATVSKPILRIAR 195
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 119 bits (286), Expect = 1e-25
Identities = 61/183 (33%), Positives = 97/183 (53%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L ++L +++CGF PS +QH+ IP G D++ +AKSG GKTAVF + L+
Sbjct: 26 FSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALEM 85
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ S V V+++ TRE+A QI + + G++V F GG+ + D + L
Sbjct: 86 IDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAMDIDRKKLSNC-- 143
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HI +G PGR+ F+LDE DK++E ++D+ I+ P +QV+
Sbjct: 144 HIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEE-SFQKDINYIYAKLPPNRQVIS 202
Query: 793 FSA 801
SA
Sbjct: 203 SSA 205
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 119 bits (286), Expect = 1e-25
Identities = 69/193 (35%), Positives = 92/193 (47%)
Frame = +1
Query: 223 GSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 402
G V + F LL +L + GFE PS VQ + IP G+D++ QAKSG GKT
Sbjct: 55 GDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKT 114
Query: 403 AVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQK 582
VF L L +L++ TRE+A QI M G+ VF GG P+ +
Sbjct: 115 CVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQ 174
Query: 583 DEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFR 762
D+ LK HI VG+PGRI FILDE DK+LE + + I+
Sbjct: 175 DKTRLKKC--HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYS 232
Query: 763 NPPHGKQVMMFSA 801
+ P KQ++ SA
Sbjct: 233 SLPASKQMLAVSA 245
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 119 bits (286), Expect = 1e-25
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
+ D+ LK ++L+ I GFE PS +Q I + G DI QA+SG GKT F +A LQ
Sbjct: 40 WEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQI 99
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ S+ +LV+ TRE+A Q + +E +M G RV++ GG PI D+ L+ P
Sbjct: 100 CDMSQDVTQILVLASTREIAAQNAARFEDLGCFM-GARVALLSGGSPIAADKVALEKK-P 157
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK--QV 786
HIVVGTPGR+ F++DE D+ML++ + V+ IFR + Q+
Sbjct: 158 HIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKA-GFQEQVKSIFRRITNKDEVQI 216
Query: 787 MMFSAXLSKE 816
MFSA +E
Sbjct: 217 AMFSATYDEE 226
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 118 bits (284), Expect = 2e-25
Identities = 65/196 (33%), Positives = 103/196 (52%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
SGF F +L+ + D G+ PS +Q P+ +LG D++ QA++G GKTA F L L
Sbjct: 71 SGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLL 130
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
++LE + VLV+ TRELA Q++ ++ ++ ++V +GG + L+
Sbjct: 131 ERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRG 190
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
+VVGTPGR++ +LDE D+ML + DV+ I P +QV
Sbjct: 191 V-DVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLR-MGFIDDVEWILEQLPKERQV 248
Query: 787 MMFSAXLSKEIRPVCK 834
++FSA + EIR + K
Sbjct: 249 VLFSATMPPEIRRLSK 264
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 118 bits (284), Expect = 2e-25
Identities = 68/193 (35%), Positives = 92/193 (47%)
Frame = +1
Query: 223 GSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 402
G + + F LL +L + GFE PS VQ + IP G+D++ QAKSG GKT
Sbjct: 54 GDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKT 113
Query: 403 AVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQK 582
VF L L +L++ TRE+A QI M G+ VF GG P+ +
Sbjct: 114 CVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQ 173
Query: 583 DEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFR 762
D+ LK HI VG+PGRI FILDE DK+LE + + I+
Sbjct: 174 DKTRLKKC--HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYS 231
Query: 763 NPPHGKQVMMFSA 801
+ P KQ++ SA
Sbjct: 232 SLPASKQMLAVSA 244
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 118 bits (283), Expect = 3e-25
Identities = 65/192 (33%), Positives = 104/192 (54%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L+ +L A+ + G+E PS +Q CIP + G D+L +A++G GKTA F L L +
Sbjct: 46 FAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLDR 105
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L+ + + VLV+ TRELA Q+++ ++R++K + G V +GG + L
Sbjct: 106 LDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGA- 164
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
H++VGTPGR++ +LDE D+ML + DV+ I ++ P +Q +
Sbjct: 165 HVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLR-MGFIDDVEWILQHTPAERQTAL 223
Query: 793 FSAXLSKEIRPV 828
FSA + IR V
Sbjct: 224 FSATMPDAIRRV 235
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 117 bits (282), Expect = 3e-25
Identities = 61/189 (32%), Positives = 103/189 (54%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F LL +I + + GF+ PS +Q + IP G D++ ++KSG GKT VF L+
Sbjct: 26 FASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTGKTLVFSTIALET 85
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ ++ H+ VL++ TRE+A QI +++G+++ F GG P++ D + K++
Sbjct: 86 VNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDD--LKKSSKC 143
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HI VG PGR+ F+LDE DK++E + D+ EI+ + P KQ+++
Sbjct: 144 HIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEE-SFQSDINEIYNSLPPRKQMIV 202
Query: 793 FSAXLSKEI 819
SA +E+
Sbjct: 203 SSATYPQEL 211
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 117 bits (282), Expect = 3e-25
Identities = 60/189 (31%), Positives = 106/189 (56%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
+ P I +A+ G S +Q + +P A+ G D++ QA++G GKT FV+ L+++E ++
Sbjct: 11 INPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEVND 70
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 627
+++C TRELA Q++++ +K + ++V+ GG P+ + LK + PHI+VG
Sbjct: 71 FSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHS-PHIIVG 129
Query: 628 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXL 807
TPGR++ +LDE D+ML+ + D++ IF P Q ++FSA
Sbjct: 130 TPGRVMDHVEKRRIDLRNVKLRVLDEADRMLD-MGFEDDLRIIFGQTPKQVQTLLFSATF 188
Query: 808 SKEIRPVCK 834
+++I V K
Sbjct: 189 TEQIERVAK 197
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 117 bits (282), Expect = 3e-25
Identities = 67/195 (34%), Positives = 107/195 (54%)
Frame = +1
Query: 250 GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ 429
GF +F L+ E++ +I G+ P+EVQ IP A+ G D++ ++K+G GKTA +++ +
Sbjct: 3 GFEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIIN 62
Query: 430 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
E + L++ TRELA Q++K E K SG+R V +GG+ I K E++
Sbjct: 63 N-TAKEKGIRALILLPTRELAVQVAKVSEALGK-RSGIRTVVVYGGVSINKQIELILRGA 120
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
+I+VGTPGR L F+LDE D+ML+ + D+++I P +Q
Sbjct: 121 -NIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLD-MGFIEDIKKIINVLPVERQSF 178
Query: 790 MFSAXLSKEIRPVCK 834
+FSA + EI + K
Sbjct: 179 LFSATIPSEIIELAK 193
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 117 bits (281), Expect = 5e-25
Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
+GF + L+PE+LR++ G+E P+ +Q E +P V G D+L QA +G GKTA F L L
Sbjct: 57 AGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLL 116
Query: 427 QQLEPSESHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
+L + + LV+ TRELA Q+S+ R+ + + G RV +GG PI + L
Sbjct: 117 HRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDL-GARVLPVYGGAPIGRQVRAL 175
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
+VV TPGR L +LDE D+ML+ + D+ I P
Sbjct: 176 VQGV-DVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLD-MGFAEDIDAILEQAPQK 233
Query: 778 KQVMMFSAXLSKEIRPVCK 834
+Q ++FSA L + + +
Sbjct: 234 RQTVLFSATLPPRMDQIAR 252
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 117 bits (281), Expect = 5e-25
Identities = 62/192 (32%), Positives = 100/192 (52%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L +LR + + G+E PS +Q IP + D+L QA++G GKTA F L L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ ++ LV+ TRELA Q+++ ++R++ Y+ G V +GG L+
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGV- 127
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
H+VVGTPGR++ +LDE D+ML + DV+ I + P +Q +
Sbjct: 128 HVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLR-MGFIDDVETILQKTPESRQTAL 186
Query: 793 FSAXLSKEIRPV 828
FSA + I+ +
Sbjct: 187 FSATMPSAIKRI 198
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 117 bits (281), Expect = 5e-25
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
FR+ L IL+A+ + G+E PS +Q + IP A+ G D+L A++G GKT F LQ+
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 433 LE---PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L P+ + L++ TRELA QI + +E + K++ +R +V FGG+ Q + LK
Sbjct: 63 LGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLP-LRSAVIFGGVGQQPQVDKLKK 121
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
I+V TPGR+L F+LDE D+ML+ + DV+ + + P KQ
Sbjct: 122 GV-DILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLD-MGFLHDVRRVLKLLPAVKQ 179
Query: 784 VMMFSAXLSKEIRPVCKNL 840
+ FSA + E+ + L
Sbjct: 180 TLFFSATMPPEVMDLVNGL 198
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 117 bits (281), Expect = 5e-25
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 1/201 (0%)
Frame = +1
Query: 220 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 396
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 397 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 576
KT VF + ++ L+ SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 577 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 756
+ + LK P IV+GTPGRI F+LDE DK+++ + R D+ I
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEV-FRDDINII 188
Query: 757 FRNPPHGKQVMMFSAXLSKEI 819
+ P +QV +FSA + +
Sbjct: 189 INSLPQIRQVAVFSATYPRNL 209
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 116 bits (280), Expect = 6e-25
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 5/201 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F F PEILRAI +CG+++ + VQ + IP G D+L A++G GKTA F L LQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 433 LEP-----SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
+ S+ L++ TRELA Q++ +SK+M+ + V +GGM + + L
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMN-ISVLTIYGGMKMATQAQKL 121
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
K I+V TPGR+L +LDE D+ML+ + D+Q+I +
Sbjct: 122 KQGA-DIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLD-MGFSTDIQKILQAVNKK 179
Query: 778 KQVMMFSAXLSKEIRPVCKNL 840
+Q ++FSA S ++ + ++
Sbjct: 180 RQNLLFSATFSTAVKKLANDM 200
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 116 bits (279), Expect = 8e-25
Identities = 64/194 (32%), Positives = 106/194 (54%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + + EI +AI++ GFE PS +Q + IP + G D++ QA++G GKTA F + +++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ HV L++ TRELA Q+S E ++ SK+ +R +GG I + LK
Sbjct: 68 VSTGR-HVQALILTPTRELAIQVSGEIQKLSKHKK-IRTLPIYGGQSIVHQIKALKQGV- 124
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+V+GTPGRI+ ILDE D+ML+ + D++ I R + +Q ++
Sbjct: 125 QVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLD-MGFIDDIESILRQVKNERQTLL 183
Query: 793 FSAXLSKEIRPVCK 834
FSA + I+ + +
Sbjct: 184 FSATMPPAIKKLSR 197
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 116 bits (279), Expect = 8e-25
Identities = 62/191 (32%), Positives = 104/191 (54%)
Frame = +1
Query: 250 GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ 429
GF D L I A+ + G+ +P+ VQ A+ G D++ ++K+G GKTA F L L+
Sbjct: 30 GFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLE 89
Query: 430 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
++ E V L++C TRELA Q++ E + +K+ G++++ +GG +++ E+ L+
Sbjct: 90 KIPADERRVRALILCPTRELALQVADELKMLAKH-KGLKIAAIYGGASMKQQEDALEEGT 148
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
P I+VGTPGR+ +LDE D+ML +V I P +QV+
Sbjct: 149 P-IIVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQ-GFYEEVTRILDRLPKTRQVL 206
Query: 790 MFSAXLSKEIR 822
+FSA + +I+
Sbjct: 207 LFSATVPTDIQ 217
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 116 bits (279), Expect = 8e-25
Identities = 62/199 (31%), Positives = 102/199 (51%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
S F L ++++ + G+E +E+Q +P + G D++ QAK+G GKTA F L
Sbjct: 3 SKDFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGV 62
Query: 424 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L +L + + VL++C TREL Q+SK ++ M +++ GGMP + + +
Sbjct: 63 LSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAH 122
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
HIVVGTPGRIL +LDE D+ML+ + + ++ I +Q
Sbjct: 123 GA-HIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLD-MGFQDEIDAIIDQTNKQRQ 180
Query: 784 VMMFSAXLSKEIRPVCKNL 840
++FSA K+I + K +
Sbjct: 181 TLLFSATYPKKIATIAKRV 199
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 116 bits (279), Expect = 8e-25
Identities = 64/194 (32%), Positives = 107/194 (55%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F++ L E+++AI GFE + +Q + IP ++ D++ QA++G GKTA F + +++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ S V LV+ TRELA Q+S+E + + VRV +GG I++ LK P
Sbjct: 64 VNVKNSAVQALVVAPTRELAIQVSEELYKIGA-VKRVRVLPIYGGQDIERQIRALKKH-P 121
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
H++VGTPGRI+ +LDE D+ML ++ D++ I + P +Q ++
Sbjct: 122 HVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEML-NMGFIEDIEAILSHVPAERQTLL 180
Query: 793 FSAXLSKEIRPVCK 834
FSA + IR + +
Sbjct: 181 FSATMPDPIRRIAE 194
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 116 bits (279), Expect = 8e-25
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F LL +L + GF+ PS +Q + IP G+D++ QAKSG GKT VF L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L + VLV+ TRE+A QI M G+ VF GG PI +D++ LK
Sbjct: 88 LILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKKC-- 145
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE---SLDMRRDVQEIFRNPPHGKQ 783
HI +G+PGRI F+LDE DK+LE S + + I+ + P KQ
Sbjct: 146 HIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQ 205
Query: 784 VMMFSA 801
++ SA
Sbjct: 206 MLALSA 211
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 116 bits (278), Expect = 1e-24
Identities = 63/196 (32%), Positives = 102/196 (52%)
Frame = +1
Query: 232 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 411
V + + F L PE+L + + GFE + +Q E IP + G DI+ QAK+G GKTA F
Sbjct: 42 VPVSQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAF 101
Query: 412 VLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
L L ++ + + L++C TRELA Q+ E + + + G++V GG ++ +
Sbjct: 102 SLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQAD 161
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
L+ IVVGTPGR+ +LDE DKML+ + +++ + R+ P
Sbjct: 162 ALENGV-QIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLD-MGFADEIKTVMRDLP 219
Query: 772 HGKQVMMFSAXLSKEI 819
+Q ++FSA + I
Sbjct: 220 GSRQTVLFSATFPESI 235
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 116 bits (278), Expect = 1e-24
Identities = 66/192 (34%), Positives = 104/192 (54%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
++ F + L PE L A+ GFEHP+ +Q + IP A+ G D++ A +G GKTA F+L
Sbjct: 3 TTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPL 62
Query: 424 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
+ +L + LV+ TRELA QI +E ERF + VR +V GG+ + + E L+
Sbjct: 63 IDRL-AGKPGTRALVLAPTRELALQIGEELERFG-HARRVRGAVIIGGVGMAQQAEALRQ 120
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
IV+ TPGR++ +LDE D+ML+ + + + I R P +Q
Sbjct: 121 K-REIVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLD-MGFKPQLDRILRRLPKQRQ 178
Query: 784 VMMFSAXLSKEI 819
++FSA ++ E+
Sbjct: 179 TLLFSATMAGEV 190
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 116 bits (278), Expect = 1e-24
Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L I +A+ + G++ PS +Q + IP + G D++ A++G GKTA F L L+
Sbjct: 3 FSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 433 LEPSES----HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
L + LV+ TRELA Q+S+ E + KY+ +R +V FGG+PI + L+
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLR 121
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
++V TPGR+L +LDE D+ML+ + RD+++I P +
Sbjct: 122 HGVD-VLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLD-MGFIRDIKKILAMLPAKR 179
Query: 781 QVMMFSAXLSKEIRPVCKNL 840
Q +MFSA S EIR + K L
Sbjct: 180 QNLMFSATFSDEIRELAKGL 199
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 116 bits (278), Expect = 1e-24
Identities = 64/190 (33%), Positives = 99/190 (52%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D + P +LRAI D G+E P+ +Q IP + G D++ A++G GKTA F + L +
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ + LV+ TRELA Q+++ + R+ Y+S + V +GG L+
Sbjct: 75 IDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA- 133
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+VVGTPGR++ +LDE D+ML ++ DV+ I P KQV +
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEML-TMGFADDVERILSETPEYKQVAL 192
Query: 793 FSAXLSKEIR 822
FSA + IR
Sbjct: 193 FSATMPPAIR 202
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 115 bits (277), Expect = 1e-24
Identities = 66/190 (34%), Positives = 100/190 (52%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + + E + + GF P+ +Q + IPQ + G D++ Q+++G GKTA F L L++
Sbjct: 5 FPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILER 64
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L+P + V +V+ TRELA Q+ +F SG+R +GG I + LK
Sbjct: 65 LDPQQKAVQAIVLTPTRELAIQVHDAMAQFVG-NSGLRTLAIYGGQSIDRQMLQLKRGV- 122
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HIVVGTPGR++ F+LDE D+ML S+ DV++I P +Q +
Sbjct: 123 HIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEML-SMGFIDDVEKILSQAPQDRQTAL 181
Query: 793 FSAXLSKEIR 822
FSA + IR
Sbjct: 182 FSATMPPSIR 191
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 115 bits (277), Expect = 1e-24
Identities = 66/185 (35%), Positives = 105/185 (56%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
LK ++L+ I + GFE P+ +Q + IP A+ G+D++ QA++G GKTA F + L ++ E
Sbjct: 11 LKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNRVIKGE 70
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 627
+ LV+C TRELA Q+++E S+ M ++V +GG I+ L+ P I+VG
Sbjct: 71 G-LQALVLCPTRELAVQVTEEISSLSRRMR-IQVLAIYGGQSIELQLRSLRRN-PEIIVG 127
Query: 628 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXL 807
TPGR++ +LDE D+ML+ + D+Q+I P +Q +FSA L
Sbjct: 128 TPGRLMDHMNRGTISLSPLKYVVLDEADEMLD-MGFLPDIQKILSQCPRERQTFLFSATL 186
Query: 808 SKEIR 822
E+R
Sbjct: 187 PDEVR 191
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 115 bits (277), Expect = 1e-24
Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAV-LGMDILCQAKSGMGKTAVFVLATLQ 429
F L +LRAI+D GFE+P+EVQ + IP + +D++ A++G GKTA F +Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 430 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
+++ + + L++ TREL QI+ E + +SKY G+ V +GG I + +K
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
I+V TPGR+ ILDE D+ML ++ D+ I P K
Sbjct: 124 -QIIVATPGRMQDMINRRLVDISQINYCILDEADEML-NMGFYEDIVNILSTTPDEKNTW 181
Query: 790 MFSAXLSKEIRPVCK 834
+FSA + E+ + K
Sbjct: 182 LFSATMPAEVARIGK 196
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 115 bits (276), Expect = 2e-24
Identities = 62/175 (35%), Positives = 97/175 (55%)
Frame = +1
Query: 277 EILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHV 456
+IL + CGF+ PS +Q + IP G D++ +AKSG GKT VF + +L+ ++ S V
Sbjct: 6 KILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDIDISSV 65
Query: 457 YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 636
VL++ TRE+A QI++ + + ++V VF GG+ I+ D++ + I VG PG
Sbjct: 66 QVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKVNNC--QIAVGAPG 123
Query: 637 RILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSA 801
RI F+LDE DK++E+ ++D+ IF P KQV+ SA
Sbjct: 124 RIRHLIDKGFLKVENVRLFVLDEADKLMET-SFQKDINYIFSKLPLSKQVIASSA 177
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 115 bits (276), Expect = 2e-24
Identities = 72/196 (36%), Positives = 107/196 (54%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF LK I A+ + GF+ PS VQ + IP + G D++ QA++G GKTA F L +
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ ++ V LV+ TRELA Q+S E RF K +SG++ + +GG K E +K A
Sbjct: 63 MK-ADGSVEGLVIVPTRELAMQVSDELFRFGK-LSGLKTATVYGGTAYGKQIERIKQA-- 118
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
IVV TPGR L +LDE D+ML+ + +++ IF P +Q +M
Sbjct: 119 SIVVATPGR-LQDLLMSGKIKLNPHFVVLDEADEMLD-MGFLDEIKNIFTFLPKERQTLM 176
Query: 793 FSAXLSKEIRPVCKNL 840
FSA + IR + + +
Sbjct: 177 FSATMPNGIRKLAEQI 192
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 115 bits (276), Expect = 2e-24
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVL-GMDILCQAKSGMGKTAVFVLATLQQLEPS 444
L +L+AI D GFE PS++Q E IPQ + D++ A++G GKTA F LQ ++ S
Sbjct: 8 LNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLLQNIDAS 67
Query: 445 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 624
L++ TREL QI+ E + ++K++ GVRV +GG IQ+ + IVV
Sbjct: 68 SKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRGA-QIVV 126
