Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_L02
(1230 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.009
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.035
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.035
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.19
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.33
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.00
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.7
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 26 1.9
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 3.1
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 4.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.009
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXP--PXNPXPXXXPXXGXA--XXXPXXXP 1181
P PPP P G PPP A P P P P P P + P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 1182 PRVGXXXPPXXXP 1220
P + PP P
Sbjct: 421 PSLPPSAPPSLPP 433
Score = 29.9 bits (64), Expect = 0.76
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +3
Query: 1017 GSPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXNPXPXXXPXXGXAXXXPXXXPP 1184
G PP G PPP PP + P PP P A PP
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +2
Query: 1037 GTPXXTXPAPPXPPPCXXXPXNXPTPGXPXXXXPPPXGXRXPXPXXXXAPXGGPXXP 1207
GTP T APP PP P + P P P P P +P P P
Sbjct: 222 GTPTSTS-APPIPPSI---PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXNPXP 1130
P S PP P P PP PP + +P P P P
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSP-PNSPPRP 274
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXNPXP 1130
P +PP P P P P P PP P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 26.6 bits (56), Expect = 7.0
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 2/70 (2%)
Frame = +2
Query: 995 APRXXXPGIAAPXXGTPXXTXPAPPXPPPC--XXXPXNXPTPGXPXXXXPPPXGXRXPXP 1168
A R P + P P PP PP P P P P P G P
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Query: 1169 XXXXAPXGGP 1198
AP P
Sbjct: 469 LPPAAPAPPP 478
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.035
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 1020 SPPPXXGPXXGXPPPPXXPPLARXXPXTPXPP 1115
+PPP P PPPP PP+ P P PP
Sbjct: 1706 TPPP---PPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 33.5 bits (73), Expect = 0.061
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 1013 PGIAAPXXGTPXXTXPAPPXPPPCXXXPXNXPTPGXPXXXXP--PPXGXR 1156
P ++AP P + P PP PP P + P P P P P G R
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 30.7 bits (66), Expect = 0.43
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 1013 PGIAAPXXGTPXXTXPAPPXPPPCXXXPXN-XPTPGXPXXXXPPP 1144
P + P + P PP PP P + P P P PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.035
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 1023 PPPXXGPXXGXPPPPXXPP-LARXXPXTPXPP 1115
P P P G PPPP PP +A P P PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 32.7 bits (71), Expect = 0.11
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +2
Query: 1061 APPXPPPCXXXPXNXPTPGXPXXXXPPPXGXRXPXPXXXXAPXGGPXXPXGXXP 1222
+PP PPP P P P P P G P P GP P P
Sbjct: 731 SPPPPPPAVIVPTPAPAP-IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.57
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLA 1085
P PPP G PPPP PP A
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 27.5 bits (58), Expect = 4.0
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +3
Query: 1020 SPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXNPXPXXXPXXGXAXXXPXXXPP 1184
SPPP P P P+ P PP P P P A P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP---PGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +2
Query: 995 APRXXXPGIAAPXXGTPXXTX-PAPPXPPPCXXXPXNXPTPGXPXXXXPPP 1144
+P P + P TP P PP P P P PG PPP
Sbjct: 731 SPPPPPPAVIVP---TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXP--XTPXPPXNPXP 1130
P PPP PPPP P ++ P P P P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.19
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = +2
Query: 995 APRXXXPGIAAPXXGTPXXTXP--APPXPPPCXXXPXNXPTPGXPXXXXPPPXGXRXPXP 1168
AP P + P G P P APP P P P P P P P P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Query: 1169 XXXXAPXGGP 1198
P P
Sbjct: 1233 TAKAPPVPAP 1242
Score = 31.5 bits (68), Expect = 0.25
Identities = 37/145 (25%), Positives = 38/145 (26%), Gaps = 7/145 (4%)
Frame = +2
Query: 785 PGTXXPRGAXGXPXXRGXNXGPNPX------KXPLXXXXPXXAPXGAXXQXPXPRXXXXX 946
