Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K24
         (930 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915...    31   0.99 
03_05_0865 - 28365430-28367640                                         29   5.3  
01_06_0004 + 25507739-25508206,25509346-25509477,25509910-255100...    29   7.0  

>07_03_0699 +
           20772415-20773450,20789050-20789606,20790971-20791567,
           20792258-20792413
          Length = 781

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = +2

Query: 53  PHPTRGRSARPYSRPRPTRRAPAMFDVFGSVKGLLKLDSVCIDNNVFRLHYKATVIILI- 229
           PHP RGR   P    +P   APA     G + G+    +  +     R H +   +I + 
Sbjct: 140 PHPARGRGVHP---RQPIAVAPAARHGAGCLLGVTSNGNTALHLVASRGHAELAALIRVR 196

Query: 230 AFSLLVTSRQYIGDPIDC 283
           A SL+ T  + +  P+ C
Sbjct: 197 APSLVATRNRCLDTPLHC 214


>03_05_0865 - 28365430-28367640
          Length = 736

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = -3

Query: 403 PTPGLHVILSDAADKSVRDGESRVYPAVRVHNGERDFINDAVNRVTDVLSRRDEKRERDQ 224
           P P L     D++    RD   R     R  + +RD   D   R  D  SRRD  R+RD+
Sbjct: 52  PPPPLSNPPRDSSSSHHRDSSDRDRDRDRDRDRDRDRDRDRERRRDDD-SRRDRDRDRDR 110

Query: 223 D 221
           D
Sbjct: 111 D 111


>01_06_0004 +
           25507739-25508206,25509346-25509477,25509910-25510086,
           25510175-25510219,25510305-25510512,25510766-25510825,
           25510826-25511016,25511219-25511614
          Length = 558

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 53  PHPTRGRSARPYSRPRPTRRAPAMFDV--FGSVKGLLKLDSVCIDNNVFRLHYKA 211
           P P+ G+  +P SRP PT    A+F+V  FG+ KG    D V  D   F   + A
Sbjct: 115 PTPSCGKGNQPPSRPTPTSPQGAVFNVVDFGA-KG----DGVSDDTKAFEAAWAA 164


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,319,790
Number of Sequences: 37544
Number of extensions: 407675
Number of successful extensions: 1053
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)