Query: 625 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAX 804
TPGR+ +LDE D+ML ++ D+ I + P K +FSA
Sbjct: 127 ATPGRMQDMMRRRMVDITKLSYCVLDEADEML-NMGFYEDITNILADTPEDKLTWLFSAT 185
Query: 805 LSKEIRPVCK 834
+ +E+ + K
Sbjct: 186 MPREVARIAK 195
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 114 bits (275), Expect = 2e-24
Identities = 64/189 (33%), Positives = 106/189 (56%)
Frame = +1
Query: 235 SIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFV 414
S + F D+ LK E+L I + G+E PS +Q E IP A+ G DIL +AK+G GK+ ++
Sbjct: 78 STKGNEFEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYL 136
Query: 415 LATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 594
+ L++L+ + ++ +V+ TRELA Q+S+ + SK+M G +V GG + +D+ +
Sbjct: 137 IPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNL-RDDVM 195
Query: 595 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPH 774
H+V+ TPGRIL +LDE DK+L S D + ++ P
Sbjct: 196 RLDDTGHVVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLL-SQDFVQIMEAFILTLPK 254
Query: 775 GKQVMMFSA 801
+Q++++SA
Sbjct: 255 NRQILLYSA 263
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 114 bits (275), Expect = 2e-24
Identities = 68/219 (31%), Positives = 118/219 (53%), Gaps = 3/219 (1%)
Frame = +1
Query: 193 TEVAPKKEVKGSYVSIH---SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM 363
+E +P +K S H + GF F LK +L+ I + GF PS VQ + IP + G
Sbjct: 24 SEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGK 83
Query: 364 DILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGV 543
D++ QA++G GKTA F + L L ++ + L++ TRELA QIS+E + ++ +
Sbjct: 84 DLIAQAQTGTGKTAAFAIPILNTLNRNKD-IEALIITPTRELAMQISEEILKLGRF-GRI 141
Query: 544 RVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 723
+ +GG I++ ++L+ P ++ TPGR+L +LDE D+ML+
Sbjct: 142 KTICMYGGQSIKRQCDLLEKK-PKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLD 200
Query: 724 SLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCKNL 840
+ D++EIF+ P+ +Q ++FSA + + I+ + +
Sbjct: 201 -MGFLDDIEEIFKFLPNTRQTLLFSATMPEPIKALAMKI 238
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 114 bits (275), Expect = 2e-24
Identities = 62/191 (32%), Positives = 100/191 (52%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
L P + I G+ + VQ + +P + G+D++ QA +G GKTA F L LQ+L+P+
Sbjct: 33 LSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPAL 92
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 627
+ LV+C TRELA Q+ K+ + + + +++ V GGMP+ L+ PH+VVG
Sbjct: 93 TRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPHVVVG 152
Query: 628 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXL 807
TPGRI +LDE D+ML+ + ++EI +Q ++FSA
Sbjct: 153 TPGRIQELARKRALHLGGVRTLVLDEADRMLD-MGFEEPIREIASRCDKHRQSLLFSATF 211
Query: 808 SKEIRPVCKNL 840
IR + + +
Sbjct: 212 PDIIRTLAREI 222
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 114 bits (275), Expect = 2e-24
Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L I +A+ + G++ PS +Q + IP + G D++ A++G GKTA F L L+
Sbjct: 3 FSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 433 LEPSES----HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
L + LV+ TRELA Q+S+ E + KY+ +R +V FGG+PI + L+
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLR 121
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
++V TPGR+L +LDE D+ML+ + RD+++I P +
Sbjct: 122 HGVD-VLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLD-MGFIRDIKKILALLPAKR 179
Query: 781 QVMMFSAXLSKEIRPVCKNL 840
Q +MFSA S EIR + K L
Sbjct: 180 QNLMFSATFSDEIRELAKGL 199
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 114 bits (275), Expect = 2e-24
Identities = 59/192 (30%), Positives = 103/192 (53%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L P +L+ + G+E P+ +Q + I Q + G D+L A++G GKTA F L L +
Sbjct: 7 FADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSR 66
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ +++ LV+C TRELA Q+++ ++ +++ + V +GG ++ LK P
Sbjct: 67 IDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQN-P 125
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
++VGTPGR++ +LDE D+ML + D+ I + P KQ +
Sbjct: 126 QVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLR-MGFIEDIDWILEHTPKDKQTAL 184
Query: 793 FSAXLSKEIRPV 828
FSA + +I+ +
Sbjct: 185 FSATMPHQIKRI 196
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 114 bits (274), Expect = 3e-24
Identities = 67/205 (32%), Positives = 113/205 (55%), Gaps = 4/205 (1%)
Frame = +1
Query: 232 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 411
VS H+ F + L +LRA G++ P+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 162 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAF 221
Query: 412 VLATLQQLEPSESHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQK 582
L TL++L V+ VL++ TRELA QI + +++ + ++ + GG+ +++
Sbjct: 222 ALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQF-TDIKCGLIVGGLSVRE 280
Query: 583 DEEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIF 759
E VL+ + P IVV TPGR++ ILDE D++L++ ++ E+
Sbjct: 281 QEVVLR-SMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQT-GFATEITELV 338
Query: 760 RNPPHGKQVMMFSAXLSKEIRPVCK 834
R P +Q M+FSA +++E++ + K
Sbjct: 339 RLCPKRRQTMLFSATMTEEVKELVK 363
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 113 bits (273), Expect = 4e-24
Identities = 62/195 (31%), Positives = 100/195 (51%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
++ F L E L + + G+ + VQ +P + G D+ +AK+G GKTA F +
Sbjct: 3 TTSFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGL 62
Query: 424 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L ++ S+ LV+C TRELA Q+SKE R +++ +++ GG P+ + + L
Sbjct: 63 LDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVH 122
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
A PHIVVGTPGRI +LDE D+ML+ + + ++ P +Q
Sbjct: 123 A-PHIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLD-MGFTDAIDDVISYTPSDRQ 180
Query: 784 VMMFSAXLSKEIRPV 828
++FSA +EI +
Sbjct: 181 TLLFSATYPQEIEQI 195
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 113 bits (272), Expect = 6e-24
Identities = 67/192 (34%), Positives = 97/192 (50%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L IL A+ + GF P+ +Q IP + G D L +A++G GKTA F L L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L S+ +VM TRELA Q++ E + + + G++V +GG I LK+
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGA- 146
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HIVVGTPGR+ FILDE D+ML+ + DV I P Q ++
Sbjct: 147 HIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLK-MGFVDDVTWIMEQAPESAQRVL 205
Query: 793 FSAXLSKEIRPV 828
FSA + ++ +
Sbjct: 206 FSATMPPMVKEI 217
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 113 bits (272), Expect = 6e-24
Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 1/197 (0%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
+GF F L P ++ A+ D + P+++Q IP A+ G DI+ Q+++G GKT F+L +
Sbjct: 2 NGFSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIV 61
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYER-FSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
Q + P + +++ TRELA+QI +E + K ++ S+ GGM ++ +K
Sbjct: 62 QNVNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDYIKTSLITGGMDRERQIGRVKV 121
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
+ P IV+GTPGRIL +I+DE D+ML+ + +V I + P Q
Sbjct: 122 S-PQIVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLD-MGFLPEVDRIAQALPEKLQ 179
Query: 784 VMMFSAXLSKEIRPVCK 834
+M+FSA + ++++P K
Sbjct: 180 MMVFSATIPEKLQPFLK 196
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 113 bits (272), Expect = 6e-24
Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
+ D L E+ A+ + PS +Q IP A+ G D+L QA++G GKTA F + +++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 433 LE--PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
LE P+ + L++ TRELA Q+ E + + + + V +GG P++ E LK A
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLT-HGQRINVVAVYGGKPLRSQMEKLKRA 124
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
PHIVVGTPGR++ +LDE D+ML+ + R D+++I R P +Q
Sbjct: 125 -PHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLD-IGFRPDIEKILRRCPEERQT 182
Query: 787 MMFSAXLSKEIRPVCK 834
++ SA + I + +
Sbjct: 183 LLLSATVPPTIEKLAQ 198
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 113 bits (272), Expect = 6e-24
Identities = 62/194 (31%), Positives = 98/194 (50%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L ++LR I GFE PS +Q + I +LG D+L QA+SG GKT F + LQ+
Sbjct: 58 FEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQR 117
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++P++ V+++ RELA QI + +Y++ + GG Q+ E K
Sbjct: 118 IDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLN-IEAFCCIGGTSTQETREKCKQGV- 175
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HI++ TPGR++ ++DE D+ML+ + EI + P Q+ +
Sbjct: 176 HIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQ-GFSDNFAEILKMVPGDIQIAL 234
Query: 793 FSAXLSKEIRPVCK 834
FSA +EI + K
Sbjct: 235 FSATFPQEIIELSK 248
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 113 bits (272), Expect = 6e-24
Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 11/224 (4%)
Frame = +1
Query: 193 TEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDIL 372
T+ + VK S + + F F L P L+AI D GFE + VQ +P + G D+L
Sbjct: 364 TDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVL 423
Query: 373 CQAKSGMGKTAVFVLATLQQL--EPSESH------VYVLVMCHTRELAFQISKEYERFSK 528
+AK+G GKT F+L ++ + P S + VLV+C TRELA Q + E K
Sbjct: 424 AKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLK 483
Query: 529 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI---LAXXXXXXXXXXXXXXFIL 699
Y + V V GG + ++ ++T I+V TPGR+ + +L
Sbjct: 484 YHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVL 543
Query: 700 DECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVC 831
DE D +L+ + RRD++ I P +Q +FSA + +E+R +C
Sbjct: 544 DEADHLLD-MGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQIC 586
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 113 bits (271), Expect = 7e-24
Identities = 62/177 (35%), Positives = 92/177 (51%)
Frame = +1
Query: 304 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTR 483
G + +Q + IP + G DI+ QAK+G GKT FVL L++++P S V L++ TR
Sbjct: 24 GITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTR 83
Query: 484 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXX 663
ELA QI+ E ++ + V +GG + + LK HIVV TPGR+L
Sbjct: 84 ELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLK-GNTHIVVATPGRLLDHIRRE 142
Query: 664 XXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
+LDE D+ML D+++I P KQ M+FSA + K+I+ + K
Sbjct: 143 TIDLSNLSTIVLDEADQML-YFGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAK 198
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 113 bits (271), Expect = 7e-24
Identities = 65/192 (33%), Positives = 109/192 (56%), Gaps = 2/192 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F++ + ++++ GF+ P+ +Q + IP A+ G+DIL QA++G GKT F + +++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ + V L++ TRELA Q++++ FS+ GV+V FGGMPI++ + LK P
Sbjct: 64 VVGKQG-VQSLILAPTRELAMQVAEQLREFSR-GQGVQVVTVFGGMPIERQIKALKKG-P 120
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLES--LDMRRDVQEIFRNPPHGKQV 786
IVVGTPGR++ ILDE D+M+ +D R + + + P +Q
Sbjct: 121 QIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMD--KIPAVQRQT 178
Query: 787 MMFSAXLSKEIR 822
M+FSA + K I+
Sbjct: 179 MLFSATMPKAIQ 190
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 112 bits (269), Expect = 1e-23
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 8/191 (4%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF L I+R+I D GF + S +Q E +P + G DI+ +A++G GKTA F++ LQ+
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 433 L---EPSE---SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 594
L +P E S L++ TRELA QI+K+ + SKY + + + GG+ K +E
Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKY-ADLNIVTVLGGVDYDKQKEQ 218
Query: 595 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPH 774
L+ +VV TPGR+L ++DE D+ML+ + D++ I R P
Sbjct: 219 LENEVVDVVVATPGRLLDYLQQGIVYLDQVEMLVIDEADRMLD-MGFIPDLKRIIRGTPE 277
Query: 775 G--KQVMMFSA 801
+Q +FSA
Sbjct: 278 KSIRQTQLFSA 288
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 112 bits (269), Expect = 1e-23
Identities = 63/196 (32%), Positives = 101/196 (51%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
S F L IL + G+E PS +Q +CI + DI+ QA++G GKTA FVL L
Sbjct: 12 SKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLL 71
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
++ + + +L++ TRELA Q+S+ + +++ M G V +GG LK
Sbjct: 72 DKINLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRG 131
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
H +VGTPGR++ F+LDE D+ML+ + D++ I + P +Q+
Sbjct: 132 V-HAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLK-MGFIDDIKWIMQRIPEQRQI 189
Query: 787 MMFSAXLSKEIRPVCK 834
+FSA + I+ + K
Sbjct: 190 ALFSATMPNVIKKIAK 205
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 111 bits (268), Expect = 2e-23
Identities = 67/192 (34%), Positives = 98/192 (51%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF LK +++ +V GF P+ +Q + IP + G D++ QA++G GKTA F L L
Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ S+ V LV+ TRELA Q+ +S G V V +GG Q L+
Sbjct: 117 IDFSKKCVQALVLAPTRELAQQVGDALATYSG-DDGRNVLVVYGGSSYQAQVGGLRRGA- 174
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+VVGTPGR+L +LDE D+ML S+ D++ I P +Q M+
Sbjct: 175 RVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEML-SMGFIDDIETILSQTPKDRQTML 233
Query: 793 FSAXLSKEIRPV 828
FSA LS + +
Sbjct: 234 FSATLSSRVMSI 245
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 111 bits (268), Expect = 2e-23
Identities = 66/194 (34%), Positives = 100/194 (51%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L +L + F P+ +Q + IP + G D+L +A++G GKTA F L L +
Sbjct: 10 FNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALAK 69
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ S VLV+ TRELA Q+++ E F+ M GV V+ +GG P + LK
Sbjct: 70 IDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGTA 129
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
IVVGTPGR++ +LDE D+ML ++ D++ I + P+ Q +
Sbjct: 130 -IVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEML-NMGFIEDIETILKAVPNTAQRAL 187
Query: 793 FSAXLSKEIRPVCK 834
FSA + IR + K
Sbjct: 188 FSATMPNAIRKLAK 201
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 111 bits (268), Expect = 2e-23
Identities = 58/184 (31%), Positives = 96/184 (52%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
L+ +++R + F P+++Q IP A+ GMD+L Q+KSG GKT ++V+ LQ S
Sbjct: 32 LRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTGKTLIYVVTALQMCSLST 91
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 627
H VLV+ TRELA Q+ + + + +VS F GG + +D E L+ H+ +G
Sbjct: 92 QHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDVTRDREKLRNC--HVAIG 149
Query: 628 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXL 807
TPGR+L +LDE D++ + +++ V + P +QV+ SA
Sbjct: 150 TPGRLLQLHEKGVLNMSMVKLLVLDEADQLYVTASLQKTVNALIAVLPLQRQVIACSATF 209
Query: 808 SKEI 819
+ +
Sbjct: 210 DQNL 213
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 111 bits (268), Expect = 2e-23
Identities = 60/194 (30%), Positives = 105/194 (54%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+DF L ++++AI GFE + +Q + IP + D++ QA++G GKTA F + +++
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ P ++ +V+ TRELA Q+S+E + + +V +GG I + LK P
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQ-DKRAKVLPIYGGQDIGRQIRALKKN-P 122
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+I+VGTPGR+L ++DE D+ML ++ D++ I N P Q ++
Sbjct: 123 NIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEML-NMGFIDDIESILSNVPSEHQTLL 181
Query: 793 FSAXLSKEIRPVCK 834
FSA + I+ + +
Sbjct: 182 FSATMPAPIKRIAE 195
>UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Polynucleobacter sp. QLW-P1DMWA-1
Length = 500
Score = 111 bits (267), Expect = 2e-23
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Frame = +1
Query: 211 KEVKGSYVSIHSSG--FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAK 384
KE K S+G F++F L +L+ + + GF + VQ + IP A+ G D+L ++
Sbjct: 5 KETKIESKDSKSTGTEFQNFALAASLLKNVAELGFTQATSVQAQVIPAALAGGDLLVSSQ 64
Query: 385 SGMGKTAVFVLATLQQL---EPSESHV------YVLVMCHTRELAFQISKEYERFSKYMS 537
+G GKTA F+L + QL P+ S V VLV+C TRELA Q++ + + M
Sbjct: 65 TGSGKTAAFLLPLINQLIEDNPNNSPVPGRAQPKVLVLCPTRELAQQVAADAVNLVRGMK 124
Query: 538 GVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKM 717
G+R++ GGMP K + LK A +VV TPGR+L ++DE D+M
Sbjct: 125 GIRIATVMGGMPYGKQIQALKGAL--LVVATPGRLLDLCDSKAIRLDDVKQLVIDEADRM 182
Query: 718 LESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCKNL 840
L+ + D++ I + Q +MFSA + +I + L
Sbjct: 183 LD-MGFADDLEAIDKRCAGRNQTLMFSATFAPKIMSLANEL 222
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 111 bits (267), Expect = 2e-23
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 6/197 (3%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
L P+ILRA+ + G+ P+ +Q + IP + G D++ A++G GKTA F L LQ L +
Sbjct: 8 LSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQ 67
Query: 448 SH------VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
H V L++ TRELA QI + +SKY++ +R V FGG+ I L+
Sbjct: 68 PHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMMKLRGGV 126
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
++V TPGR+L +LDE D+ML+ + D++ + P +Q +
Sbjct: 127 -DVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLD-MGFIHDIRRVLTKLPAKRQNL 184
Query: 790 MFSAXLSKEIRPVCKNL 840
+FSA S +I+ + + L
Sbjct: 185 LFSATFSDDIKALAEKL 201
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 111 bits (267), Expect = 2e-23
Identities = 60/188 (31%), Positives = 97/188 (51%)
Frame = +1
Query: 265 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPS 444
+L P L + + G+ + VQ +P + G D+ QAK+G GKTA F L LQQ++ S
Sbjct: 9 VLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDAS 68
Query: 445 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 624
LV+C TRELA Q++ E R ++++ ++ GG P + L+ A PHI+V
Sbjct: 69 LFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHA-PHIIV 127
Query: 625 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAX 804
TPGR+L ++DE D+ML+ + + ++ R P +Q ++FSA
Sbjct: 128 ATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD-MGFSDAIDDVIRFAPASRQTLLFSAT 186
Query: 805 LSKEIRPV 828
+ I +
Sbjct: 187 WPEAIAAI 194
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 111 bits (266), Expect = 3e-23
Identities = 65/194 (33%), Positives = 105/194 (54%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+ L +L+A+ D GFE P+ +Q E IP + G +++ QA +G GKTA ++L LQ+
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ + VL++ TRELA Q++ E + KY+ VR +GG I++ L+
Sbjct: 64 IQRGKK-AQVLIVTPTRELALQVADEVAKLGKYLK-VRALAVYGGQAIERQIRGLRQGV- 120
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
++VGTPGRIL ILDE D+ML+ + D++ I + +Q ++
Sbjct: 121 EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLD-MGFIDDIEAILNTLTNRQQTLL 179
Query: 793 FSAXLSKEIRPVCK 834
FSA L I+ + K
Sbjct: 180 FSATLPAPIKTIIK 193
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 111 bits (266), Expect = 3e-23
Identities = 69/203 (33%), Positives = 109/203 (53%), Gaps = 9/203 (4%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L ++++I + GFE+ SE+Q E +P +LG DI+ QA++G GKTA F++A +
Sbjct: 73 FHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLGYDIIGQAQTGTGKTAAFLIAMISD 132
Query: 433 -----LEPSESHVYV--LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
LE ++ + L++ TRELA QI+ E + + + V GG+ +K +
Sbjct: 133 FLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKLTSNCH-LNVVTLVGGLSYEKQKI 191
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
L+T I+V TPGR+L +LDE D+ML S+ DV+ I R P
Sbjct: 192 ALETENVDILVATPGRLLDFARSRKVQLGKVECLVLDEADRML-SMGFIPDVKSIIRMTP 250
Query: 772 H--GKQVMMFSAXLSKEIRPVCK 834
H +Q M+FSA K+I+ + +
Sbjct: 251 HKETRQTMLFSATFPKDIQALAQ 273
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 110 bits (265), Expect = 4e-23
Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVL-GMDILCQAKSGMGKTAVFVLATLQQLEPS 444
L+P I + + GF+ PS +Q + IP + DI+ QA++G GKTA F L +Q++EP
Sbjct: 9 LEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPG 68
Query: 445 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 624
L++C TRELA Q+++E + F K G+ +GG PI + LK +VV
Sbjct: 69 LKKPQALILCPTRELAIQVNEEIKSFCK-GRGITTVTLYGGAPIMDQKRALKKGV-DLVV 126
Query: 625 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAX 804
TPGR + +LDE D+ML ++ DV+++ + P + V+MFSA
Sbjct: 127 ATPGRCIHFIEDGKLELDSLEYLVLDEADEML-NMGFVEDVEKVLKASPDDRTVLMFSAT 185
Query: 805 LSKEIRPVCKN 837
+ ++ + ++
Sbjct: 186 MPPRLKKIAES 196
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 110 bits (264), Expect = 5e-23
Identities = 68/190 (35%), Positives = 102/190 (53%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+ ++ ILR+I D FE P+E+Q IP + G DI+ A +G GKT F +Q+