P P GA P G P P P P AP GA P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP-VPKPSVAAPP 1132
Query: 947 XXXXXXXXXXXXXXXXAPRXXXPGIAAPXXGTPXXTXPAPPXPPPCXXXPXNXPTPGXPX 1126
AP P A P P + APP P P P P P
Sbjct: 1133 VPVPSGAPPVPKPSVAAPPVPAPSGAPP---VPKPSVAAPPVPAPSSGIPP-VPKPAAGV 1188
Query: 1127 XXXPPP-XGXRXPXPXXXXAPXGGP 1198
PPP P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 30.7 bits (66), Expect = 0.43
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Frame = +2
Query: 995 APRXXXPGIAAPXXGTPXXTXPA--PPXPPPCXXXPXNXPTPGXPXXXXPPPXGXRXPXP 1168
AP P I AP G P P+ PP P P P P P P P G P P
Sbjct: 1068 APSSEIPSIPAP-SGAPPVPAPSGIPPVPKPSVAAPP-VPKPSVAVPPVPAPSG-APPVP 1124
Query: 1169 XXXXAPXGGPXXPXGXXP 1222
A P P G P
Sbjct: 1125 KPSVAAPPVP-VPSGAPP 1141
Score = 30.7 bits (66), Expect = 0.43
Identities = 25/108 (23%), Positives = 27/108 (25%)
Frame = +2
Query: 845 GPNPXKXPLXXXXPXXAPXGAXXQXPXPRXXXXXXXXXXXXXXXXXXXXXAPRXXXPGIA 1024
G P P P AP GA P P A
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 1025 APXXGTPXXTXPAPPXPPPCXXXPXNXPTPGXPXXXXPPPXGXRXPXP 1168
P P + PP PPP P P+ G P P P P
Sbjct: 1198 PP---VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 29.9 bits (64), Expect = 0.76
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +2
Query: 1013 PGIAAPXXGTPXXTXP--APPXPPPCXXXPXNXPTPGXPXXXXPPPXGXRXPXPXXXXAP 1186
P + AP P P APP P P P P P P P P P AP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPP--VPKPSVAAPPVPKPSVAVPPVP----AP 1117
Query: 1187 XGGPXXP 1207
G P P
Sbjct: 1118 SGAPPVP 1124
Score = 27.5 bits (58), Expect = 4.0
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = +2
Query: 995 APRXXXPGIAAPXXGTPXXTXPAPPXPPPCXXXPXNXPTPGXPXXXXPPPXGXRXPXPXX 1174
AP P A P P T P P P P P P P G P P
Sbjct: 1031 APPIPVPSTAPPVP-IPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG-APPVP-- 1086
Query: 1175 XXAPXGGPXXP 1207
AP G P P
Sbjct: 1087 --APSGIPPVP 1095
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/57 (26%), Positives = 17/57 (29%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXNPXPXXXPXXGXAXXXPXXXPP 1184
P S P P P P L+ P P P + P P P PP
Sbjct: 995 PLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPP 1051
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.33
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 1022 AAPXXGTPXXTXPAPPXPPPCXXXPXNXPTPGXPXXXXPPPXGXRXPXPXXXXAPXGGP 1198
+AP TP P PP P P P PP P P AP P
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXNPXP 1130
P S PP P PP P L P P PP P P
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVP--PMPPKVPPP 204
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 1.00
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 998 PRXXXPGIAAPXXGTPXXTXPAPPXPPP 1081
P P AAP P P PP PPP
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = -1
Query: 1221 GXXPXGXXGPPXGAXXXXGXGXRXPXG---GGXXXXGXPGVGXXXGXXXQGGGXGGAG 1057
G G GPP G G G G GG G G G GGG GG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXP 1112
PG+PPP PPP P L P P
Sbjct: 348 PGAPPPWLFAMQRYGPPPSYPDLKIPGVNCPIP 380
Score = 21.0 bits (42), Expect(2) = 1.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 900 LGLXPXAPPP 929
LG+ P APPP
Sbjct: 344 LGIAPGAPPP 353
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPP--PPXXPP 1079
PG+PPP P PP PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 1050 GXPPPPXXPPLARXXPXTPXPPXNP 1124
G PPPP PP P P PP P
Sbjct: 7 GNPPPPPPPP-GFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXN 1121
P PPP P PPPP + + TP N
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSGN 46
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXNPXP 1130
P P P P G PP P P P P P P P
Sbjct: 110 PNEPVPEE-PLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXNPXPXXXP 1142
P P P P P PP A P P P P P
Sbjct: 512 PSVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVP 554
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 1014 PGSPPPXXGPXXGXPPPPXXPPLARXXPXTPXPPXNPXPXXXP 1142
P P P P P PP+A P P P P P
Sbjct: 587 PSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVP 629
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,984,552
Number of Sequences: 5004
Number of extensions: 22659
Number of successful extensions: 246
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 667380970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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