Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_L01
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 29 3.4
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 29 3.4
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 29 3.4
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 29 3.4
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 29 5.9
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 29 5.9
U80029-7|ABC71799.1| 201|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41748-2|AAM51524.1| 639|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41748-1|AAA83335.3| 696|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 251 RFVSDDSQRFIQYIQRFVIQYGQWAAHGHFGKE 153
+F + S F++ ++F IQYG + +G+ GK+
Sbjct: 116 KFDTTKSTTFVKETRKFSIQYGSGSCNGYLGKD 148
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 251 RFVSDDSQRFIQYIQRFVIQYGQWAAHGHFGKE 153
+F + S F++ ++F IQYG + +G+ GK+
Sbjct: 115 KFDTTKSTTFVKETRKFSIQYGSGSCNGYLGKD 147
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 251 RFVSDDSQRFIQYIQRFVIQYGQWAAHGHFGKE 153
+F + S F++ ++F IQYG + +G+ GK+
Sbjct: 116 KFDTTKSTTFVKETRKFSIQYGSGSCNGYLGKD 148
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 251 RFVSDDSQRFIQYIQRFVIQYGQWAAHGHFGKE 153
+F + S F++ ++F IQYG + +G+ GK+
Sbjct: 116 KFDTTKSTTFVKETRKFSIQYGSGSCNGYLGKD 148
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 28.7 bits (61), Expect = 5.9
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Frame = +3
Query: 228 LGIIGDKPVSGALSTLGLRXGQSAXHAGLIPGLTSASGSLDNL-GLNDLSEALGLNSGIS 404
+G GD S + S R QS+ AGL+ T+ +G++DN+ G + + +
Sbjct: 354 IGRAGDSASSRSASLTSFRSMQSSGGAGLLVS-TNTTGAMDNVHGSSGYGNGSSSTTSSA 412
Query: 405 SLQDP----HLLSKPLNALGVLTSKGQKVPD--AIGLEPKPGP 515
+ P L S + +G + S G AI + P P P
Sbjct: 413 RRRPPIPSQMLSSTSTSGVGTMPSHGSVGASITAIAVNPTPSP 455
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 28.7 bits (61), Expect = 5.9
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Frame = +3
Query: 228 LGIIGDKPVSGALSTLGLRXGQSAXHAGLIPGLTSASGSLDNL-GLNDLSEALGLNSGIS 404
+G GD S + S R QS+ AGL+ T+ +G++DN+ G + + +
Sbjct: 354 IGRAGDSASSRSASLTSFRSMQSSGGAGLLVS-TNTTGAMDNVHGSSGYGNGSSSTTSSA 412
Query: 405 SLQDP----HLLSKPLNALGVLTSKGQKVPD--AIGLEPKPGP 515
+ P L S + +G + S G AI + P P P
Sbjct: 413 RRRPPIPSQMLSSTSTSGVGTMPSHGSVGASITAIAVNPTPSP 455
>U80029-7|ABC71799.1| 201|Caenorhabditis elegans Hypothetical
protein T20D4.10 protein.
Length = 201
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = +3
Query: 237 IGDKPVSGALSTLGLRXGQSAXHAGLIPGLTSASGSLDNLGLNDLSEALGLNSGISSLQD 416
+ K V+ G G+S I GL+ DNL +ND E D
Sbjct: 17 VAHKAVATGAEDAGCTDGESLRAFSCIMGLSDFIKKTDNLDMNDKKELKVFK------DD 70
Query: 417 PHLLSKPLNALGVLTSKGQKVPD 485
H + N + L + G+K+P+
Sbjct: 71 CHNVISCFNKIKCLGTDGEKIPE 93
>U41748-2|AAM51524.1| 639|Caenorhabditis elegans Hypothetical
protein C31H2.1b protein.
Length = 639
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 233 NHRRQTCQWSSKYLRS*XWPVCXSCRADTWPN*C 334
N R + K +R WPVC RA+ W C
Sbjct: 140 NKRLNRYEKVKKIIRRTDWPVCHEIRANLWKELC 173
>U41748-1|AAA83335.3| 696|Caenorhabditis elegans Hypothetical
protein C31H2.1a protein.
Length = 696
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 233 NHRRQTCQWSSKYLRS*XWPVCXSCRADTWPN*C 334
N R + K +R WPVC RA+ W C
Sbjct: 197 NKRLNRYEKVKKIIRRTDWPVCHEIRANLWKELC 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,610,515
Number of Sequences: 27780
Number of extensions: 337784
Number of successful extensions: 721
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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