Sbjct: 4 FKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQK 63
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+E + LV+ TRELA Q+ + FS++ +RV+ +GG+ I L+ A
Sbjct: 64 IEKGNG-IRALVLTPTRELAEQVQNSLKEFSRHKQ-LRVAPIYGGVAINPQIRQLERA-- 119
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+VV TPGR+L +LDE D+ML+ + DV+EI P +Q MM
Sbjct: 120 DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLD-MGFIDDVEEIIDECPSDRQTMM 178
Query: 793 FSAXLSKEIR 822
FSA +SK+I+
Sbjct: 179 FSATVSKDIQ 188
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 110 bits (264), Expect = 5e-23
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 2/198 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F +F L PE+L +I + P+ +Q IP A+ G DI+ A++G GKTA F + LQ
Sbjct: 100 FTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQT 159
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L + Y LV+ TRELAFQI + ++ M G+R GGM + + L P
Sbjct: 160 LYTAAQPYYALVLAPTRELAFQIKETFDALGSSM-GLRSVCIIGGMSMMEQARDLMRK-P 217
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIFRN-PPHGKQV 786
H+++ TPGR++ + ++DE D+M++ LD + + +I + P H +
Sbjct: 218 HVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMID-LDYAKAIDQILKQIPSHQRIT 276
Query: 787 MMFSAXLSKEIRPVCKNL 840
+++A +S+EI ++L
Sbjct: 277 YLYTATMSREIEKFKRSL 294
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 109 bits (263), Expect = 7e-23
Identities = 63/194 (32%), Positives = 99/194 (51%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F F L +IL+++ G+ PS VQ E IP+ + G +++ ++K+G GKTA F + +
Sbjct: 5 FEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCEN 64
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ +++ L++ TRELA Q+ E + + VR S FG I+ LK
Sbjct: 65 INVDYNNIQALIVVPTRELALQVKDEISDIGR-LKKVRCSAIFGKQSIKDQIAELKQRV- 122
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HIVV TPGRIL ++DE DKM +++I N P K V +
Sbjct: 123 HIVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNK-GFVEQMEKILLNLPKEKIVSL 181
Query: 793 FSAXLSKEIRPVCK 834
FSA + +EI+ +C+
Sbjct: 182 FSATIDEEIKYICE 195
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 109 bits (263), Expect = 7e-23
Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 8/209 (3%)
Frame = +1
Query: 235 SIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFV 414
+I S+ F L E++ A+ G+E+P+ +Q IP+A+ G D+L A++G GKTA F+
Sbjct: 25 TIMSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFM 84
Query: 415 LATLQQLE--------PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 570
L +L++L+ P+ V +LV+ TRELA QI + + + K + +R +V FGGM
Sbjct: 85 LPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLP-LRHTVLFGGM 143
Query: 571 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQ 750
+ K L+ C IVV T GR+L +LDE D+ML+ + D++
Sbjct: 144 NMDKQTADLRAGC-EIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLD-MGFIDDIR 201
Query: 751 EIFRNPPHGKQVMMFSAXLSKEIRPVCKN 837
+I + P +Q ++FSA S IR + ++
Sbjct: 202 KIMQMLPKQRQTLLFSATFSAPIRKLAQD 230
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 109 bits (263), Expect = 7e-23
Identities = 69/200 (34%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
S+ F D L + RA+ GF+ PS VQ C+P G D++ QAKSG GKT FV+
Sbjct: 36 SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIA 95
Query: 424 LQQLEPSESHVYVLVMCHTRELAFQISKEY-ERFSKY-------MSGVRVSVFFGGMPIQ 579
L++++ L + TRE A Q + + E K+ G+ + GG+P++
Sbjct: 96 LERVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGDARGGIETCLLVGGLPVK 155
Query: 580 KDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIF 759
+D L + PH+VVGTPGR ILDE D +L S RDV +
Sbjct: 156 EDRARLASQ-PHVVVGTPGRTRQMLEEGSMACDGARLLILDEADALL-SGTFERDVLFAY 213
Query: 760 RNPPHGKQVMMFSAXLSKEI 819
P KQV FSA SK +
Sbjct: 214 SMLPERKQVCAFSATYSKTL 233
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 109 bits (263), Expect = 7e-23
Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 7/199 (3%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
SS F D L P +L+A+ F+ P+ VQ + IP A+ G D+L +AK+G GKTA +VL
Sbjct: 42 SSSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPI 101
Query: 424 LQ------QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMS-GVRVSVFFGGMPIQK 582
LQ Q+ P +++ L++ TREL Q++KE ERFS + + V+V +
Sbjct: 102 LQAVLKRKQINPGATYISSLILVPTRELTVQVTKEVERFSAFCAKEVQVVGLTDKVSDAV 161
Query: 583 DEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFR 762
+L+++ P IVV TP +LDE D +L S D++++ R
Sbjct: 162 QRSLLQSSSPDIVVSTPSTAWRNVDSGALSLDKLTHLVLDEADLVL-SYGYDEDLEKVAR 220
Query: 763 NPPHGKQVMMFSAXLSKEI 819
P G Q +M SA L+ EI
Sbjct: 221 GLPKGVQTVMTSATLTDEI 239
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 109 bits (262), Expect = 9e-23
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L EIL A+ D G+ +P+ +Q + IP + G D++ A++G GKTA F L L +
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66
Query: 433 LE--------PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
L+ P+ V L+M TRELA QI + ++ KY++ +R +V FGG+ I+
Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLA-LRTAVVFGGINIEPQI 125
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNP 768
L+ A I+V TPGR+L +LDE D+ML+ + D++ +
Sbjct: 126 AALQ-AGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLD-MGFLPDIKRVMALL 183
Query: 769 PHGKQVMMFSAXLSKEIRPVCKNL 840
+Q +MFSA S EIR + +L
Sbjct: 184 SPQRQSLMFSATFSGEIRKLADSL 207
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 109 bits (262), Expect = 9e-23
Identities = 62/193 (32%), Positives = 107/193 (55%), Gaps = 3/193 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L I+RAI + G+EHP+ +Q + IP+ + G D+L A++G GKTA F L LQ+
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 433 LEPSESHVYV---LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L S + + L++ TRELA Q+++ ++ + KY+ + ++ GG + + +VL
Sbjct: 353 LAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLR-LTHALLIGGESMAEQRDVLNR 411
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
+++ TPGR+L ++DE D+ML+ + D+++I P +Q
Sbjct: 412 GV-DVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLD-MGFIPDIEKIVALLPAHRQ 469
Query: 784 VMMFSAXLSKEIR 822
+ FSA ++ EIR
Sbjct: 470 TLFFSATMAPEIR 482
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 109 bits (262), Expect = 9e-23
Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
S F L IL+AI D G+ PS +Q + IP + G D++ A++G GKTA F L
Sbjct: 4 SMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPL 63
Query: 424 LQQLEPSE----SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
L+ L E + V LV+ TRELA Q+++ + + +++S ++ +V FGG+ I
Sbjct: 64 LEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLS-LKSTVVFGGVKINPQMM 122
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
L+ I++ TPGR++ +LDE D+ML+ + D+++I P
Sbjct: 123 ALRRGA-DILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLD-MGFIHDIKKILAILP 180
Query: 772 HGKQVMMFSAXLSKEIRPVCKNL 840
+Q ++FSA S EIR + K L
Sbjct: 181 KKRQNLLFSATFSPEIRQLAKGL 203
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 109 bits (261), Expect = 1e-22
Identities = 60/189 (31%), Positives = 101/189 (53%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F ++ L E+ RA+ G+EHP+EVQ E IP A+ D++ ++++G GKTA F + +
Sbjct: 6 FSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEM 65
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+E E+ LV+ TRELA Q+ ++ ++ ++ + +G P + + LK
Sbjct: 66 VEWEENKPQALVLTPTRELAVQVKEDITNIGRF-KRIKAAAIYGKSPFARQKLELKQK-T 123
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HIVVGTPGR+L ++DE D+ML ++ V+ I P + M+
Sbjct: 124 HIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEML-NMGFIDQVEAIIDELPTKRMTML 182
Query: 793 FSAXLSKEI 819
FSA L +++
Sbjct: 183 FSATLPEDV 191
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 109 bits (261), Expect = 1e-22
Identities = 62/192 (32%), Positives = 100/192 (52%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L +L A++ GF +++Q IP + G D+L +A++G GKTA F L L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ S ++V+ TRELA Q+++ E F K M G+RV+ +GG + L+
Sbjct: 77 IDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGA- 135
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+VVGTPGR++ +LDE D+ML ++ D+Q I + P Q+ +
Sbjct: 136 QVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEML-NMGFLEDIQWILDHIPKTAQMCL 194
Query: 793 FSAXLSKEIRPV 828
FSA + IR +
Sbjct: 195 FSATMPPAIRKI 206
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 109 bits (261), Expect = 1e-22
Identities = 57/190 (30%), Positives = 106/190 (55%), Gaps = 1/190 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D + P+I+ A + GF+HP+ +Q + IP+A+ D++ A++G GKTA F + LQ
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L + + V+ TRELA+QIS++ E + GVR + GGM + + + + P
Sbjct: 166 LWDNPKPFFACVLAPTRELAYQISQQVEALGSTI-GVRSATIVGGMDMM-SQSIALSKRP 223
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
H++V TPGR+ + ++DE D++L+ +D + ++ ++ P ++ M
Sbjct: 224 HVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLD-MDFGPIIDKLLQSIPRERRTM 282
Query: 790 MFSAXLSKEI 819
+FSA ++ ++
Sbjct: 283 LFSATMTTKV 292
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 109 bits (261), Expect = 1e-22
Identities = 63/184 (34%), Positives = 92/184 (50%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
L+ ++LR I GFE PS +Q I Q + G D++ Q++SG GKTA F ++ LQ L+
Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV 104
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 627
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 105 RETQALILAPTRELAVQIQKGLLALGDYMN-VQCHACIGGTNVGEDIRKLDYG-QHVVAG 162
Query: 628 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXL 807
TPGR+ +LDE D+ML + + +++R P QV++ SA L
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATL 221
Query: 808 SKEI 819
EI
Sbjct: 222 PHEI 225
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 109 bits (261), Expect = 1e-22
Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+D L +L+AI GF+ P+ +Q CIP +LG DI A +G GKTA F L L++
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279
Query: 433 L--EPSESHV-YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L +P ++ V VLV+ TREL Q+ + +++ + + + GG+ ++ E L+
Sbjct: 280 LIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCN-ITTCLAVGGLDVKSQEAALR- 337
Query: 604 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
A P I++ TPGR++ ILDE D+ML+ ++EI R H +
Sbjct: 338 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEY-FEEQMKEIIRMCSHHR 396
Query: 781 QVMMFSAXLSKEIR 822
Q M+FSA ++ E++
Sbjct: 397 QTMLFSATMTDEVK 410
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 108 bits (260), Expect = 2e-22
Identities = 59/195 (30%), Positives = 107/195 (54%), Gaps = 3/195 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L P++ +AIV+ G+E P+ +Q IP A+ G D+L A++G GKTA F L +
Sbjct: 13 FADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITM 72
Query: 433 LEPSESHVYV---LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L + + LV+C TRELA Q+++ ++ ++K++ + ++ GG+ ++ E+ +
Sbjct: 73 LARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVK-LTKALLIGGVSFKEQEQAIDK 131
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
+++ TPGR+L ++DE D+ML+ + D++ IF P +Q
Sbjct: 132 GV-DVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLD-MGFIPDIERIFGLVPFTRQ 189
Query: 784 VMMFSAXLSKEIRPV 828
+ FSA ++ EI +
Sbjct: 190 TLFFSATMAPEIERI 204
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 108 bits (260), Expect = 2e-22
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 2/196 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAV-LGMDILCQAKSGMGKTAVFVLATLQ 429
F DF L EIL AI G+E P+E+Q +P A+ D++ QA++G GKTA F + L+
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 430 QLE-PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
+++ + V +++ TRELA QI +E + K V+++ +GG ++K + L+
Sbjct: 80 RIDFKANKFVKAIIVTPTRELALQIFEELKSL-KGTKRVKITTLYGGQSLEKQFKDLEKG 138
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
IVVGTPGRI+ +LDE D+ML+ + DV EI + K+
Sbjct: 139 V-DIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLD-MGFLDDVLEIIKRTGENKRT 196
Query: 787 MMFSAXLSKEIRPVCK 834
+FSA + KEI + +
Sbjct: 197 FLFSATMPKEIVDIAR 212
>UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;
n=6; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 48 - Oryza sativa subsp. japonica (Rice)
Length = 811
Score = 108 bits (260), Expect = 2e-22
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + + P ++A+ D G+ + VQ +P + G D+L +AK+G GK+A F+L ++
Sbjct: 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIES 403
Query: 433 -LEPSESH-------VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
L +SH ++ L++C TRELA Q++ E KY G+ V GG + D+
Sbjct: 404 VLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGIGVQSLIGGTRFKLDQ 463
Query: 589 EVLKTACPHIVVGTPGRIL---AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIF 759
L++ I+V TPGR+L +LDE D +L+ L R D+++I
Sbjct: 464 RRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADHLLD-LGFRTDIEKIV 522
Query: 760 RNPPHGKQVMMFSAXLSKEIRPV 828
+ P +Q ++FSA + KE+R V
Sbjct: 523 DSLPRQRQTLLFSATIPKEVRRV 545
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 108 bits (259), Expect = 2e-22
Identities = 60/189 (31%), Positives = 101/189 (53%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
L E+ +A+ D G++ P+ +Q + IP A+ G DIL QA +G GKT F + +++L+ +
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGK 66
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 627
V LV+ TRELA Q+ ++ +KY + VF+GG ++++ ++L+ I++G
Sbjct: 67 PDVKALVLTPTRELAIQVKEQIYMLTKY-KRLSSYVFYGGTSVKQNLDILQNKNVDILIG 125
Query: 628 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXL 807
TPGRI +LDE D+ML+ + D++ I P + MFSA +
Sbjct: 126 TPGRIKDLIDRKALNLSKVEYLVLDEFDQMLD-MGFIEDIEYIISFLPKERTTYMFSATV 184
Query: 808 SKEIRPVCK 834
I + K
Sbjct: 185 PSRIELLAK 193
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 107 bits (258), Expect = 3e-22
Identities = 65/205 (31%), Positives = 100/205 (48%)
Frame = +1
Query: 214 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 393
E+ G V+ + D L E+++AI G+ + VQ IP + D++ +A +G
Sbjct: 2 EINGEQVN-EVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGT 60
Query: 394 GKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMP 573
GKT F + ++ ++P V LV+ TRELA QI E ++ GVR +GG P
Sbjct: 61 GKTFAFGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAP 120
Query: 574 IQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQE 753
I+K LK P IVV TPGR++ +LDE D+ML+ + DV
Sbjct: 121 IEKQITTLKKH-PQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLD-MGFIHDVTR 178
Query: 754 IFRNPPHGKQVMMFSAXLSKEIRPV 828
I K + +FSA +S+E+ +
Sbjct: 179 ILDQIKSRKNLGLFSATISREVMDI 203
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 107 bits (258), Expect = 3e-22
Identities = 61/194 (31%), Positives = 99/194 (51%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + + IL+AI D GF+ P+EVQ + IP + D++ +K+G GKTAVF ++ LQ
Sbjct: 5 FNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQL 64
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
P E+ L++ RELA Q+ + + +KY+ + + +G I + ++L
Sbjct: 65 TNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKH-KTTAIYGQHNINLETQILNKGV- 122
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
IV GTPGR+ +LDE D+ML+ + V I + P + ++
Sbjct: 123 SIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLD-MGFLDQVVRIVKTLPKERITLL 181
Query: 793 FSAXLSKEIRPVCK 834
FSA + EI +CK
Sbjct: 182 FSATMPPEIHNICK 195
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 107 bits (258), Expect = 3e-22
Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + LKP I+ A+ GF P+++Q IP + ++ Q+++G GKT ++L L +
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG--VRVSVFFGGMPIQKDEEVLKTA 606
++P++ V V++ TRELA QI +E + ++ G +R F GG QK + LK
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ 125
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
PH+VVGTPGRI ++DE D ML+ + DV I P Q+
Sbjct: 126 -PHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLD-MGFLADVDYIGSRMPEDLQM 183
Query: 787 MMFSAXLSKEIRPVCK 834
++FSA + ++++P K
Sbjct: 184 LVFSATIPEKLKPFLK 199
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 107 bits (257), Expect = 4e-22
Identities = 54/154 (35%), Positives = 88/154 (57%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D+ LK E+L I + G+E PS +Q E IP A+ G DIL +AK+G GK+ +++ L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ + H+ LV+ TRELA Q+S+ + +K++ GV+V GG + +D+ +
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNL-RDDIMRLDETV 209
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDK 714
H+V+ TPGRIL ++DE K
Sbjct: 210 HVVIATPGRILDLMKKGVAKVDKVQIMVMDEVGK 243
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 107 bits (257), Expect = 4e-22
Identities = 63/194 (32%), Positives = 109/194 (56%), Gaps = 2/194 (1%)
Frame = +1
Query: 265 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPS 444
L++P IL+A+ G+ P+ +Q + IP + G D+L A++G GKTA F + LQ+L +
Sbjct: 8 LIEP-ILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQKLYKT 66
Query: 445 ESH--VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 618
+ + LV+ TRELA QI + +E + +Y +G++ +V FGG+ + + L++ I
Sbjct: 67 DHRKGIKALVLTPTRELAIQIGESFEAYGRY-TGLKHAVIFGGVGQKPQTDALRSGI-QI 124
Query: 619 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFS 798
+V TPGR+L F+LDE D+ML+ + D++ I + P +Q + FS
Sbjct: 125 LVATPGRLLDLISQGFISLSSLDFFVLDEADRMLD-MGFIHDIKRILKLLPARRQTLFFS 183
Query: 799 AXLSKEIRPVCKNL 840
A + EI + ++
Sbjct: 184 ATMPPEIETLANSM 197
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 107 bits (256), Expect = 5e-22
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L E +R+I + G+ P+ +Q IP+ + G DI+ A++G GKTA F+L ++
Sbjct: 26 FEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIEL 85
Query: 433 L----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
L +P V+ LV+ TRELA Q+ + ++KY++ +R FGG+ I+ + L+
Sbjct: 86 LRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLA-LRSDAVFGGVSIRPQVKRLQ 144
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
I+V TPGR+L +LDE D+ML+ + RD++++ P +
Sbjct: 145 GGV-DILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLD-MGFIRDIKKVIEYLPKNR 202
Query: 781 QVMMFSAXLSKEIRPVCKNL 840
Q MMFSA S I+ + L
Sbjct: 203 QNMMFSATFSTPIKKLALGL 222
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 107 bits (256), Expect = 5e-22
Identities = 62/205 (30%), Positives = 102/205 (49%)
Frame = +1
Query: 205 PKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAK 384
P K V + + F L + A+ + G+ P+ +Q + +P + G D+ A+
Sbjct: 119 PIKPVTPVEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQ 178
Query: 385 SGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFG 564
+G GKTA F L L +L E + LV+ TRELA Q+ + ++++SKY + + +V +G
Sbjct: 179 TGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKY-TDLTATVVYG 237
Query: 565 GMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRD 744
G+ K E L+ +V TPGR+L +LDE D+ML+ + D
Sbjct: 238 GVGYGKQREDLQRGV-DVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLD-MGFLPD 295
Query: 745 VQEIFRNPPHGKQVMMFSAXLSKEI 819
V+ I + P +Q + FSA L E+
Sbjct: 296 VKRIVQQCPQARQTLFFSATLPPEL 320
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 107 bits (256), Expect = 5e-22
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 1/196 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM-DILCQAKSGMGKTAVFVLATLQ 429
F++ L EIL A+ GF P+ +Q + IP + G DI+ QA++G GKTA F + L+
Sbjct: 4 FKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
Query: 430 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
++ S + L++ TRELA Q+++E + K + V +GG I + L+
Sbjct: 64 TIDESSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSIDRQIRELRRGV 122
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
IVVGTPGRIL +LDE D+ML ++ DV+EI ++ K+++
Sbjct: 123 -QIVVGTPGRILDHISRRTIKLENVSYVVLDEADEML-NMGFIDDVEEILKSVSTEKRML 180
Query: 790 MFSAXLSKEIRPVCKN 837
+FSA L I + KN
Sbjct: 181 LFSATLPDSIMKLAKN 196
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 106 bits (255), Expect = 6e-22
Identities = 65/189 (34%), Positives = 97/189 (51%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L EI++A+ + P+ +Q + IP A+ G DI+ ++K+G GKTA F + +
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ E+ LV+ TRELA+Q+ E + M V+V V FGG P K LK
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVGR-MKRVKVPVVFGGFPFDKQALTLKQK-S 123
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
HIVVGTPGR+L I+DE D ML+ + DV+ I P +M+
Sbjct: 124 HIVVGTPGRVLDHCETGTLKCSNVKYVIIDEADLMLD-MGFLDDVKRILSYLPENITIML 182
Query: 793 FSAXLSKEI 819
FSA + + +
Sbjct: 183 FSATMGEAL 191
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 106 bits (255), Expect = 6e-22
Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 5/210 (2%)
Frame = +1
Query: 226 SYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 405
+++S+H S F L P IL+A+ + P +Q + IP + G DIL A++G GKTA
Sbjct: 3 THLSLHMS-FATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTA 61
Query: 406 VFVLATLQQLEP----SESHVYVLVMCHTRELAFQISKEYERFSKYM-SGVRVSVFFGGM 570
FVL LQ L+ H+ LV+ TRELA Q+ + ++ FS + + ++ +GG+
Sbjct: 62 SFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGV 121
Query: 571 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQ 750
I + ++++ I++ TPGR+L +LDE DKML +L + ++
Sbjct: 122 SI--NPQMIQLQGVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKML-NLGFKEEMA 178
Query: 751 EIFRNPPHGKQVMMFSAXLSKEIRPVCKNL 840
IF+ P +Q ++FSA L K++ + + L
Sbjct: 179 NIFKLLPQKRQNLLFSATLGKDVDTITEFL 208
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 106 bits (255), Expect = 6e-22
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 6/202 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL-- 426
F D L I +AI + F P+ VQ + IP + +++ A++G GKTA F L +
Sbjct: 3 FSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIINL 62
Query: 427 ----QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 594
Q E E + LV+ TRELA QI + ++ +SKY S +R + FGG+ ++ +E+
Sbjct: 63 LFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKY-SNLRSTAVFGGVSLEPQKEI 121
Query: 595 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPH 774
L I+V TPGR++ F+LDE D ML+ + D+++I + P
Sbjct: 122 LAKGV-DILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLD-MGFINDIKKIEKLCPR 179
Query: 775 GKQVMMFSAXLSKEIRPVCKNL 840
KQ ++FSA + ++I + K++
Sbjct: 180 KKQTLLFSATIPEKIDELSKSI 201
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 106 bits (254), Expect = 9e-22
Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L P + RA+ D GF PS +Q IP A+ G D++ QA++G GKTA F + L+Q
Sbjct: 46 FDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILEQ 105
Query: 433 LEPSES--HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
L+ E +V+ TRELA Q++ E ER ++ + ++V GG + + L+
Sbjct: 106 LDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVP-TEIAVLSGGKNMNRQLRQLENG 164
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
+VVGTPGR+ +LDE D+ML+ + R ++ I R P +Q
Sbjct: 165 -TQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLD-IGFRPQIERIMRKCPRNRQT 222
Query: 787 MMFSAXLSKEIRPVCKN 837
++ SA L +R + ++
Sbjct: 223 LLLSATLPPVVRRLAES 239
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 105 bits (253), Expect = 1e-21
Identities = 56/189 (29%), Positives = 101/189 (53%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
+ EI + P+ VQ + IP + D++ QA++G GKT F+L L+++ +
Sbjct: 10 ISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILERVNVEK 69
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 627
+ L++ TRELA QI+ E ++ ++ + G+ + +GG +++ LK + HI++G
Sbjct: 70 PTIQALIITPTRELAIQITAETKKLAE-VKGINILAAYGGQDVEQQLRKLKGSI-HIIIG 127
Query: 628 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXL 807
TPGR+L +LDE D+ML + RDV++I + P +Q M FSA +
Sbjct: 128 TPGRLLDHLRRKTINLGKLSMLVLDEADQMLH-MGFLRDVEDIMTHIPKRRQNMFFSATM 186
Query: 808 SKEIRPVCK 834
++R + +
Sbjct: 187 PNQVRTLAE 195
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 105 bits (253), Expect = 1e-21
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 9/203 (4%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF L P ++ AI D GF + + +Q + + + G D + +A++G GKTA F+++ + Q
Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70
Query: 433 L----EPSESHV---YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
L P E ++ L++ TREL QI+K+ +KY +G+ V F GGM K +
Sbjct: 71 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKY-TGLNVMTFVGGMDFDKQLK 129
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
L+ I+V TPGR+L +LDE D+ML+ + V++I R P
Sbjct: 130 QLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLD-MGFIPQVRQIIRQTP 188
Query: 772 H--GKQVMMFSAXLSKEIRPVCK 834
H +Q ++FSA + ++ + K
Sbjct: 189 HKGERQTLLFSATFTDDVMNLAK 211
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 105 bits (252), Expect = 1e-21
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + KP ++ A+ + F P+ +Q + P G+ ++ Q+++G GKT ++L TL +
Sbjct: 6 FTQYDFKPFLIDAVRELRFTEPTGIQQKIFPVVKKGVSVIGQSQTGSGKTHAYLLPTLNR 65
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG---VRVSVFFGGMPIQKDEEVLKT 603
+ P V +++ TRELA QI +E + +K+ + + GG Q+ E LK
Sbjct: 66 INPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSIEKLKK 125
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
PHIVVGTPGRI I+DE D ML+ + DV +I P Q
Sbjct: 126 Q-PHIVVGTPGRIKDLVEEQALFVHKANTIIVDEADLMLD-MGFIHDVDKIAARMPKNLQ 183
Query: 784 VMMFSAXLSKEIRPVCK 834
+++FSA + ++++P K
Sbjct: 184 MLVFSATIPQKLKPFLK 200
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 105 bits (252), Expect = 1e-21
Identities = 68/201 (33%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
+ F D L I+ + + G++ P +Q +CIP + G D+L A +G GKTA F+L L
Sbjct: 6 NSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLL 65
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG-VRVSVFFGGMPIQKDEEVLKT 603
Q ++ + V L++ TRELA QI F K +S + ++V +GG + LK
Sbjct: 66 QNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQFNDLKK 125
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
PHI++GTPGR+L I+DE D+ML + D++ I R P +Q
Sbjct: 126 N-PHIIIGTPGRLL-DHLSRGLDISKLKTLIIDEADEMLR-MGFIEDIEHIIRYVPTHRQ 182
Query: 784 VMMFSAXLSKEIRPVC-KNLC 843
+FSA L IR + K +C
Sbjct: 183 TALFSATLPVSIRKLSYKFMC 203
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 105 bits (252), Expect = 1e-21
Identities = 62/161 (38%), Positives = 86/161 (53%)
Frame = +1
Query: 340 IPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYER 519
IP A+ G D L QAK+G GKTA F L L L+ E L++ TRELA QI +
Sbjct: 3 IPVALQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRD 59
Query: 520 FSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFIL 699
F++Y++ VR F+GG + D +VL+ +V+GTPGRI F+L
Sbjct: 60 FARYLN-VRTFAFYGGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVL 118
Query: 700 DECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIR 822
DE D ML+ ++ + D+ I+ P KQV SA KE+R
Sbjct: 119 DEVDVMLD-MNFKEDIDFIYSQLPEEKQVFFVSATFPKEVR 158
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 105 bits (252), Expect = 1e-21
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
Frame = +1
Query: 214 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 393
+VKGS V S G LK E+L + GF+ + VQ IP + D++ +AK+G
Sbjct: 15 DVKGSGVLFSSLG-----LKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGT 69
Query: 394 GKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGV--RVSVFFGG 567
GKT F++ LQ + P++ H+ LV+ HTRELA Q +K + SK M V R+ GG
Sbjct: 70 GKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGG 129
Query: 568 MPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDV 747
+ I +D E + P +V+ TPGR+ +LDE D +L +R
Sbjct: 130 VSIAEDRERAREK-PLVVLATPGRLQQLIDEEILNFRDCSIVVLDEADMLLSQNFIRSIE 188
Query: 748 QEIFRNPPHGKQVMMFSAXLSKEIRPVC 831
+ +Q + FSA S ++ C
Sbjct: 189 NCLAACSNKRRQTLFFSATFSNSLKEFC 216
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 105 bits (252), Expect = 1e-21
Identities = 59/194 (30%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L +L+ + G+ PS +Q IP A+LG DI+ A +G GKTA F++ +++
Sbjct: 233 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 292
Query: 433 L--EPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L +P++ + V+V+ TRELA Q++ ++ ++++SG+ + GG+ +++ E++LK+
Sbjct: 293 LLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKS 352
Query: 604 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
P IV+ TPGR + ++DE D+MLE + ++ EI P +
Sbjct: 353 R-PDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEE-GFQDELNEIMGLLPSNR 410
Query: 781 QVMMFSAXLSKEIR 822
Q ++FSA ++ +I+
Sbjct: 411 QNLLFSATMNSKIK 424
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 105 bits (252), Expect = 1e-21
Identities = 59/191 (30%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+D + + A G+ P+++Q E IP A+ G DI+ A++G GKT F L L
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L + ++ LV+ TRELAFQIS+++E + GV+ +V GG+ L P
Sbjct: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
HI++ TPGR++ + ++DE D++L ++D +V +I + P ++
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTF 202
Query: 790 MFSAXLSKEIR 822
+FSA ++K+++
Sbjct: 203 LFSATMTKKVQ 213
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 105 bits (251), Expect = 2e-21
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF L P+I +AI G+ P+ +Q + IP + G+D++ A++G GKTA F L L +
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 433 L--------EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
L P+ V L++ TRELA Q++ ++K+ + +R +V +GG+ I
Sbjct: 82 LMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKF-TPLRSTVVYGGVDINPQI 140
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNP 768
+ L+ +V+ TPGR+L +LDE D+ML+ + D+Q I
Sbjct: 141 QTLRRGV-ELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLD-MGFLPDLQRIINLL 198
Query: 769 PHGKQVMMFSAXLSKEIRPVCKN 837
P +Q ++FSA S EI+ + K+
Sbjct: 199 PKTRQNLLFSATFSPEIQKLAKS 221
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 105 bits (251), Expect = 2e-21
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L +L+A+ GF P+ +Q + IP A+ G DIL A +G GKTA F+L L++
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 433 LEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L +S + VL++ TRELA Q E +++ S + + GG+ K +EV
Sbjct: 252 LLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQF-SNITSCLIVGGLS-NKAQEVELR 309
Query: 604 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
P +V+ TPGR++ ILDE D++L+ + + ++ +I + P +
Sbjct: 310 KSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLD-MGFKDEINKIVESCPTNR 368
Query: 781 QVMMFSAXLSKEIRPVCK 834
Q M+FSA L+ E++ + K
Sbjct: 369 QTMLFSATLNDEVKTLAK 386
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 104 bits (250), Expect = 3e-21
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+D L +L+AI F P+ +Q CIP +LG DI A +G GKTA F+L L++
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 433 L--EPSESHV-YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L +P E+ V VLV+ TREL Q+ + +++ + V + GG+ ++ E L++
Sbjct: 243 LIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQF-TEVTTCLAVGGLDVKTQEAALRS 301
Query: 604 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
P +++ TPGR++ ILDE D+ML+ ++EI R H +
Sbjct: 302 G-PDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEY-FEEQMKEIIRLCSHQR 359
Query: 781 QVMMFSAXLSKEIR 822
Q ++FSA +S+E++
Sbjct: 360 QTLLFSATMSEEVK 373
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 104 bits (250), Expect = 3e-21
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 4/194 (2%)
Frame = +1
Query: 265 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--- 435
++KP +L AI D G+E P+ +Q IP + D+ A++G GKTA F L LQ+L
Sbjct: 8 VIKP-LLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQRLRKT 66
Query: 436 -EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+ + + LV+ TREL+ QI ++ + ++K M G+ ++V GG ++ +++LK
Sbjct: 67 SDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNM-GINIAVLVGGKDLESQQKILKEGV- 124
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
IV+ TPGR+L F+LDE D+ML+ + ++++ I P Q ++
Sbjct: 125 DIVIATPGRVL-EHVDKGLSLSHVEIFVLDEADRMLD-MGFMKEIRRIHPILPKRHQTLL 182
Query: 793 FSAXLSKEIRPVCK 834
FSA S ++R + K
Sbjct: 183 FSATFSDKVRKLSK 196
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 104 bits (250), Expect = 3e-21
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L P I++ I + PS +Q + +P A+ G D+L A++G GKTA F + LQ
Sbjct: 120 FNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMLQH 179
Query: 433 --LEP---SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
++P LV+ TRELA QI KE + FS+ + ++ + GG I+K L
Sbjct: 180 CLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSEL 239
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
+ A I V TPGR + +LDE D+ML+ + ++EI R+ P
Sbjct: 240 R-AGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLD-MGFEPQIREIMRSLPEK 297
Query: 778 KQVMMFSAXLSKEIRPVCK 834
Q ++FSA + EI + K
Sbjct: 298 HQTLLFSATMPVEIEALAK 316
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 104 bits (249), Expect = 3e-21
Identities = 62/194 (31%), Positives = 97/194 (50%)
Frame = +1
Query: 238 IHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL 417
+ S F + L IL + G+E PS +Q + IP + G D+L QA++G GKTA F L
Sbjct: 6 VASPTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFAL 65
Query: 418 ATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
L +L+ VLV+ TRELA Q++ + ++ + + G+ V GG ++ L
Sbjct: 66 PLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGL 125
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
+ ++VGTPGR++ +LDE D+ML + DV+ + + P
Sbjct: 126 RRGA-QVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLR-MGFIDDVKRVVSDTPKD 183
Query: 778 KQVMMFSAXLSKEI 819
Q + FSA L EI
Sbjct: 184 AQRVFFSATLPDEI 197
>UniRef50_A5B712 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 304
Score = 104 bits (249), Expect = 3e-21
Identities = 51/75 (68%), Positives = 54/75 (72%)
Frame = +1
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
PHIVVGTPGRILA ILDECD+M ESLDMRRDVQEIF+ P+ KQVM
Sbjct: 200 PHIVVGTPGRILALAGDKDLALKNMRNLILDECDEMFESLDMRRDVQEIFKTAPYDKQVM 259
Query: 790 MFSAXLSKEIRPVCK 834
MFSA LSK IRPVCK
Sbjct: 260 MFSATLSKGIRPVCK 274
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 104 bits (249), Expect = 3e-21
Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 3/195 (1%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
+GF + L ++ G + P+ VQ CIP + G D L AK+G GKTA FVL L
Sbjct: 2 AGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPIL 61
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
Q+L ++ LV+ TRELA+QI++++ K + G++ + GGM + L
Sbjct: 62 QKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL-GLKDCIIVGGMDMVAQALELSRK 120
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLES--LDMRRDVQEIFRNPPHG 777
PH+V+ TPGR+ F ++DE D++LE D D++ I P
Sbjct: 121 -PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPAR 179
Query: 778 KQVMMFSAXLSKEIR 822
+Q ++FSA L+ +R
Sbjct: 180 RQTLLFSATLTDTLR 194
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 103 bits (248), Expect = 5e-21
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 1/209 (0%)
Frame = +1
Query: 214 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 393
E + S S S GF+ L + L ++ G+ P+ +Q + IP + G DI+ A++G
Sbjct: 2 EEQQSKKSKSSGGFQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGS 61
Query: 394 GKTAVFVLATLQQLEP-SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 570
GKTA +++ + +LE S V L++C TRELA Q K + K ++ ++ S+ GG
Sbjct: 62 GKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGK-LTNLKASLIIGGS 120
Query: 571 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQ 750
+ + L + P I+V TPGR+ DE D M ES V
Sbjct: 121 KLSDQFDNLSSG-PDIIVATPGRLTFILEGANISLNRVEMVCFDEADLMFES-GFSEQVS 178
Query: 751 EIFRNPPHGKQVMMFSAXLSKEIRPVCKN 837
+I R P +Q+++FSA L + + KN
Sbjct: 179 DIMRMLPPTRQILLFSATLPRNLAEFLKN 207
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 103 bits (248), Expect = 5e-21
Identities = 58/196 (29%), Positives = 96/196 (48%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L P +L + + G++ + VQ +P + D + +A +G GKT F L L +
Sbjct: 23 FNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADTGSGKTTAFALTLLAK 82
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
LE LV+C TRELA Q++ E + +K M +++ GG P + L+
Sbjct: 83 LEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGGEPSRIQTNSLEHGA- 141
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
H++VGTPGR+L +LDE D+MLE + + + I ++ P +Q ++
Sbjct: 142 HVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLE-MGFQDSLNAIVKHIPKTRQTLL 200
Query: 793 FSAXLSKEIRPVCKNL 840
FSA K I + + +
Sbjct: 201 FSATYPKNIAALAEQV 216
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 103 bits (248), Expect = 5e-21
Identities = 64/196 (32%), Positives = 102/196 (52%)
Frame = +1
Query: 241 HSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLA 420
+S G DFL E L+++ G+E + +Q IP + G D++ A++G GKTA F L
Sbjct: 12 NSLGLPDFL--QENLQSL---GYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALP 66
Query: 421 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
L ++ LV+C TRELA Q+++ + + + M G+R+ FGG +++ + L+
Sbjct: 67 ILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLR 126
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
HIVV TPGR+L +LDE D+ML + DV I P +
Sbjct: 127 EG-THIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLR-MGFIDDVDTILAKTPKER 184
Query: 781 QVMMFSAXLSKEIRPV 828
+V +FSA + K +R +
Sbjct: 185 KVALFSATMPKRVRDI 200
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 103 bits (248), Expect = 5e-21
Identities = 50/189 (26%), Positives = 95/189 (50%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L +L + F P+++Q IP A+ MD++ Q+KSG GKT ++V+A +Q
Sbjct: 27 FEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQS 86
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
P+ + + +++ TRELA Q+ + K + S F GG + KD + + +
Sbjct: 87 FNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNES-- 144
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+++GTPGR+L +LDE D++ ++ ++ V ++ P +Q++
Sbjct: 145 RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIA 204
Query: 793 FSAXLSKEI 819
SA + +
Sbjct: 205 CSATYDQNL 213
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 103 bits (248), Expect = 5e-21
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 8/202 (3%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF L E++ AI D GF + + +Q + + + G D + +A++G GKTA F+++ + Q
Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70
Query: 433 LE----PSESHV---YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
L+ P E ++ L++ TREL QI+K+ +KY +G+ V F GGM K +
Sbjct: 71 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKY-TGLNVMSFVGGMDFDKQLK 129
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
L+ I+V TPGR+L +LDE D+ML+ + + Q I + PP
Sbjct: 130 ALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPP 189
Query: 772 HG-KQVMMFSAXLSKEIRPVCK 834
+Q ++FSA + ++ + K
Sbjct: 190 KSERQTLLFSATFTDDVMNLAK 211
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 103 bits (247), Expect = 6e-21
Identities = 67/195 (34%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F F P+I I D G+ P+ +Q + IP A+ G D++ A++G GKTA FVL LQ+
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQR 62
Query: 433 L-EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
L V +++ TRELA QI E KY +G+R +GG+ Q + L+
Sbjct: 63 LMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKY-TGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
I V PGR+L ILDE D+M + + DV+ I R P +Q M
Sbjct: 122 -EIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFD-MGFLPDVRRILRLAPAQRQTM 179
Query: 790 MFSAXLSKEIRPVCK 834
+FSA + IR + +
Sbjct: 180 LFSATMPDAIRALAR 194
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 103 bits (247), Expect = 6e-21
Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 5/201 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF L IL A+ + ++ P+++Q IP + G DIL A++G GKTA F L L++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 433 LEPSESH-----VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
L E + VLV+ TRELA Q+++ + ++K + + V FGG+ + L
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPV-FGGVSSYPQIQAL 121
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
K+ IVV TPGR+L + DE D+M + + D+++I + P
Sbjct: 122 KSGI-DIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFD-MGFIHDIKQIVKMLPEK 179
Query: 778 KQVMMFSAXLSKEIRPVCKNL 840
+Q ++FSA E+ +C ++
Sbjct: 180 RQNLLFSATYPSEVMSLCNSM 200
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 103 bits (247), Expect = 6e-21
Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 1/202 (0%)
Frame = +1
Query: 232 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG-MDILCQAKSGMGKTAV 408
+ + F + L IL AI + GFE P+++Q + IP + +I+ QA++G GKTA
Sbjct: 1 MEVEYMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTAS 60
Query: 409 FVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
F + ++ + + + +++ TRELA Q++ E E K ++++ +GG I
Sbjct: 61 FAIPLIELVNENNG-IEAIILTPTRELAIQVADEIESL-KGNKNLKIAKIYGGKAIYPQI 118
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNP 768
+ LK A +IVVGTPGRIL FILDE D+ML ++ +DV++I
Sbjct: 119 KALKNA--NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEML-NMGFIKDVEKILNAC 175
Query: 769 PHGKQVMMFSAXLSKEIRPVCK 834
K++++FSA + +EI + K
Sbjct: 176 NKDKRILLFSATMPREILNLAK 197
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 103 bits (247), Expect = 6e-21
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 4/204 (1%)
Frame = +1
Query: 220 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 399
K + HSS F+ L IL+ + + GFE P+++Q + IP A+LG DI+ A +G GK
Sbjct: 251 KSMMTTTHSS-FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGK 309
Query: 400 TAVFVLATLQQL--EPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 570
TA F++ L++L P + VL++C TRELA Q + + + + + V + GG+
Sbjct: 310 TAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASF-TDIMVCLCIGGL 368
Query: 571 PIQKDEEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDV 747
++ E+ L+ P IV+ TPGR + ++DE D+MLE ++
Sbjct: 369 SLKLQEQELRKR-PDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLED-GFADEL 426
Query: 748 QEIFRNPPHGKQVMMFSAXLSKEI 819
EI + P +Q M+FSA ++ ++
Sbjct: 427 NEIIQACPKSRQTMLFSATMTDKV 450
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 103 bits (246), Expect = 8e-21
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 3/193 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L E+L+A+ + G+E P+ VQ IP ++ D++ A++G GKTA FVL +
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMIDI 62
Query: 433 LEPSESHVYV---LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L + L++ TRELA Q+++ +E++ KY + +S+ GG+P+ + + L+
Sbjct: 63 LAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHK-LSMSLLIGGVPMAEQQAALEK 121
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
+++ TPGR+L ++DE D+ML+ + D++ I P +Q
Sbjct: 122 GV-DVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLD-MGFIPDIETICTKLPTSRQ 179
Query: 784 VMMFSAXLSKEIR 822
++FSA + I+
Sbjct: 180 TLLFSATMPPAIK 192
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 103 bits (246), Expect = 8e-21
Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 5/204 (2%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
+ F D L P +LRA+ + G+ P+ +Q + IP + G D+L A++G GKTA F L
Sbjct: 6 AQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPL 65
Query: 424 LQQLEPS-----ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
L +L + ++ VLV+ TREL QI+ +E FS++ VRV+ FGG+
Sbjct: 66 LHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQP-VRVTTIFGGVSQVHQV 124
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNP 768
+ L+ I+V PGR+L +LDE D+ML+ + + ++ I
Sbjct: 125 KALEEGV-DIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLD-MGFAKPIERIVATL 182
Query: 769 PHGKQVMMFSAXLSKEIRPVCKNL 840
P + ++FSA + K I + ++L
Sbjct: 183 PEDRHTVLFSATMPKSIAALVESL 206
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 103 bits (246), Expect = 8e-21
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 1/195 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D + EIL +I + G++ P+E+Q E +P A L DI+ +++G GKTA F++ LQ
Sbjct: 158 FEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQD 217
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L+ ++ Y LV+ TREL QIS+ ++ + + + +GG+ I L P
Sbjct: 218 LKVNKQSFYALVISPTRELCIQISQNFQALGMNLL-INICTIYGGVDIVTQSLNLAKK-P 275
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
+++V TPGRIL + + DE DK+L S D + ++ P +
Sbjct: 276 NVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLL-SQDFESSINKLLLILPPNRITF 334
Query: 790 MFSAXLSKEIRPVCK 834
+FSA ++K + + K
Sbjct: 335 LFSATMTKNVAKLKK 349
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 102 bits (245), Expect = 1e-20
Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D + IL A+ G+ HP+ +Q E IP A+ G D+L A++G GKTA FV+ L +
Sbjct: 46 FTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDR 105
Query: 433 LEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L + S L++ TRELA Q+ +SK M G+ GG P LK
Sbjct: 106 LSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITALKK 165
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
++V TPGR+L +LDE D+ML+ + D+ +I R P +Q
Sbjct: 166 GV-QVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLD-MGFADDISDILRAAPIDRQ 223
Query: 784 VMMFSA 801
+M SA
Sbjct: 224 TIMCSA 229
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 102 bits (245), Expect = 1e-20
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L P +L+A+ + GF P+ +Q + IP A+ G D++ A +G GKTA F+L L Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 433 L-EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
L + LV+ TRELA QI ++ + + + + + FGG+ I+ E +
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVH-TPISAAAVFGGVSIRPQEHAFRRGV 121
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
+++GTPGR+L +LDE D+ML+ + D++ I ++ P +Q +
Sbjct: 122 D-VLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLD-MGFLPDIRRILKHIPARRQTL 179
Query: 790 MFSAXLSKEIRPVCKNL 840
FSA + I + + +
Sbjct: 180 FFSATMPAPIGVLAREM 196
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 102 bits (245), Expect = 1e-20
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM-DILCQAKSGMGKTAVFVLATLQ 429
F D L +L+++ + PSE+Q + IP + +++ A++G GKTA F L LQ
Sbjct: 3 FSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVLQ 62
Query: 430 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
Q+ PS VLV+ TREL Q++K+ FS+Y+ + +GG I++ + L+T
Sbjct: 63 QINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP- 121
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
HI+V TPGR+L ILDE D+ML ++ D+ +I + + +
Sbjct: 122 KHILVATPGRLLDLIARKAVNLSNLKYLILDEADEML-NMGFLPDIDKIMKIAKPTARKL 180
Query: 790 MFSAXLSKEIRPVCKNLCXT 849
+F++ L E++ + + T
Sbjct: 181 LFTSTLGSELKLIIREYLGT 200
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 102 bits (245), Expect = 1e-20
Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L + RAI + G+ HP+ +Q + IP ++G D+L A++G GKTA F L +
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 433 LEPSESHVYV---LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L + + L++ TRELA Q+++ + ++ +Y+ + ++ GG + +VL
Sbjct: 285 LSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLK-LNHALLIGGESMNDQRDVLSK 343
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
+++ TPGR++ ++DE D+ML+ + DV+ I PH +Q
Sbjct: 344 GV-DVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLD-MGFIPDVERIVSLLPHNRQ 401
Query: 784 VMMFSAXLSKEIR 822
+ FSA ++ EIR
Sbjct: 402 TLFFSATMAPEIR 414
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 102 bits (245), Expect = 1e-20
Identities = 56/191 (29%), Positives = 99/191 (51%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F F L+ ++ A+ D FE P+E+Q+ IP+ + +++ Q+++G GK+ F+L +Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ +V+ TRELA Q+ S++ +GV V VF GG I+KD + A P
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRC-NAQP 124
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+++GTP RI ++DE D M++ L + DV I + +
Sbjct: 125 QLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMID-LGLIEDVDYIAARLEDNANIAV 183
Query: 793 FSAXLSKEIRP 825
FSA + ++++P
Sbjct: 184 FSATIPQQLQP 194
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 102 bits (245), Expect = 1e-20
Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
S F F L PE+L+A+ G+ P+ +Q E IP A+ D+L A +G GKTA F+L L
Sbjct: 4 SQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPAL 63
Query: 427 QQL----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 594
Q L +LV+ TRELA Q++++ E +++ + + ++ GG+ Q +V
Sbjct: 64 QHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQF-THLNIATITGGVAYQNHGDV 122
Query: 595 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPH 774
T +VV TPGR+L I DE D+ML+ + +D ++I
Sbjct: 123 FNTN-QDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQ-MGFGQDAEKIAAETRW 180
Query: 775 GKQVMMFSAXLSKEI 819
KQ ++FSA L E+
Sbjct: 181 RKQTLLFSATLEGEL 195
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 102 bits (244), Expect = 1e-20
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVL-GMDILCQAKSGMGKTAVFVLATLQQLEPS 444
L +L + D GFE+P+E+Q + IP + D + A++G GKTA F L L ++ +
Sbjct: 20 LSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLDLIDVN 79
Query: 445 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 624
V L++ TRELA QI + E+ SK++ + V FGG I ++ I+V
Sbjct: 80 SREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGA-QIIV 138
Query: 625 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAX 804
TPGR++ +LDE D+ML ++ + D+ I G+ + +FSA
Sbjct: 139 ATPGRLMDLMKRREVKLDALKYMVLDEADEML-NMGFKEDIDFILSKSDTGRNIWLFSAT 197
Query: 805 LSKEIRPV 828
+++EI+ +
Sbjct: 198 MAREIKRI 205
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 102 bits (244), Expect = 1e-20
Identities = 59/194 (30%), Positives = 95/194 (48%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L P +L A+ G+E PS +Q + IP + G +L A++G GKTA F L L +
Sbjct: 26 FAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLSR 85
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ + + +LV+ TRELA Q+++ + ++ V +GG LK
Sbjct: 86 IDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA- 144
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
++VGTPGR+L +LDE D+ML + DV+ I P Q +
Sbjct: 145 QVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLR-MGFIDDVEAILAKTPDTCQRAL 203
Query: 793 FSAXLSKEIRPVCK 834
FSA + +I+ V +
Sbjct: 204 FSATMPPQIKKVAQ 217
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 102 bits (244), Expect = 1e-20
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 2/194 (1%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
S GF L PE+ RAI GF P+ +Q + IPQ + G DI+ +K+G GKTA F++
Sbjct: 9 SGGFESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPL 68
Query: 424 LQQLEPSESHVYV--LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
+ +L+ + V + L++ TRELA QI+ + K+ S ++ S+ GG + E L
Sbjct: 69 INKLQNHSTVVGIRGLILLPTRELALQIASVLKALLKF-SDIQYSIMVGGHGFEGQFESL 127
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
+ P I++ TPGR+L I DE D + E + + +++I + P
Sbjct: 128 -ASNPDILICTPGRVLQHLLEDRLKLSRVQMVIYDEADFLFE-MGLADQLKQILSHLPSQ 185
Query: 778 KQVMMFSAXLSKEI 819
KQ +MFSA + +++
Sbjct: 186 KQSLMFSATIPEQL 199
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 101 bits (243), Expect = 2e-20
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Frame = +1
Query: 274 PEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL-----E 438
PE+++A+ +CG+E + +Q + IP A G DI A++G GKTA F L +QQL
Sbjct: 10 PEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQQLLESGKS 69
Query: 439 PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 618
S L+ TRELA QI+ + ++KY + + V+ FGG + E +L+ I
Sbjct: 70 ASRKTARALIFAPTRELAEQIADNIKAYTKY-TNLSVAAIFGGRKMSSQERMLENGV-DI 127
Query: 619 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFS 798
+V TPGR+ + DE D++L+ + V++I + Q+MMFS
Sbjct: 128 LVATPGRLEEHIESGNVSVANIEFLVFDEADRILD-MGFINAVRKIMLDVETNPQIMMFS 186
Query: 799 AXLSKEIRPVCKNL 840
A S ++ + K++
Sbjct: 187 ATTSSQLNELSKDI 200
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 101 bits (243), Expect = 2e-20
Identities = 52/192 (27%), Positives = 99/192 (51%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + + +A+ + F + +Q IP+ + G D++ QA++G GKT F + +++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+EP L++C TREL Q+ +E ++ ++ +R++V +GG K L+ A P
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALE-AKP 123
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
H+++ TPGR + LDE D+ML+ + + ++ I + P +Q ++
Sbjct: 124 HLIIATPGRAIDHLERGKIDLSALKILTLDEADEMLK-MGFQEALETILKKIPEERQTVL 182
Query: 793 FSAXLSKEIRPV 828
FSA L I+ +
Sbjct: 183 FSATLPPFIKKI 194
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 101 bits (243), Expect = 2e-20
Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 5/204 (2%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
S GF LL P LRAI D G+ P+ +Q + IP +LG D++ A++G GKTA F L
Sbjct: 5 SLGFSPALL-PAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPM 63
Query: 424 LQQLEPSES----HVYVLVMCHTRELAFQISKEYERFSKYM-SGVRVSVFFGGMPIQKDE 588
LQQL + + L++ TRELA Q+ + F+KY+ V+V+V FGG+ I
Sbjct: 64 LQQLANAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQM 123
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNP 768
L+ IVV TPGR+L +LDE D++L+ L ++ I
Sbjct: 124 MNLRGGA-DIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLD-LGFGEELGRILELL 181
Query: 769 PHGKQVMMFSAXLSKEIRPVCKNL 840
P +Q + FSA I + +++
Sbjct: 182 PPRRQNLFFSATFPPAIEVLAESM 205
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 101 bits (243), Expect = 2e-20
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 2/198 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF +L ++ GF P+ +Q E IP + D++ A++G GKTA ++L L +
Sbjct: 3 FNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILHK 62
Query: 433 -LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE-VLKTA 606
+E + + LV+ TRELA QI ++ E FS +++ ++V+ GG D++ T
Sbjct: 63 IIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKALTD 122
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
+IV+ TPGR+LA +LDE D+ML+ + D+ + P +Q
Sbjct: 123 GANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLD-MGFYDDIVRVISYLPTERQT 181
Query: 787 MMFSAXLSKEIRPVCKNL 840
+MFSA + ++R + L
Sbjct: 182 IMFSATMPTKMRALANKL 199
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 101 bits (243), Expect = 2e-20
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+DF LKPEIL A+ G P+ +Q +P A+ G D++ QA++G GKT F L ++
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 433 LEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L PS+ LV+ TRELA Q++ E + ++ V V +GG K +E L
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVAV---YGGTGYGKQKEALLR 119
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
VV TPGR L +LDE D+ML S+ +V+ + P +Q
Sbjct: 120 GA-DAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEML-SMGFEEEVEALLSATPPSRQ 177
Query: 784 VMMFSAXL 807
++FSA L
Sbjct: 178 TLLFSATL 185
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 101 bits (243), Expect = 2e-20
Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 8/197 (4%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L ++RAI + G+E+ S +Q +P A+ G D + +A++G GKTA F++ +
Sbjct: 29 FHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITAITD 88
Query: 433 -LEPSESHVYV-----LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 594
LE YV L++ TRELA QI+++ + +KY S ++V+ GGM K ++
Sbjct: 89 LLEHRLEEQYVGEPRALILAPTRELALQIAEDAKALTKY-SRLKVAAVVGGMDFDKQKQQ 147
Query: 595 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP- 771
L I+V TPGR++ I+DE D+ML+ + D++ I R P
Sbjct: 148 LHEQRTDILVATPGRLIDFMNRKAVFLDQIEMLIIDEADRMLD-MGFIPDIKTIVRATPR 206
Query: 772 -HGKQVMMFSAXLSKEI 819
+Q ++FSA S++I
Sbjct: 207 TENRQTLLFSATFSQDI 223
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 101 bits (243), Expect = 2e-20
Identities = 72/201 (35%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPS- 444
L +L+A+ D F + +Q E IP A+ G DI+ +A++G GKTA F+L L++L S
Sbjct: 37 LSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALERLLRSP 96
Query: 445 ---ESHVY------------VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQ 579
S V VLV+ +RELA Q E +KY + +V GGM IQ
Sbjct: 97 YVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTGGMNIQ 156
Query: 580 KDEEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEI 756
+ E +LK PHIV+ TPGRIL ILDE D++L+ + R++ EI
Sbjct: 157 QQERILKCQ-PHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLD-MGFRQECLEI 214
Query: 757 FRNPPHGKQVMMFSAXLSKEI 819
+ +Q M+FSA LS+ +
Sbjct: 215 LKYSSRTRQTMLFSATLSRSV 235
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 101 bits (242), Expect = 2e-20
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Frame = +1
Query: 307 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE-SHVYVLVMCHTR 483
F P+E+Q + IP + G D++ ++K+G GKTA ++L L +E + V +++ TR
Sbjct: 16 FTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEKLKGKSVKAIIILPTR 75
Query: 484 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXX 663
ELA Q + R K +SG++ ++ +GG I + E L + IV+GTPGRIL
Sbjct: 76 ELALQTHRVASRLGK-ISGIKSTIVYGGASIIRQVEELPGS--DIVIGTPGRILDLYNQK 132
Query: 664 XXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCKN 837
+LDE D ML+ + D+++I P G+Q ++ SA L E++ + +
Sbjct: 133 YLKLDHVKYLVLDEADLMLD-MGFIDDIKKIISFTPEGRQTILLSATLPAEVKTIANH 189
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 101 bits (242), Expect = 2e-20
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L P IL++++ G+E+ + VQ + IP A+ G D+L + +G GKTA F+L ++Q+
Sbjct: 3 FSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSIQR 62
Query: 433 L--EPSESHV--YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
L EP+ + VLV+ TRELA Q+ K + K M R + GG P + L
Sbjct: 63 LLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLKRLS 122
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
+VV TPGR++ +LDE D+ML+ + D++ I P +
Sbjct: 123 QPV-DVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLD-MGFVDDIKAIAARCPAER 180
Query: 781 QVMMFSAXLSKEIRPVCKNL 840
Q ++FSA L + + + L
Sbjct: 181 QTLLFSATLDGVVGNLAREL 200
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 101 bits (242), Expect = 2e-20
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Frame = +1
Query: 187 GSTEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMD 366
G+T + KE + + S G L P ++ A+ G+E P+ +Q +P + G D
Sbjct: 21 GATSPSTVKETSAADNTFESLG-----LLPPLVEALSALGYEEPTPIQRAALPPLLEGKD 75
Query: 367 ILCQAKSGMGKTAVFVLATLQQLEPSESHVY---VLVMCHTRELAFQISKEYERFSKYMS 537
+L A +G GKTA F L LQ++ P + LV+ TRELA Q+++ R+ + +
Sbjct: 76 LLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKL- 134
Query: 538 GVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKM 717
G+ V +GG I + VLK +VV TPGR L +LDE D+M
Sbjct: 135 GISVVPLYGGQVISQQLRVLKRGV-DVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEM 193
Query: 718 LESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
L+ + D++ I + P +Q +FSA L I + +
Sbjct: 194 LD-MGFAEDLEAILSSTPEKRQTALFSATLPPRIASIAE 231
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 101 bits (242), Expect = 2e-20
Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 4/200 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F F L P++ AI G+ P++VQ IPQA+ G D+L A++G GKTA ++L L +
Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61
Query: 433 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
+ ++ + VLVM TRELA Q+ K+ E ++ +G++ + GG Q +L+
Sbjct: 62 VLSERKPKAGIRVLVMVPTRELAQQVMKDCEALTQ-QTGLKTVIIRGGQEFQYQASLLRR 120
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
P IV+ TPGR+ +LDECD+ML+ + R +V I + Q
Sbjct: 121 N-PEIVIATPGRMTEHLNKNSTDLLDVECLVLDECDRMLD-MGFRDEVLAIAGQIRNDHQ 178
Query: 784 VMMFSAXLS-KEIRPVCKNL 840
++ SA L + + V K++
Sbjct: 179 TLLLSATLKHRGVSSVAKDI 198
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 101 bits (241), Expect = 3e-20
Identities = 59/196 (30%), Positives = 102/196 (52%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F +K EIL+++ + GFE P+++Q +P A G DI+ QA++G GKTA F + L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L+ S + + LV+ TRELA QI + KY ++++ GG+ +K + L +
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCS-KIALILGGVSYEKQKAALNSGV- 120
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+IVV TPGR+ F LDE D++L+ + ++ +I P +Q
Sbjct: 121 NIVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLK-IGFYNEIIKIMNKLPKKRQNFF 179
Query: 793 FSAXLSKEIRPVCKNL 840
F+A ++ + + + +
Sbjct: 180 FTATFDEKTKKLSQEI 195
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 101 bits (241), Expect = 3e-20
Identities = 52/195 (26%), Positives = 107/195 (54%), Gaps = 1/195 (0%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
L E+L+++V G E P+++Q + IP+ + G +++ +A++G GKT ++L +++++ S+
Sbjct: 9 LSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEKIDDSK 68
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYM-SGVRVSVFFGGMPIQKDEEVLKTACPHIVV 624
+ + +++ T EL QI+ + + + + G I++ E LK PHI+V
Sbjct: 69 NEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKNK-PHILV 127
Query: 625 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAX 804
GT GRIL ++DE DK+L+ +++ +DV+ + ++ P Q ++FSA
Sbjct: 128 GTTGRILELINKKKITTNTIKTIVIDEGDKLLDFINI-KDVKSVVKSCPRDTQKLIFSAT 186
Query: 805 LSKEIRPVCKNLCXT 849
++++ L T
Sbjct: 187 MNEKALETADELIGT 201
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 101 bits (241), Expect = 3e-20
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Frame = +1
Query: 274 PEILRAIVDC-GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSES 450
PE L ++ GF +E+Q + I + G DIL Q+K+G GKT F + + + +
Sbjct: 11 PEALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSN 70
Query: 451 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 630
+V+ TRELA Q++ E + + Y + +++ +GG+P++ + L HI++GT
Sbjct: 71 KPQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGA-HILIGT 129
Query: 631 PGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLS 810
PGRI +LDE D+ML+ + ++ +I N P KQ ++FSA
Sbjct: 130 PGRIQDHLAKGTLTLESIKTLVLDEADRMLD-MGFYEEIIKIGSNMPKQKQTLLFSATFP 188
Query: 811 KEIRPVCKNL 840
+I + K L
Sbjct: 189 PKIESLAKAL 198
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 101 bits (241), Expect = 3e-20
Identities = 57/196 (29%), Positives = 102/196 (52%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
S F+++ + +ILRA+ G+ P++VQ IP A+ D++ ++++G GKTA F +
Sbjct: 2 SHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLC 61
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
+ E+ L++ TRELA Q+ ++ ++ ++ + FG K + LK
Sbjct: 62 ELANWDENKPQALILTPTRELAVQVKEDITNIGRF-KRIKATAVFGKSSFDKQKAELKQK 120
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
HIVVGTPGR+L ++DE D+ML ++ V+ I ++ P +
Sbjct: 121 -SHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEML-NMGFIEQVEAIIKHLPTERTT 178
Query: 787 MMFSAXLSKEIRPVCK 834
M+FSA L ++I + +
Sbjct: 179 MLFSATLPQDIEKLSR 194
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 100 bits (240), Expect = 4e-20
Identities = 59/195 (30%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+D L PE+L+ + G++ P+ +Q IP A+ DI+ A++G GKTA F+L +Q
Sbjct: 11 FKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQH 70
Query: 433 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L + Y +++ TRELA Q+ + + K + G+ + GGM + K + V
Sbjct: 71 LLNVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMK-QSVQLA 129
Query: 604 ACPHIVVGTPGRI---LAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPH 774
P ++VGTPGRI + ++DE DK+LE +D ++ + P
Sbjct: 130 KRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLE-MDFANEIDYLIEKLPK 188
Query: 775 GKQVMMFSAXLSKEI 819
+ M+FSA +S ++
Sbjct: 189 QRTTMLFSATMSTKV 203
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 100 bits (240), Expect = 4e-20
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F F L EIL+AI + G+ P+ +Q + IP + G D++ A++G GKTA F L +Q+
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 433 L--------EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
L P+ V L++ TRELA Q++ ++K+ + +R +V FGG+ +
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKH-TPLRSAVVFGGVDMNPQM 131
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNP 768
L+ I++ TPGR+L +LDE D+ML+ + D+Q I
Sbjct: 132 AELRRGV-EILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLD-MGFLPDLQRILNLL 189
Query: 769 PHGKQVMMFSAXLSKEIR 822
P +Q ++FSA S EI+
Sbjct: 190 PKERQTLLFSATFSPEIK 207
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 100 bits (240), Expect = 4e-20
Identities = 59/196 (30%), Positives = 98/196 (50%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+D LK IL AI G++ P+ +Q++ + + G D L +AK+G GKTA F + LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L H VL++ REL QIS+E+ + K + RV+ GG + ++ L A
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLSGVKKSLHGA-- 124
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
++ TPGR++ ++DE D++ + + R V I ++ P Q ++
Sbjct: 125 QVISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFD-MGFREAVTSILKDLPKSVQTVL 183
Query: 793 FSAXLSKEIRPVCKNL 840
SA + +I+ K L
Sbjct: 184 CSATFTDDIKNFSKTL 199
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 100 bits (240), Expect = 4e-20
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
L PEILRA+ D G P+ +Q + IP + G D+L A++G GKT F+L L ++
Sbjct: 8 LSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLHKIAEGR 67
Query: 448 SHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 618
H LV+ TRELA QI + + ++KY+ + GG+ + E LK I
Sbjct: 68 RHGIRNRALVLSPTRELATQIHQAAKDYAKYLH-TNAVLLVGGVDFIRQERNLKRNW-DI 125
Query: 619 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFS 798
VV TPGR+L I+DE D+ML+ + D+ I R P G+Q ++FS
Sbjct: 126 VVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLD-MGFLPDINTIVRQLPKGRQSLLFS 184
Query: 799 AXLSKEIR 822
A I+
Sbjct: 185 ATCPPRIQ 192
>UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA
helicase-like; n=9; Eukaryota|Rep: Myc-regulated DEAD/H
box 18 RNA helicase-like - Ostreococcus tauri
Length = 2729
Score = 100 bits (240), Expect = 4e-20
Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 7/224 (3%)
Frame = +1
Query: 187 GSTEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDC-GFEHPSEVQHECIPQAVLGM 363
G+ A + E +GS ++ F + L RAI D GF H + VQ +P + G+
Sbjct: 2181 GTLARAVRVESQGSNAPSSTAAFANMGLTEASARAIRDVMGFTHATSVQDATLPHIMQGL 2240
Query: 364 DILCQAKSGMGKTAVFVLATLQQL----EPSESHVYVLVMCHTRELAFQISKEYERFSKY 531
D+L +AK+G GKT F+L +++L P +V LV+ TRELA QI +E + +
Sbjct: 2241 DVLARAKTGSGKTVGFLLPAIERLARAGAPQRGNVSCLVISPTRELASQIGEEAKSLLSF 2300
Query: 532 MSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL--AXXXXXXXXXXXXXXFILDE 705
+ V FGG I + + LKT ++ TPGR++ +LDE
Sbjct: 2301 -HPFKCQVVFGGTNINSERKRLKTEPVEFLIATPGRLIDHFESGDLARACQNLDVLVLDE 2359
Query: 706 CDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCKN 837
D++L+ + R +++I P+ +Q ++FSA + K + + N
Sbjct: 2360 ADQLLD-MGFRPSLEKILSFLPNQRQTLLFSATVPKTVHQIAAN 2402
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 100 bits (240), Expect = 4e-20
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Frame = +1
Query: 304 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTR 483
GF+ PS +Q IP+ + G DI+ AK+G GKTA F + L QL V+ +++ TR
Sbjct: 23 GFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTR 82
Query: 484 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXX 663
ELA QI +++ M+ V SV GG+ + ++ PHI+V TPGR+ +
Sbjct: 83 ELAVQIGEQFNAIGAPMN-VNCSVVIGGID-NVTQALILDKRPHIIVATPGRLASHLNNG 140
Query: 664 XXXXXXXXXF-ILDECDKMLESLDMRRDVQEIFRN--PPHGKQVMMFSAXLSKEI 819
F +LDE D++L D ++ I + PP +Q ++FSA ++K +
Sbjct: 141 LKIALKFCKFLVLDEADRLLGE-DFELEIASILEHLPPPEKRQTLLFSATMTKNL 194
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 100 bits (240), Expect = 4e-20
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 3/188 (1%)
Frame = +1
Query: 265 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--E 438
L+KP +L+A+ + +E P+ +Q IP A+ G D+L + +G GKTA F++ LQ+
Sbjct: 197 LIKP-LLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQKFYRS 255
Query: 439 PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 618
P ++ L++ TRELAFQI + + + +KY + +R + G +QK E L+ P +
Sbjct: 256 PFTNYSKALIVTPTRELAFQIYEVFTKLNKY-TKLRACLVIGQSAMQKQEAELR-GNPEV 313
Query: 619 VVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMF 795
++ TPGR++ I DE DK+L+ L Q I N +Q ++F
Sbjct: 314 IIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLD-LGFEAAAQNIVENCNRERQTLLF 372
Query: 796 SAXLSKEI 819
SA L+ E+
Sbjct: 373 SATLTSEV 380
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 100 bits (239), Expect = 6e-20
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 1/194 (0%)
Frame = +1
Query: 241 HSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLA 420
H F + L ++L AI + G+ P+E+Q + IPQ + G DI+ A++G GKTA + L
Sbjct: 3 HPLNFEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALP 62
Query: 421 TLQQLEPSESH-VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
L +++ ++ H ++ TREL QI ++ +KY + +R+ +GG+ + +E L
Sbjct: 63 ILMKIKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKY-TDLRIVALYGGIGPKLQKEHL 121
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
+ I+V TPGR L +LDE DKM++ + ++++ P
Sbjct: 122 QKGV-DIIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMD-MGFMPQLRKMLEVIPRK 179
Query: 778 KQVMMFSAXLSKEI 819
+Q ++FSA +S+ +
Sbjct: 180 RQNLLFSATMSERV 193
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 100 bits (239), Expect = 6e-20
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF---VLAT 423
F + L P I +++ + GF P+++Q + IP + G D+L A++G GKTA F VL T
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 424 LQQLEPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
L ++ SE + + LVM TRELA QIS+ +++ Y + +R GG+ Q+ +
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAY-TRLRTVCITGGVE-QEAQIAAA 120
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
I+V TPGR+ +LDE D ML+ L +D+Q++ + P
Sbjct: 121 DYGIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLD-LGFIKDIQDVKKFLPARH 179
Query: 781 QVMMFSAXLSKEIRPVCKNL 840
Q + FSA +++EI+ + +L
Sbjct: 180 QTLFFSATINEEIKKLAYSL 199
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 100 bits (239), Expect = 6e-20
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + + E+ + I + GF + +Q + +P A+ G D+ QA++G GKTA F+++ +
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 433 L-----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
L E H L++ TREL QI K+ + KY +G + +GG+ K + L
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKY-TGFNIQAIYGGVDYMKQRDAL 121
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRN-PPH 774
K A IV+GTPGR++ ++DE D+M + + D++ I R PP+
Sbjct: 122 K-AGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFD-MGFIADLRFILRRLPPY 179
Query: 775 GK-QVMMFSAXLSKEI 819
K Q ++FSA L+ +
Sbjct: 180 DKRQNLLFSATLNTRV 195
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 100 bits (239), Expect = 6e-20
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 8/211 (3%)
Frame = +1
Query: 214 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 393
+V GS V F L+ I+ + G++ P+ +Q IP G D++ A++G
Sbjct: 234 KVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGS 293
Query: 394 GKTAVFVLATLQQL--EPSESHV---YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVF 558
GKTA F+L L +L +P E + V+++ TRELA QI E +F+ + S +++ +
Sbjct: 294 GKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFA-FESYLKIGIV 352
Query: 559 FGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE---SL 729
+GG + E + C H+V+ TPGR+L +LDE D+ML+ S
Sbjct: 353 YGGTSFRHQNECITRGC-HVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSE 411
Query: 730 DMRRDVQEIFRNPPHGKQVMMFSAXLSKEIR 822
DMRR + + P H Q +MFSA +EI+
Sbjct: 412 DMRRIMTHVTMRPEH--QTLMFSATFPEEIQ 440
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 99 bits (238), Expect = 7e-20
Identities = 57/195 (29%), Positives = 99/195 (50%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F++ L ++L A+ F +E+Q IP + G +I ++ +G GKTA FVL L++
Sbjct: 3 FKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEK 62
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
+EP++ V ++M TRELA QI + F + + ++ GG ++ + LK +
Sbjct: 63 IEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS-- 120
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
IVVGTPGR+ ILDE D+ML+ + + ++ +F Q+ +
Sbjct: 121 QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLK-MGFKNEIDALFERVSPDVQIGL 179
Query: 793 FSAXLSKEIRPVCKN 837
FSA S ++ + +
Sbjct: 180 FSATTSPKVMQIAND 194
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 99 bits (238), Expect = 7e-20
Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG-MDILCQAKSGMGKTAVFVLAT 423
S F ++ + +++I + G P+++Q + IP + D + A++G GKTA F L
Sbjct: 2 STFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPV 61
Query: 424 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG-VRVSVFFGGMPIQKDEEVLK 600
L ++ + H+ L++ TREL QI K+ +F+KY+ + + FGG I + LK
Sbjct: 62 LHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLK 121
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFR-NPPHG 777
HIV+ TPGR++ ILDE D+ML S+ ++D+ I +
Sbjct: 122 RT-THIVIATPGRLIDLIERGAVDISHVKTVILDEADEML-SMGFKQDLNRILKFTTKSD 179
Query: 778 KQVMMFSAXLSKEIRPVCK 834
++ +FSA + EI+ + K
Sbjct: 180 RKTWLFSATMPDEIKRIVK 198
>UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 533
Score = 99 bits (238), Expect = 7e-20
Identities = 69/198 (34%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L ILR I D F + + +Q +P + G+D +A++G GKTAVF++ L Q
Sbjct: 118 FHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLDAAGRAQTGTGKTAVFIITMLTQ 177
Query: 433 L--EPS-----ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
P+ + LV+ TRELA QI KE S++ V++ FGGM +K +
Sbjct: 178 FLRNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPFKSVAI-FGGMDYEKQKR 236
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFR-NP 768
L IVV TPGR+L ++DE D+ML+ + DVQ I P
Sbjct: 237 RLTGEVIDIVVATPGRLLDFKRQGDLHLSKVEILVIDEADRMLD-MGFIPDVQRIIHYTP 295
Query: 769 PHG-KQVMMFSAXLSKEI 819
P +Q M+FSA L+ E+
Sbjct: 296 PKAQRQTMLFSATLTAEV 313
>UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1;
Caldivirga maquilingensis IC-167|Rep: DEAD/DEAH box
helicase-like - Caldivirga maquilingensis IC-167
Length = 359
Score = 99 bits (238), Expect = 7e-20
Identities = 64/192 (33%), Positives = 100/192 (52%)
Frame = +1
Query: 265 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPS 444
LLK E+ RAI + GF P+EVQ IP+ + G ++ QA++G GKTA ++L T+ ++
Sbjct: 5 LLKEELRRAISEYGFNEPTEVQRSVIPKILDGFNVAMQARTGSGKTAAYLLPTMSMMKGD 64
Query: 445 ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 624
LV+ TRELA QI ++ F+KY + +V +GG+ + L+ A ++V
Sbjct: 65 LGE--ALVISPTRELALQIMNQFLIFNKY-TKFNSAVVYGGVGYSGQVKALRDA--SLIV 119
Query: 625 GTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAX 804
TPGR+L I+DE D+ML+ + +DV I + KQ +A
Sbjct: 120 ATPGRLLDLTGKSIVDLSNVKYLIIDEVDRMLD-MGFIKDVYTISSLTGNRKQTHAATAT 178
Query: 805 LSKEIRPVCKNL 840
L E+ V K +
Sbjct: 179 LPSEVHDVVKRV 190
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 99.5 bits (237), Expect = 1e-19
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+ F L IL+AI + G++ P+ +Q + IP+ +L +L A++G GKTA FVL L +
Sbjct: 3 FQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILDK 62
Query: 433 LEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L + S VL++ TRELA QI+ +++S+Y+ + GG+ +
Sbjct: 63 LTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLR-INSITITGGISYGLQNRMFSK 121
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
I+V TPGR+L ILDE D+ML+ + D+++I+ +Q
Sbjct: 122 PI-DILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLD-MGFVPDIRKIYNATSKKQQ 179
Query: 784 VMMFSAXLSKEIRPVCK 834
++MFSA I+ + +
Sbjct: 180 MLMFSATFDPPIQKIAQ 196
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 99.5 bits (237), Expect = 1e-19
Identities = 60/188 (31%), Positives = 99/188 (52%)
Frame = +1
Query: 256 RDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL 435
++F L E++ A+ P+E+Q + IP A+ G DIL +++G GKT ++L +
Sbjct: 6 KNFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSF 65
Query: 436 EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPH 615
+++ +LV TRELA QI + + + +V GG P+ K LK P
Sbjct: 66 IKNKTTALILV--PTRELATQIHSTLNKVTTSYK-INSAVLIGGEPMPKQFIQLKKN-PK 121
Query: 616 IVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMF 795
+++GTPGRI+ +LDE D+ML+ + M+ ++EI + P +QV+MF
Sbjct: 122 VIIGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLD-MGMKEQLEEINKFLPEKRQVLMF 180
Query: 796 SAXLSKEI 819
SA + K I
Sbjct: 181 SATMPKHI 188
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 99.5 bits (237), Expect = 1e-19
Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 2/203 (0%)
Frame = +1
Query: 238 IHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL 417
I S F D ++ +++ + + P+ VQ + IP + G D+L A++G GKTA F L
Sbjct: 4 IMSVNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGL 63
Query: 418 ATLQQLEPSESH--VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
+Q ++ + + + L++ TRELA Q+ +++++ + +R+ +GG I +
Sbjct: 64 PIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEH-TDLRIVCVYGGTSIGVQKN 122
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
L+ I++ TPGR+L +LDE D+ML+ + D+Q I R P
Sbjct: 123 KLEEGA-DILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLD-MGFWPDLQRILRRLP 180
Query: 772 HGKQVMMFSAXLSKEIRPVCKNL 840
+ KQ+M+FSA K I+ + L
Sbjct: 181 NDKQIMLFSATFEKRIKTIAYKL 203
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 99.5 bits (237), Expect = 1e-19
Identities = 60/196 (30%), Positives = 104/196 (53%), Gaps = 4/196 (2%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
+S F + L PE+ + + G+E P+ +Q + IP + G D+L +A++G GKTA F L
Sbjct: 3 ASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPI 62
Query: 424 LQQL--EPSESH--VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
+++L P + + V LV+ TRELA Q++ + + + G+RV +GG+P++ +
Sbjct: 63 IEKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDL-GMRVISVYGGVPVENQIK 121
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
LK I+V TPGR+L +LDE D+ML+ L +Q+I
Sbjct: 122 RLKRG-TDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLD-LGFIDPIQKIMDYAA 179
Query: 772 HGKQVMMFSAXLSKEI 819
+Q ++F+A + +
Sbjct: 180 DDRQTLLFTATADESV 195
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 99.5 bits (237), Expect = 1e-19
Identities = 63/194 (32%), Positives = 93/194 (47%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L EIL A+ D GF P+ +Q IP + D++ A++G GKTA F L L
Sbjct: 47 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAAFGLPLLAI 106
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ E +V LV+ TRELA Q ++ E F+ + + V +GG P LK
Sbjct: 107 VDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQIGALKRGA- 165
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
+VVGTPGR++ +LDE D+ML + DV+ I + P + +
Sbjct: 166 QVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLR-MGFAEDVETIASSAPDDRLTAL 224
Query: 793 FSAXLSKEIRPVCK 834
FSA + I V +
Sbjct: 225 FSATMPAAIEKVAR 238
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 99.1 bits (236), Expect = 1e-19
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 5/194 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
FR + IL+AI + G++ P+ +Q E IP + G D+L A++G GKTA F + LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 433 LEPSESH-----VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
L +++ + L++ TRELA QI + ++ + ++ +G+ +V FGG+ L
Sbjct: 144 LNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRH-TGLTSTVIFGGVNQNPQTASL 202
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
+ I++ TPGR+L F+LDE D+ML+ + D+++I P
Sbjct: 203 QKGI-DILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLD-MGFIHDIRKILAELPKK 260
Query: 778 KQVMMFSAXLSKEI 819
KQ + FSA + EI
Sbjct: 261 KQSLFFSATMPPEI 274
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 99.1 bits (236), Expect = 1e-19
Identities = 60/200 (30%), Positives = 100/200 (50%)
Frame = +1
Query: 238 IHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL 417
+ + F + L + RAI + G+E P+ VQ G D++ ++K+G GKTA F +
Sbjct: 17 VSQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAI 76
Query: 418 ATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
L+++ LVMC TRELA Q+++E+ +K+ + V +GG + + + L
Sbjct: 77 PILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRD-LSVVAVYGGASMGEQLQKL 135
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
+ A I+VGTPGRI LDE D+ML ++ +V I N P
Sbjct: 136 E-AGAEIIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEML-NMGFFEEVTRILDNLPKD 193
Query: 778 KQVMMFSAXLSKEIRPVCKN 837
Q ++FSA + +I + ++
Sbjct: 194 CQQLLFSATVPADIEQIIRD 213
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 99.1 bits (236), Expect = 1e-19
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 5/201 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F++ L + +A+V+ ++ P+ +Q + IP A+ G D+L A++G GKTA L L Q
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILNQ 63
Query: 433 LEPSE-----SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
L + H LV+ TRELA QI ++ + +++ +R + +GG+ + L
Sbjct: 64 LGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLK-LRSVLIYGGVGQGNQVKAL 122
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
K HI+V TPGR+L F+LDE D+ML+ + D++ I P
Sbjct: 123 KRGA-HILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLD-MGFLPDLKRIITQLPTQ 180
Query: 778 KQVMMFSAXLSKEIRPVCKNL 840
+Q + FSA L+ +I + +L
Sbjct: 181 RQSLFFSATLAPKITELAHSL 201
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 99.1 bits (236), Expect = 1e-19
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 1/197 (0%)
Frame = +1
Query: 232 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 411
+ +H+ F+D L + A+ D F+ P+ +Q + + G D++ A++G GKT +
Sbjct: 4 IKLHTLSFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAY 63
Query: 412 VLATLQQLEPSES-HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
+L L+ L+ SE + +L+M TREL Q+ +E E+ +KY++ +RV+ +GG+ I
Sbjct: 64 LLPLLRMLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYIN-LRVAGVYGGVNINTQH 122
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNP 768
+ L IVV TP R+ F++DE D ML+ L + V I
Sbjct: 123 QDLMQGL-DIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLD-LGFKFQVNNIIELL 180
Query: 769 PHGKQVMMFSAXLSKEI 819
P +Q +MFSA +++ +
Sbjct: 181 PKNRQSIMFSATMTETV 197
>UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA
splicing; n=1; Bigelowiella natans|Rep: UB2 probably
involved in pre-mRNA splicing - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 398
Score = 99.1 bits (236), Expect = 1e-19
Identities = 52/172 (30%), Positives = 88/172 (51%)
Frame = +1
Query: 325 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQIS 504
VQ + AV DI+CQ + G+GKT ++V+A ++Q+ S + V L + TRELA QI
Sbjct: 55 VQLLTLVHAVSNCDIICQGRPGIGKTLIYVVAFIEQINESFNTVQALSIAPTRELAIQIF 114
Query: 505 KEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXX 684
+++ S+ +++ GG P ++ P ++V T GR+
Sbjct: 115 WIFKKLSQNEESLKIFCLIGGTPFDNQARKIRKITPKLIVSTLGRLYQQVRTKKVLLNFV 174
Query: 685 XXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCKNL 840
+DECD ++ES + + + +IF KQV++ S +S + + VCKNL
Sbjct: 175 NFLAIDECDHIIESQKLFKILIKIFEETHSNKQVILMSTTMSIQTKLVCKNL 226
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 99.1 bits (236), Expect = 1e-19
Identities = 60/183 (32%), Positives = 86/183 (46%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L +LR + F HPS +Q IP A LG+D+L QAKSG GKT VF + +
Sbjct: 24 FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSGTGKTLVFTVLITEN 83
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
P L + TRE+A QI R + R F GG+ I +D + L++
Sbjct: 84 HNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGLDISQDRKNLQSC-- 141
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
VVGTPGRI +LDE D ++ ++ +V +I + P +Q ++
Sbjct: 142 SAVVGTPGRINHLIKSNVLNTSQIKILVLDEADSLITG-SLKPEVDQIVKMLPTKRQTVV 200
Query: 793 FSA 801
SA
Sbjct: 201 CSA 203
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 99.1 bits (236), Expect = 1e-19
Identities = 61/189 (32%), Positives = 98/189 (51%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + +K +L A+ D GFE +Q IP + G D++ QA +G GKT + ++ LQ+
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
++ + L++ TRELA QI++E ++F+KY + VR +GG + + LK
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKY-TKVRPVAIYGGQSMGVQLDALKRGA- 120
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMM 792
I+V TPGR++ +LDE D ML+ + D+Q I P K + +
Sbjct: 121 EILVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLD-MGFIDDIQFILDLTPDEKVMSL 179
Query: 793 FSAXLSKEI 819
FSA + EI
Sbjct: 180 FSATMPIEI 188
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 99.1 bits (236), Expect = 1e-19
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 9/205 (4%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
S F F L +LRA+ F P+ +Q IP A+ G DI+ A +G GKTA F++ T+
Sbjct: 333 SSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTI 392
Query: 427 QQL-------EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 585
++L P E+ VL++ TRELA Q + +K+ + +R + GG+ ++
Sbjct: 393 ERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKF-TDIRFCLCVGGLSVKSQ 451
Query: 586 EEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFR 762
E LK P +V+ TPGR++ ++DE D+MLE ++ EI +
Sbjct: 452 EAELKLR-PEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLED-GFADELNEIVK 509
Query: 763 NPPHG-KQVMMFSAXLSKEIRPVCK 834
+ P G +Q M+FSA ++ ++ + +
Sbjct: 510 SCPKGARQTMLFSATMTDDVEQLVR 534
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 98.7 bits (235), Expect = 2e-19
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 3/192 (1%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
+GF L P ++ G P+ VQ C+P + G D + AK+G GKTA FVL L
Sbjct: 2 AGFGALGLAPWLVEQCQQLGLRQPTPVQQSCVPAILEGRDCMGCAKTGSGKTAAFVLPIL 61
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
Q+L ++ LV+ TRELA+QI++++ K + G++ + GGM + L
Sbjct: 62 QKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL-GLKDCIVVGGMDMVTQALDLSRK 120
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLES--LDMRRDVQEIFRNPPHG 777
PH+V+ TPGR+ F ++DE D++LE + +D++ I P
Sbjct: 121 -PHVVIATPGRLADHLRSSSTFSIKKIRFLVMDEADRLLEQGCSEFTKDLKVILGAVPDL 179
Query: 778 KQVMMFSAXLSK 813
+Q ++FS +K
Sbjct: 180 RQTLLFSPSPAK 191
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 98.7 bits (235), Expect = 2e-19
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 8/205 (3%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF + ++ I D FE+ + +Q + + + G D++ +A +G GKTAVF++ + +
Sbjct: 96 FHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGVMAR 155
Query: 433 LEPSES------HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 594
L + L++ TREL QI K+ ++ +Y +GV +GG +K E+
Sbjct: 156 LLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRY-TGVNADAVYGGAEYEKQMEL 214
Query: 595 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP- 771
LK IVV TPGR++ ++DE D+ML+ + DV+ I P
Sbjct: 215 LKRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLD-MGFIPDVRRIVSWMPK 273
Query: 772 -HGKQVMMFSAXLSKEIRPVCKNLC 843
+Q +MFSA +S ++ + C
Sbjct: 274 KRDRQTLMFSATISSDVNNLSAQWC 298
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 98.7 bits (235), Expect = 2e-19
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 10/219 (4%)
Frame = +1
Query: 211 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 390
K + + VS+ +S F D ++ +I +A+ G P +Q IP AV G D++ QA++G
Sbjct: 42 KTLTETTVSVPTS-FADLGVREDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTG 100
Query: 391 MGKTAVFVLATLQQLE----------PSESHVYVLVMCHTRELAFQISKEYERFSKYMSG 540
GKT F + L ++ ++ LVMC TRELA Q+SK+ + + G
Sbjct: 101 TGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDISTAAS-VRG 159
Query: 541 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 720
RV +GG+ + + LK A +VVGTPGR+L +LDE D+ML
Sbjct: 160 ARVLTVYGGVGYESQIDALK-AGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEML 218
Query: 721 ESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCKN 837
+ L DV+ + P +Q M+FSA + I + ++
Sbjct: 219 D-LGFLPDVENLIGRTPASRQTMLFSATMPAPIMALARS 256
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 98.7 bits (235), Expect = 2e-19
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Frame = +1
Query: 304 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE----PSESHVYVLVM 471
G++ P+ +Q + IP + G D++ A++G GKTA FVL L++L P + + LV+
Sbjct: 20 GYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLEKLHSIPAPGNNLTHALVL 79
Query: 472 CHTRELAFQISKEYERFSKYM-SGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILA 648
TRELA Q+S+ +R+S+ +R +GG I + L C IVV TPGR+L
Sbjct: 80 VPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQSLSKGC-DIVVATPGRLLD 138
Query: 649 XXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPV 828
+LDE D+ML+ L ++ +I P Q ++FSA +++ +
Sbjct: 139 LMRKNALDLRGLKALVLDEADRMLD-LGFADELDDILDQTPGNVQTLLFSATFPDKVKEL 197
Query: 829 CKNL 840
+ L
Sbjct: 198 TEEL 201
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 98.3 bits (234), Expect = 2e-19
Identities = 55/193 (28%), Positives = 102/193 (52%), Gaps = 2/193 (1%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
++P + +A GF+ +E+Q + IP + G D++ ++ +G GKT ++L L ++ P
Sbjct: 5 MQPFLQQAWEKAGFKELTEIQKQAIPTILEGQDVIAESPTGTGKTLAYLLPLLHKINPEV 64
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS--VFFGGMPIQKDEEVLKTACPHIV 621
V+V+ TREL QI +E ++F+ +G +S GG I++ E LK P ++
Sbjct: 65 KQPQVVVLAPTRELVMQIHEEVQKFT---AGTEISGASLIGGADIKRQVEKLKKH-PRVI 120
Query: 622 VGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSA 801
VG+PGRIL + DE D++++ M VQ++ ++ +Q++ FSA
Sbjct: 121 VGSPGRILELIRMKKLKMHEVKTIVFDEFDQIVKQ-KMMGAVQDVIKSTMRDRQLVFFSA 179
Query: 802 XLSKEIRPVCKNL 840
++K ++L
Sbjct: 180 TMTKAAEDAARDL 192
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 98.3 bits (234), Expect = 2e-19
Identities = 53/179 (29%), Positives = 94/179 (52%)
Frame = +1
Query: 304 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTR 483
GF+ P+ VQ + + G D++ ++ +G GKT + L L++++P + H +++ +R
Sbjct: 23 GFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSR 82
Query: 484 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXX 663
EL QI + + + K S +R + GG ++K E LK PHI+VGTPGR+
Sbjct: 83 ELVMQIFQVIQDW-KAGSELRAASLIGGANVKKQVEKLKKH-PHIIVGTPGRVFELIKAK 140
Query: 664 XXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPVCKNL 840
+LDE D+++ + R +++I + +Q++ FSA L KE V + L
Sbjct: 141 KLKMHEVKTIVLDETDQLVLP-EHRETMKQIIKTTLRDRQLLCFSATLKKETEDVLREL 198
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 98.3 bits (234), Expect = 2e-19
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 5/194 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L +L+A+ D G+ P+ +Q + IP + G D+L A++G GKTA F L L +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 433 L----EPSESHVY-VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
L +P+ + LV+ TRELA QI++ + + K+M G+ V+ FGG+ + L
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHM-GLTVATIFGGVKYGPQMKAL 185
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
A +VV TPGR++ F+LDE D+ML+ L +++I P
Sbjct: 186 -AAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLD-LGFVVPIRKIASQLPKE 243
Query: 778 KQVMMFSAXLSKEI 819
+Q + FSA + EI
Sbjct: 244 RQNLFFSATMPSEI 257
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 98.3 bits (234), Expect = 2e-19
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
+S F F L +L+A+ + F P+ VQ IP A+ G D+ A++G GKTA FVL
Sbjct: 181 TSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPL 240
Query: 424 LQQ---LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 594
L + L+ + + L++ TRELA Q K+ + FS++ + ++ + GG ++ +
Sbjct: 241 LNRLVDLKGARVEIRALILLPTRELAQQTLKQVQLFSQF-TYIKAGLVTGGEDFKEQAAM 299
Query: 595 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPH 774
L+ P +++GTPGR+L ILDE D+ML+ + D++ + + +
Sbjct: 300 LRKV-PDVLIGTPGRLLEQLNAGNLDLSHVQVMILDEADRMLD-MGFAEDMERLCKECEN 357
Query: 775 GKQVMMFSA 801
+Q ++FSA
Sbjct: 358 REQTLLFSA 366
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 98.3 bits (234), Expect = 2e-19
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 10/200 (5%)
Frame = +1
Query: 238 IHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL 417
I F D+ ++ +I+ ++ D G HP +Q +P A+ G DI+ QAK+G GKT F +
Sbjct: 34 IEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLGFGI 93
Query: 418 ATLQQL----EPSESHVYV------LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGG 567
LQ++ +P + V LV+ TRELA Q++K+ E ++ R++ +GG
Sbjct: 94 PALQRVVGRDDPGFDKLAVPGAPQALVIVPTRELAVQVAKDLENAAR-KRNARIATIYGG 152
Query: 568 MPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDV 747
+ + L+ IVVGTPGR++ ILDE D+ML+ L DV
Sbjct: 153 RAYEPQVDSLQKGV-EIVVGTPGRLIDLYKQKHLSLKNVKIVILDEADEMLD-LGFLPDV 210
Query: 748 QEIFRNPPHGKQVMMFSAXL 807
+ + P +Q ++FSA +
Sbjct: 211 ETLIAGTPAVRQTLLFSATM 230
>UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_112, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 754
Score = 98.3 bits (234), Expect = 2e-19
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 12/219 (5%)
Frame = +1
Query: 208 KKEVKGSYVSIHSSG-FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAK 384
++E KG SI S F + + P ++A+ G+ + VQ + + G D L +AK
Sbjct: 271 EEEEKGDEESILSQKRFDECGVSPLTVKALSSAGYVQMTRVQEATLDVCLEGKDALVKAK 330
Query: 385 SGMGKTAVFVLATLQQ-LEPSESH-------VYVLVMCHTRELAFQISKEYERFSKYMSG 540
+G GK+A F+L ++ L+ + S+ + VL++C TRE+A QI+ E KY G
Sbjct: 331 TGTGKSAAFLLPAIEAVLKATSSNRIQRVPPILVLILCPTREIASQIAAEANVMLKYHDG 390
Query: 541 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL---AXXXXXXXXXXXXXXFILDECD 711
+ V GG + D++ L++ I+V TPGR+L +LDE D
Sbjct: 391 IGVQTLIGGTRFKFDQKRLESDPCQIIVATPGRLLDHIENKGSFSVRLMGLKMLVLDEAD 450
Query: 712 KMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPV 828
+L+ L R+D+++I P +Q ++FSA + KE+R +
Sbjct: 451 HLLD-LGFRKDMEKIVDCLPRQRQSLLFSATVPKEVRRI 488
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 98.3 bits (234), Expect = 2e-19
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 4/188 (2%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIP--QAVLGMDILCQAKSGMGKTAVFVLATLQQLEP 441
L P +L+ + GF PSE+Q I + ++ QA+SG GKT F + L +++
Sbjct: 98 LPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSIGVLSKIDV 157
Query: 442 SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIV 621
S+ LV+ TRELA QI ++ + G+ +++F GG D + + PHI
Sbjct: 158 SQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQARAASHPHIC 217
Query: 622 VGTPGRILAXXXXXXXXXXXXXXFILDECDKMLES--LDMRRDVQEIFRNPPHGKQVMMF 795
+ TPGR L +LDE D+ML ++ D+ E F P Q+++F
Sbjct: 218 ICTPGRALDLIVSGHLRVQNFKMAVLDEADQMLSDNFIEQVNDIMEYF---PEDVQILLF 274
Query: 796 SAXLSKEI 819
SA +S+ I
Sbjct: 275 SATISQSI 282
>UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase RRP3 - Encephalitozoon cuniculi
Length = 400
Score = 98.3 bits (234), Expect = 2e-19
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D + +++ + G P+EVQ + IP + G D++ +++G GKT FVL +
Sbjct: 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH 62
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L Y LV+ TREL+ QI++ + F +G+RV + GG L P
Sbjct: 63 LLQKNRSFYCLVVAPTRELSSQIAECFNMFQ--ATGLRVCLLVGGANFNVQANQLSKR-P 119
Query: 613 HIVVGTPGRILA-XXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
H+VVGTPGRI F+LDE D+ E D D++ I + +Q +
Sbjct: 120 HVVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQ-DFVEDLETIIPSLREKRQTL 178
Query: 790 MFSAXLSKEIRPVCKNL 840
+F+A +S EI + ++
Sbjct: 179 LFTATMSDEISKLSSSI 195
>UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase mak5 - Schizosaccharomyces pombe (Fission
yeast)
Length = 648
Score = 98.3 bits (234), Expect = 2e-19
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 7/199 (3%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
S + F L PE+L ++ GF P +Q IP+A +G DI+ +A +G GKT F + L
Sbjct: 122 SAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPIL 181
Query: 427 QQL--EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
+ +V LV+ TRELA QI + +E K +RV GG+ +QK + +L
Sbjct: 182 EHCLRNVDAKYVQALVVAPTRELAHQICQHFE-LIKPSPNIRVMSITGGLAVQKQQRLLN 240
Query: 601 TACPHIVVGTPGRI--LAXXXXXXXXXXXXXXFILDECDKMLES--LDMRRDVQEIFRNP 768
PH+VV TPGR+ + +LDE D++L+ + + EI NP
Sbjct: 241 KH-PHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNP 299
Query: 769 PH-GKQVMMFSAXLSKEIR 822
H +Q +FSA + ++
Sbjct: 300 MHTQRQTFIFSATFDEGLQ 318
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 97.9 bits (233), Expect = 3e-19
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L +I+ ++ G+E+P+ +Q IP + G D+L QA++G GKTA F L +
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 433 LE--PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
++ + VLV+ TRELA Q+++++E F+K + + V+ +GG LK
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
+VVGT GR++ +LDE D+ML + DV+ + + Q
Sbjct: 129 V-KVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLR-MGFIDDVKFVLSHVSDECQR 186
Query: 787 MMFSAXLSKEIRPV 828
++FSA + +I +
Sbjct: 187 LLFSATIPTDIADI 200
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 97.9 bits (233), Expect = 3e-19
Identities = 56/191 (29%), Positives = 98/191 (51%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
S F D+ L E+L++I FE P++VQ + IP + DI+ ++++G GKTA F +
Sbjct: 4 SNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPIC 63
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
Q ++ E+ LV+ TRELA Q+ ++ ++ ++V+ +G P E+ LK
Sbjct: 64 QLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRF-KRLKVAAVYGKAPFYHQEKELKQK 122
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
H+VVGTPGRI+ ++DE D+M ++ ++ I ++ +
Sbjct: 123 -THVVVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMF-NMGFVDQIETIIKDLSKKRVT 180
Query: 787 MMFSAXLSKEI 819
M+ SA + I
Sbjct: 181 MLLSATMPSAI 191
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 97.9 bits (233), Expect = 3e-19
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 1/203 (0%)
Frame = +1
Query: 232 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGM-DILCQAKSGMGKTAV 408
+SIH F D + + + + D P+E+Q + IP + DI+ AK+G GKTA
Sbjct: 1 MSIH---FSDLGINLALQQRLNDLKIITPTEIQEKVIPIVLNDKEDIVALAKTGTGKTAA 57
Query: 409 FVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
F L LQ ++ + + +++ TREL QI+ F+++ S V ++ GG+PI+
Sbjct: 58 FGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQVSIATLCGGIPIKPQI 117
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNP 768
E LK A HI+V TPGR+ FILDE D+M+ +L + + I +
Sbjct: 118 ERLKEA-THIIVATPGRLADLVKREAIDIKSISYFILDEADEMVTAL--KEGLDSIIKEI 174
Query: 769 PHGKQVMMFSAXLSKEIRPVCKN 837
P ++ +F+A L ++ + +N
Sbjct: 175 PKARRTFLFTATLPGTLKQLIQN 197
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 97.9 bits (233), Expect = 3e-19
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 447
L P + A + G++ VQ +P G D++ Q+++G GKT F+L L++L+P+E
Sbjct: 44 LAPRLQEACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAE 103
Query: 448 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 627
+ LV+ TRELA Q+ E + +G+RV+ +GG+ K + L+ H VVG
Sbjct: 104 ASTQALVLVPTRELALQVEHEARTLFE-GTGLRVAAVYGGVGYGKQNDALREGA-HFVVG 161
Query: 628 TPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK-QVMMFSA 801
TPGR+L DE D+ML S+ D++EI R P + +FSA
Sbjct: 162 TPGRVLDHLLRRTMQLDRLRALTFDEADRML-SIGFYPDMKEIQRYLPKRRIATCLFSA 219
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 97.9 bits (233), Expect = 3e-19
Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 3/188 (1%)
Frame = +1
Query: 268 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--EP 441
L IL AI +CG+ ++VQ + IP A+ G DI+ A++G GKTA F L L+QL +P
Sbjct: 29 LSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQLSKQP 88
Query: 442 SESHVY-VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 618
++ + LVM TRELA Q+ +++S+++ ++ +GG + + ++ I
Sbjct: 89 NDKPLLRALVMTPTRELAIQVCANIQKYSQFLP-LKTLAVYGGANMNPQRKGVEQGV-DI 146
Query: 619 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFS 798
+V TPGR+ ++DE D+ML+ L RD++++ R Q M+FS
Sbjct: 147 LVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLD-LGFVRDIEKVKRLIATEHQTMLFS 205
Query: 799 AXLSKEIR 822
A S ++
Sbjct: 206 ATYSDAVK 213
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 97.9 bits (233), Expect = 3e-19
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Frame = +1
Query: 217 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 396
+K + + F+D LK ++L + D G+EHPS +Q + IP A+ DIL ++K+G G
Sbjct: 5 IKNNLYENENLKFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTG 64
Query: 397 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 576
KT F++ LQ + + +++ TRELA QIS + SKYM + + V G+
Sbjct: 65 KTLSFLIPILQNIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQV--TGVDS 122
Query: 577 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML--ESLDMRRDVQ 750
+ D+ + +I++GTPG+I +LDE DK+L E D +
Sbjct: 123 KIDKNNIDF---NILLGTPGKIY-DCLCKNEVNKTCKTLVLDEADKLLSGEVYDTTLKIL 178
Query: 751 EIFRNPPHGKQVMMFSAXLSKEIRPVCK 834
++N Q+M+FSA I+ + K
Sbjct: 179 NHYKNKI--SQIMLFSATFPYHIQNIKK 204
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 97.9 bits (233), Expect = 3e-19
Identities = 55/170 (32%), Positives = 91/170 (53%)
Frame = +1
Query: 310 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTREL 489
E VQ + IP +LG D+L QAKSG GKT VF + ++ L+ ++ +++ TRE+
Sbjct: 35 EKLKSVQAKAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDLKAHYIQKVIITPTREI 94
Query: 490 AFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXX 669
+ QI + + + +G R SV+ GG+ + + LK P IV+GTPGR+
Sbjct: 95 STQIKETVRKLTP--AGARTSVYTGGIGHKLNVIDLKKTRPQIVIGTPGRVAQLIRMGAM 152
Query: 670 XXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEI 819
F+LDE DK+++ + + D+ I + P +QV +FSA + +
Sbjct: 153 DISHVDFFVLDEADKLMDEV-FKPDINTIINSLPPIRQVAVFSATYPRNL 201
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 97.9 bits (233), Expect = 3e-19
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 1/195 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D + E+ RA + G++ P+++Q E IP A+ G DI+ A++G GKTA F + LQ+
Sbjct: 43 FEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQK 102
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 612
L ++ L++ TREL+ QI ++ + G+ V + GG+ + L P
Sbjct: 103 LLEKPQRLFSLILAPTRELSLQIKEQLISLGSEI-GLDVCLILGGLDMVSQALQLSKK-P 160
Query: 613 HIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
HI+VG+PGRI + +LDE DK+L S D + +I + P K
Sbjct: 161 HIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLL-STDFDDSLNKIITSLPKDKVTY 219
Query: 790 MFSAXLSKEIRPVCK 834
++SA ++ +I + K
Sbjct: 220 LYSATMTSKITKLQK 234
>UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4;
Mollicutes|Rep: ATP-dependent RNA helicase - Mesoplasma
florum (Acholeplasma florum)
Length = 460
Score = 97.5 bits (232), Expect = 4e-19
Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF K I + + FE P+ +Q E IP +++ + +G GKT F+L L
Sbjct: 9 FSDFGFKKYINDTLKEINFETPTRIQAEIIPLIKKHQNVIALSHTGTGKTHAFLLPILNN 68
Query: 433 L--EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
L + + +V L++ TRELA QI + F+K + ++V +F GG I K E L
Sbjct: 69 LRFDQDKKNVQALIIAPTRELAKQIFDNVKPFTKNETQLKVDLFIGGEDINKQIESLNKR 128
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
P I VGTP RI I+DECD M+ L DV + +
Sbjct: 129 QPTIAVGTPTRIKELYEQNHLKATTSDYIIIDECD-MIFDLGFIEDVDFVVSKAKQNVNL 187
Query: 787 MMFSAXLSKEIRP 825
MFSA + +++RP
Sbjct: 188 SMFSATIPEQLRP 200
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 97.5 bits (232), Expect = 4e-19
Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 1/183 (0%)
Frame = +1
Query: 274 PEILRA-IVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSES 450
P+ LR + G+E ++VQ + +P A G D++ QA++G GKTA F L L++ +PS
Sbjct: 13 PDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILERCQPS-G 71
Query: 451 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 630
+ LV+ TRELA Q+++E+E + +G+ + +GG ++K + L I+VGT
Sbjct: 72 KLQALVLAPTRELANQVAQEFE-LLQGNAGLSIVTVYGGTDLEKQAKTLAKGV-DIIVGT 129
Query: 631 PGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLS 810
PGR++ LDE D+ML+ + D+ I +Q ++FSA
Sbjct: 130 PGRVMDMNERGHIDLNSPKMLCLDEADRMLD-MGFFPDIMWIVERMTSRQQTLLFSATFP 188
Query: 811 KEI 819
+EI
Sbjct: 189 QEI 191
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 97.5 bits (232), Expect = 4e-19
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L P L+A+ D G+ + +Q IP A+ G D+L A++G GKTA F L + +
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 433 LEPSESHVYV---LVMCHTRELAFQISKEYERFSKYMSGVRVS--VFFGGMPIQKDEEVL 597
L + + LV+ TRELA Q++ +E KY G ++S + GG+ E+ L
Sbjct: 64 LMNGRAKARMPRALVIAPTRELADQVASSFE---KYAKGTKLSWALLIGGVSFGDQEKKL 120
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
+++ TPGR+L ++DE D+ML+ + D++ IF+ P
Sbjct: 121 DRGV-DVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLD-MGFIPDIERIFKMTPPK 178
Query: 778 KQVMMFSAXLSKEIRPVCK 834
KQ + FSA + EI + K
Sbjct: 179 KQTLFFSATMPPEITRLTK 197
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 97.5 bits (232), Expect = 4e-19
Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L +L+A+ P+ VQ E +P G D++ +++G GKT F+L + +
Sbjct: 3 FDDMGLAAPLLQALNALNITAPTLVQQEVVPLGKDGGDLMVSSQTGSGKTFGFLLPVMHR 62
Query: 433 LEPSESHVY-------VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
+ E LV+C TRELA Q+S++ K+ GVRV+ GGMP K
Sbjct: 63 MMTGEQSPMEMLAGPECLVLCPTRELAQQVSQDAINLVKFTKGVRVATVVGGMPYGKQMA 122
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
L+ A IVVGTPGR+L I+DE D+ML+ L D++ I +
Sbjct: 123 SLRGA--RIVVGTPGRLLDLAQQGKLNLSTVTTLIVDEADRMLD-LGFSEDLEAIDQLCG 179
Query: 772 HGKQVMMFSAXLSKEIRPVCKNL 840
+ Q +MFSA +K I + +N+
Sbjct: 180 NRIQTLMFSATFAKRIIGLAENI 202
>UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1;
Erythrobacter sp. NAP1|Rep: Cold-shock dead-box protein
A - Erythrobacter sp. NAP1
Length = 598
Score = 97.5 bits (232), Expect = 4e-19
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 6/191 (3%)
Frame = +1
Query: 265 LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--- 435
+L P I A+ + G+ P+ VQ + G D++ A++G GKT F +A Q +
Sbjct: 5 ILPPAIGEALAERGYSEPTPVQAAAMAPDSAGRDLIVSAQTGSGKTVAFGIALAQDILDQ 64
Query: 436 ---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
P + VL + TRELA Q+S+E + +G+R++ GGM K+ L++
Sbjct: 65 ISGTPLQERPLVLAIAPTRELALQVSREL-GWLYAKAGLRIATCVGGMDASKERRALRSG 123
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
P IVVGTPGR+ +LDE D+ML+ + R D++EI P ++
Sbjct: 124 -PAIVVGTPGRLRDHLERGALDLSGLIGVVLDEADEMLD-MGFREDLEEILDATPDTRRT 181
Query: 787 MMFSAXLSKEI 819
++FSA + + I
Sbjct: 182 LLFSATMPQAI 192
>UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1;
Marinobacter sp. ELB17|Rep: ATP-dependent RNA helicase -
Marinobacter sp. ELB17
Length = 463
Score = 97.5 bits (232), Expect = 4e-19
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L + +AI GFE+ + +Q E +P + D++ QA++G GKTA F++ +Q
Sbjct: 44 FSDLNLDHRLQQAIAAIGFEYCTPIQAETLPWTLACQDLIGQAQTGTGKTAAFLITAIQT 103
Query: 433 L--EPSE------SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
+ P E S VL + TRELA QI+K+ E+ + +G +V GGM K
Sbjct: 104 MLETPIEDSKRFASEPRVLALAPTRELAMQIAKDAEQLCAH-TGHKVVTVVGGMHYDKQR 162
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFR-- 762
+ L+ I+V TPGR++ ILDE D+ML+ + DV+ I R
Sbjct: 163 DQLQNEVVDILVATPGRLIDFLGSQDVFLDQIDILILDEADRMLD-MGFIPDVKRIIRKC 221
Query: 763 NPPHGKQVMMFSAXLSKEI 819
P +Q ++FSA ++++
Sbjct: 222 TPKEDRQTLLFSATFNQDV 240
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 97.5 bits (232), Expect = 4e-19
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+D L E+ A D G++HP+ +Q I G D++ A++G GKT + L +
Sbjct: 55 FQDLGLCQELCAACADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLVNW 114
Query: 433 L--EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMP-IQKDEEVLKT 603
L + ++ VLVM TRELA Q++ ++ + + G+RV+ GG +++ E+ K
Sbjct: 115 LLAQRKTPYLSVLVMVPTRELAQQVTAQFVLLGRSV-GLRVATLVGGADMVEQACELSKR 173
Query: 604 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
PH+VVGTPGR+ +LDE DKML+ ++ +++ I P +
Sbjct: 174 --PHVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKMLD-MNYEKEIDAILEQLPQNR 230
Query: 781 QVMMFSAXLSKEI 819
+ M+FSA LS +I
Sbjct: 231 RTMLFSATLSTKI 243
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 97.5 bits (232), Expect = 4e-19
Identities = 58/184 (31%), Positives = 99/184 (53%)
Frame = +1
Query: 250 GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ 429
G+ L P +L+ I D G++ PS VQ IP + G ++L ++K+G GKTA +++ L
Sbjct: 109 GWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLN 168
Query: 430 QLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
+ SE + +++ RELA QIS+ +R S+ +GV + GG +Q D+ + +
Sbjct: 169 MINSSELSIQGIILVPIRELALQISRNVKRMSE-GTGVISAPVVGGTSMQ-DDIIRVSNG 226
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
H++VGTPGRI+ + DE DK+L+ + V ++ P KQ++
Sbjct: 227 VHVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLD-VTFGETVTKLLDLLPREKQML 285
Query: 790 MFSA 801
++SA
Sbjct: 286 LYSA 289
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 97.5 bits (232), Expect = 4e-19
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 2/205 (0%)
Frame = +1
Query: 211 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 390
+ KG + +S F+ L +LRAI GF+ P+ +Q + IP + G D++ A++G
Sbjct: 57 RRTKGKKGNGKASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTG 116
Query: 391 MGKTAVFVLATLQQLEP--SESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFG 564
GKTA FV+ ++ L+ + S+ L++ RELA Q K + FSK + +R G
Sbjct: 117 SGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSK-GTDLRSVAIVG 175
Query: 565 GMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRD 744
G+ +++ +L + P IVV TPGR L + DE D++ E +
Sbjct: 176 GVSLEEQFSLL-SGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFE-MGFAAQ 233
Query: 745 VQEIFRNPPHGKQVMMFSAXLSKEI 819
+ EI P +Q ++FSA L + +
Sbjct: 234 LTEILHALPTSRQTLLFSATLPRTL 258
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 97.1 bits (231), Expect = 5e-19
Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L +L+A+ F +P+ +Q IP A++G DI A +G GKTA ++L TL++
Sbjct: 156 FYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLER 215
Query: 433 L--EPSESHVY-VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L P + V VLV+ TREL Q+ + ++ S++ S V V + GG+ ++ E VL+
Sbjct: 216 LLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTS-VEVGLSVGGLDVKVQESVLRK 274
Query: 604 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
P IV+ TPGR++ ILDE D+ML+ ++ I R +
Sbjct: 275 N-PDIVIATPGRLIDHLANTPTFSLDTIEVLILDEADRMLDEY-FAEQMKHIVRQCARTR 332
Query: 781 QVMMFSAXLSKEIR 822
Q ++FSA +++E++
Sbjct: 333 QTILFSATMTEEVK 346
>UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2;
Bacillaceae|Rep: ATP-dependent RNA helicase -
Oceanobacillus iheyensis
Length = 432
Score = 97.1 bits (231), Expect = 5e-19
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F D L P + I F++P+E+Q + IP + G ++ Q+++G GKT F+L
Sbjct: 3 FEDLQLNPIVNDVIEQLKFKNPTEIQEKVIPAIIKGDSVVGQSRTGSGKTHAFLLPLFHG 62
Query: 433 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVR---VSVFFGGMPIQKDEEVLKT 603
LE + V ++ TRELA Q+ E + + GG QK E LKT
Sbjct: 63 LESDKKEVQFVITAPTRELATQLYGEVRNIITLADKTKEWNAKLLVGGTDKQKMTEKLKT 122
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQ 783
PHI+VGTPGRIL F++DE D ML+ L +V ++ Q
Sbjct: 123 P-PHIIVGTPGRILDLVKSGALSIYTAKSFVVDEADLMLD-LGFIEEVDQLLVRSKQDIQ 180
Query: 784 VMMFSAXLSKEIR 822
+++FSA + + ++
Sbjct: 181 LLVFSATIPQRLQ 193
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 97.1 bits (231), Expect = 5e-19
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
S F+ F L I+ + G++ P+ +Q ECIP + G D+L A++G GKTA F L +
Sbjct: 2 SEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPII 61
Query: 427 QQLEPSESHVYV-----LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
+ ++ + L++ TRELA QI + + +S + G++ V +GG+ Q +
Sbjct: 62 NKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGL-GLKTKVVYGGVGRQAQVD 120
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
++ I+V TPGR+L F+LDE D ML+ + +DVQ I P
Sbjct: 121 SIELGL-DILVATPGRLLDLIETGDINFKALEVFVLDEADTMLD-MGFFKDVQSIISKLP 178
Query: 772 HGKQVMMFSAXLSKEI 819
+Q ++FSA + EI
Sbjct: 179 KSRQTLLFSATMPAEI 194
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 97.1 bits (231), Expect = 5e-19
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F ++ EI RA+ + G P +Q +P A+ G D++ QA++GMGKT F + LQ+
Sbjct: 12 FASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFGVPLLQR 71
Query: 433 L----EPSESHV-YVLVMCHTRELAFQISKEYERFSKYMSG----VRVSVFFGGMPIQKD 585
+ E S + L++ TREL Q+ + +KY++ + V +GG P +
Sbjct: 72 VTTDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGDRKLSVVSIYGGRPYEPQ 131
Query: 586 EEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRN 765
E L+ +VVGTPGR+L +LDE D+ML+ L D++ I R
Sbjct: 132 IESLRKGA-DVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLD-LGFLPDIERILRQ 189
Query: 766 PPHGKQVMMFSAXLSKEI 819
P +Q M+FSA + I
Sbjct: 190 TPDTRQAMLFSATMPDPI 207
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 97.1 bits (231), Expect = 5e-19
Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F L +++A+ + G+ P+ +Q + IP + G ++L A++G GKTA FVL L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 433 LEPS----ESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
+ V +++ TRELA Q+ + +++KY+ + +GG+ ++ L
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLP-LTAMAMYGGVDAAPQKKRLI 121
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
++V TPGR+L +LDE D+ML+ + D+ I P +
Sbjct: 122 EGV-DLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLD-MGFIEDINSIIEKLPEQR 179
Query: 781 QVMMFSAXLSKEIRPVCKN 837
Q ++FSA LSK+++ + K+
Sbjct: 180 QNLLFSATLSKQVKALAKS 198
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 96.7 bits (230), Expect = 7e-19
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + + P++L AI + G+ + +Q + IP + G DI A++G GKT F++ +
Sbjct: 3 FEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVIHN 62
Query: 433 -LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTAC 609
L + LV+ TREL QI++E ++ K+ G+R GG + + L+
Sbjct: 63 ILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLE-GL 121
Query: 610 PHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVM 789
I+V TPGR++ F+LDE D+ML+ + +D++ + + KQ +
Sbjct: 122 NGIIVATPGRLIDMIKSGSIDISNVEFFVLDEADRMLD-MGFIQDIRWLLHKCKNRKQTL 180
Query: 790 MFSAXLSKEI 819
++SA LS E+
Sbjct: 181 LYSATLSVEV 190
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 96.7 bits (230), Expect = 7e-19
Identities = 60/197 (30%), Positives = 96/197 (48%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
+GF F L P IL+A+ F+ PS +Q E IP D++ +++G GKTA +
Sbjct: 15 NGFITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKKQDLIALSQTGSGKTATCAIPIC 74
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
++ + + L++ TRELA Q + E ++ KY GV+ FGG + LK
Sbjct: 75 NRVNTELTDIQALIIVPTRELALQYATETQKIGKY-KGVKAFAIFGGEDSALQQSKLKHG 133
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
++V TPGR++ ILDE D+ML S+ D+ I + H Q
Sbjct: 134 V-QVLVATPGRLIDFIYSRQIDLSHVETLILDEADEML-SMGFYDDLVFIIQCLNHSHQT 191
Query: 787 MMFSAXLSKEIRPVCKN 837
++FSA + I+ + K+
Sbjct: 192 LLFSATMPAAIQRLAKH 208
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 96.7 bits (230), Expect = 7e-19
Identities = 60/183 (32%), Positives = 92/183 (50%)
Frame = +1
Query: 259 DFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE 438
DF+ KP I A FE VQ + IP D+L +A +G GKT +V+ L+ ++
Sbjct: 2 DFM-KPFITEAWERARFEKMMPVQEQAIPLLRERKDVLVEAPTGTGKTLAYVIPALELID 60
Query: 439 PSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 618
+E H+ V++ TREL QI + + FS+ SG++ F GG+ +++ E LK P I
Sbjct: 61 ENEPHIQVVITAPTRELVMQIHQVIQLFSQ-GSGIKSGAFIGGVELKRQHERLKKK-PQI 118
Query: 619 VVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQVMMFS 798
+VGTPGR++ +LDE D++ ES M I + +Q+ S
Sbjct: 119 IVGTPGRLVELIDSKKMKMHKVKLIVLDEADQIYES-GMSASATRIANSALRDRQLAFIS 177
Query: 799 AXL 807
A L
Sbjct: 178 ATL 180
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 96.7 bits (230), Expect = 7e-19
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F+ F L IL+ I GF ++VQ + IP+A+ D++ A++G GKTA FV+ LQ
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 433 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
L + S L++ TRELA Q+ K+ + +K+ +G++ + GG K + L
Sbjct: 62 LLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKF-TGIQSGMITGGQEF-KFQAALFR 119
Query: 604 ACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK- 780
P I++ TPGR++ FILDE D+ML+ + DV I N GK
Sbjct: 120 KNPEIIIATPGRLIDHLKQKKDLMEDVEYFILDEADRMLD-MGFEEDVLTI-ANACSGKA 177
Query: 781 --QVMMFSAXLSKE-IRPVCKNL 840
Q ++FSA L + ++ V K +
Sbjct: 178 KPQTLLFSATLQQRGLKHVIKQI 200
>UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 48; n=2; Arabidopsis thaliana|Rep: Probable
DEAD-box ATP-dependent RNA helicase 48 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 798
Score = 96.7 bits (230), Expect = 7e-19
Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 13/219 (5%)
Frame = +1
Query: 211 KEVKGSYVSIHSSG-FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKS 387
+E + + SI+S+ F + + P L+A+ G + VQ + + + G D L +AK+
Sbjct: 315 EEKQEPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKT 374
Query: 388 GMGKTAVFVLATLQQLEPSESH---------VYVLVMCHTRELAFQISKEYERFSKYMSG 540
G GK+ F+L ++ + + + ++ L++C TRELA QI+ E + K+ G
Sbjct: 375 GTGKSMAFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDG 434
Query: 541 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL---AXXXXXXXXXXXXXXFILDECD 711
+ V GG + D++ L++ I++ TPGR+L FI+DE D
Sbjct: 435 IGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEAD 494
Query: 712 KMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLSKEIRPV 828
+L+ L RRDV++I P +Q ++FSA + KE+R V
Sbjct: 495 LLLD-LGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRV 532
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 96.7 bits (230), Expect = 7e-19
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Frame = +1
Query: 220 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 399
KG + ++D L P IL I CG++ P+ +Q + IP + DI+ A++G GK
Sbjct: 382 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 441
Query: 400 TAVFV---------LATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS 552
TA F+ L + ++E S+ Y +++ TRELA QI +E +F K + G+R
Sbjct: 442 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPL-GIRTV 500
Query: 553 VFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLD 732
GG+ + L+ C IV+ TPGR++ +LDE D+M++ +
Sbjct: 501 AVIGGISREDQGFRLRMGC-EIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMID-MG 558
Query: 733 MRRDVQEIFRNPPHGKQ 783
DVQ+I + P Q
Sbjct: 559 FEPDVQKILEHMPVSNQ 575
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 96.3 bits (229), Expect = 9e-19
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F F L P ++ A+ GF +P+ +Q + +P A+ G DIL A +G GKTA FVL L +
Sbjct: 58 FARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLHR 117
Query: 433 L----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
L E + + LV+ TREL QI +E + +++ +R + +GG+ + L+
Sbjct: 118 LLLQGESARGTLRALVVAPTRELVAQIHEEVKTLARFCR-LRSATVYGGVGMHAQTVQLR 176
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
T IV+ PGR+L +LDE D M + + DV+EI K
Sbjct: 177 TGV-DIVLACPGRLLDHVRRGHADLSHVDMLVLDEADMMFD-MGFLSDVREILHCTRVRK 234
Query: 781 QVMMFSAXLSKEIRPVCK 834
Q M+FSA + +R + +
Sbjct: 235 QTMLFSATMPAPLRELAE 252
>UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 430
Score = 96.3 bits (229), Expect = 9e-19
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F DF L P+++ A+ GF + + +Q +P + G D+ QA++G GKT F+ +T
Sbjct: 11 FSDFALHPQVIEALESKGFHYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70
Query: 433 L-------EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE 591
L E + L+M TRELA QI + E S +++G+++ + +GG K +
Sbjct: 71 LLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEALS-HLTGLKLGLAYGGDGYDKQLK 129
Query: 592 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
VL+ I+VGT GR++ +LDE D+M + L +D++ +FR P
Sbjct: 130 VLENGV-DILVGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYD-LGFIKDIRWLFRRMP 187
Query: 772 HGKQ--VMMFSAXLSKEIR 822
Q M+FSA LS +R
Sbjct: 188 ATSQRLNMLFSATLSYRVR 206
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 95.9 bits (228), Expect = 1e-18
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
S+ F F L + RA+ P+ +Q IP A+ G D+L A++G GKTA F L
Sbjct: 3 STTFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPL 62
Query: 424 LQQL-----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE 588
L L +P+ L++ TRELA QI++ S+ + + V FGG+ ++
Sbjct: 63 LHHLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEG-TPISHCVVFGGVSVRPQI 121
Query: 589 EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNP 768
+ L I+V TPGR+L ILDE D+ML+ + RDV +I
Sbjct: 122 QALARGVD-ILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLD-MGFVRDVMKIVGKC 179
Query: 769 PHGKQVMMFSAXLSKEIRPVCKNL 840
P +Q MMFSA + K I + K +
Sbjct: 180 PDDRQSMMFSATMPKPIEDLSKKI 203
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 95.9 bits (228), Expect = 1e-18
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 6/214 (2%)
Frame = +1
Query: 187 GSTEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMD 366
G E A K KG + + F + L + RA G++ P+ +Q IP A+ G D
Sbjct: 129 GFQERAVVKGAKGD-TTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRD 187
Query: 367 ILCQAKSGMGKTAVFVLATLQQL-----EPSESHVYVLVMCHTRELAFQISKEYERFSKY 531
+ +A +G GKTA F+L L+++ P+ + +VLV+ TRELA Q+ + E +++
Sbjct: 188 VCGRAVTGSGKTAAFMLPQLERMLHRGPRPAAA-THVLVLVPTRELAVQVHQMTESLAQF 246
Query: 532 MSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDEC 708
+ +R + GG+ L+T P IVV TPGR++ ILDE
Sbjct: 247 TT-IRAVLVVGGLSANVQAAALRTR-PEIVVATPGRVIDHVRNTHSFGLEDLATLILDEA 304
Query: 709 DKMLESLDMRRDVQEIFRNPPHGKQVMMFSAXLS 810
D++LE + +++EI R P +Q ++FSA L+
Sbjct: 305 DRLLE-MGFLEEIKEIVRQCPKKRQTLLFSATLT 337
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 95.9 bits (228), Expect = 1e-18
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 3/200 (1%)
Frame = +1
Query: 244 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 423
S F L E+ ++ G++ P+ +Q E +P A+ G DI+ A++G GKTA F L
Sbjct: 50 SPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPI 109
Query: 424 LQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 603
LQ+L Y L++ TREL QIS++ + GV V GG+ + +
Sbjct: 110 LQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTL-GVTVVTLVGGLD-HNTQAIALA 167
Query: 604 ACPHIVVGTPGRIL-AXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRN--PPH 774
PH+VVG+PGR++ +LDE D++L SLD +Q + + P
Sbjct: 168 KKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLL-SLDFDAALQVLLEHVGSPA 226
Query: 775 GKQVMMFSAXLSKEIRPVCK 834
+Q M+FSA ++ ++ + K
Sbjct: 227 ERQTMLFSATMTTKVSKLQK 246
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 95.5 bits (227), Expect = 2e-18
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 432
F + L I +AI D GFE P+E+Q + IP A+ G D+L A +G GKT F +Q
Sbjct: 19 FAELDLDFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAVQH 78
Query: 433 L----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 600
+ E S + VL++ +RELA QI E+ +K+ + ++ + GG P ++ L
Sbjct: 79 ILDRDEQSTTAPKVLILAPSRELARQIFNVVEQLTKH-TRIQSHLIIGGTPYGMQQQQLS 137
Query: 601 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGK 780
C I+V TPGR++ F++DE D+ML+ + + I + P
Sbjct: 138 EPC-DILVATPGRLVELDEKQWLDLTDVSYFVIDEADRMLD-MGFVSAINCIAKELPKEH 195
Query: 781 QVMMFSAXLSKE 816
Q +MFSA L E
Sbjct: 196 QTLMFSATLEGE 207
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 95.5 bits (227), Expect = 2e-18
Identities = 57/198 (28%), Positives = 100/198 (50%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
+ F L ++R + + G+E+ + +Q + I + G D+L + +G GKT F++ +
Sbjct: 55 TSFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPII 114
Query: 427 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTA 606
+ + L++ TRELA QI +E++ SK M + + F GG I D +VL
Sbjct: 115 EHALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMR-LHSATFIGGTNINTDMKVLSRK 173
Query: 607 CPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHGKQV 786
H++VGTPGR+L +LDE D+ML+ + DV+++ +Q
Sbjct: 174 L-HVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLD-MGFVNDVKKLVGGMTQREQT 231
Query: 787 MMFSAXLSKEIRPVCKNL 840
M+FSA L + + ++L
Sbjct: 232 MLFSATLEPNQKNLIQSL 249
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 95.5 bits (227), Expect = 2e-18
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
Frame = +1
Query: 253 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLA---- 420
F D +I+ AI +E P+ +Q + +P + G D++ AK+G GKTA FVL
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289
Query: 421 TLQQLEPSESHVYVLVMC-HTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 597
+ Q E + V+C TRELA QI E ++FSK G+RVS +GGM + + L
Sbjct: 290 IMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSK-AYGLRVSAVYGGMSKHEQFKEL 348
Query: 598 KTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPPHG 777
K C IVV TPGR++ +LDE D+M + L V+ I
Sbjct: 349 KAGC-EIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD-LGFEPQVRSIVGQIRPD 406
Query: 778 KQVMMFSAXLSKEIRPVCKNL 840
+Q ++FSA + ++ + + +
Sbjct: 407 RQTLLFSATMPWKVEKLAREI 427
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 95.1 bits (226), Expect = 2e-18
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 5/201 (2%)
Frame = +1
Query: 247 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 426
+ F D L P+ L+ + +CG+ P+++Q E I + G DIL A++G GKT F++ L
Sbjct: 51 NSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPIL 110
Query: 427 QQLEPSE----SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 594
++L + + LV+ TRELA+QI +E R ++ + GG + K E
Sbjct: 111 ERLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHE-FSAGLIIGGKDL-KFERN 168
Query: 595 LKTACPHIVVGTPGRILA-XXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRNPP 771
C +IV+GTPGRIL +LDE D+ L+ + + + I N P
Sbjct: 169 RMDQC-NIVIGTPGRILQHMDENPLFDCVNMEILVLDEADRCLD-MGFEQTMNAIVANLP 226
Query: 772 HGKQVMMFSAXLSKEIRPVCK 834
+Q ++FSA +K +R + +
Sbjct: 227 AKRQTLLFSATQTKSVRDLAR 247
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,739,621
Number of Sequences: 1657284
Number of extensions: 16176757
Number of successful extensions: 39969
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 37896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39118
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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