Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_K24
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 53 3e-07
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 53 3e-07
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 50 2e-06
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 48 1e-05
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 48 1e-05
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 47 2e-05
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 46 3e-05
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 46 3e-05
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 46 3e-05
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 46 3e-05
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 44 2e-04
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 44 2e-04
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 43 4e-04
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 43 4e-04
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 42 8e-04
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 42 8e-04
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 38 0.008
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 38 0.008
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 35 0.072
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 35 0.072
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 35 0.072
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 35 0.072
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 35 0.095
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 31 0.89
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 31 0.89
AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 30 2.1
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 30 2.7
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 30 2.7
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 30 2.7
Z22179-4|CAA80161.1| 410|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVM----DTYCWIYSTFT 346
D+ V RLHY T +++ F++LV+++QY+G PI+C V M + YCW+ +T+
Sbjct: 25 DDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCWVQNTYW 84
Query: 347 IP 352
+P
Sbjct: 85 VP 86
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVM----DTYCWIYSTFT 346
D+ V RLHY T +++ F++LV+++QY+G PI+C V M + YCW+ +T+
Sbjct: 25 DDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCWVQNTYW 84
Query: 347 IP 352
+P
Sbjct: 85 VP 86
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVM----DTYCWIYSTFT 346
D+ V +L+Y T IL +F+LLV+++QY+G PI C V M + YCW+ +T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 347 IP 352
+P
Sbjct: 199 VP 200
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVM----DTYCWIYSTFT 346
D+ V +L+Y T IL +F+LLV+++QY+G PI C V M + YCW+ +T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 347 IP 352
+P
Sbjct: 199 VP 200
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD----EIPLAVMDTYCWIYSTFT 346
D+ V RL+Y T +IL L+++++QY G PI+C V+ E +++YCWI +T+
Sbjct: 21 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 80
Query: 347 IP 352
IP
Sbjct: 81 IP 82
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD----EIPLAVMDTYCWIYSTFT 346
D+ V RL+Y T +IL L+++++QY G PI+C V+ E +++YCWI +T+
Sbjct: 37 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 96
Query: 347 IP 352
IP
Sbjct: 97 IP 98
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEI---PL-AVMDTYCWIYSTFT 346
D+ + +L+Y T I+ F++LV+++QY+G PI C V P+ + YCW+ +T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 347 IP 352
+P
Sbjct: 81 LP 82
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEI---PL-AVMDTYCWIYSTFT 346
D+ + +L+Y T I+ F++LV+++QY+G PI C V P+ + YCW+ +T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 347 IP 352
+P
Sbjct: 81 LP 82
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFT 346
D+ V +L+Y T I+ AF+++V+++QY+G PI C V + + YCW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 347 IP 352
+P
Sbjct: 79 LP 80
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFT 346
D+ V +L+Y T I+ AF+++V+++QY+G PI C V + + YCW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 347 IP 352
+P
Sbjct: 79 LP 80
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFT 346
D+ V +L+Y T I+ AF+++V+++QY+G PI C V + + YCW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 347 IP 352
+P
Sbjct: 79 LP 80
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPL----AVMDTYCWIYSTFT 346
D ++ RL+Y T ILIAFSLL+ ++ Y+G+P+ C + ++YC+I +T+
Sbjct: 22 DTSIDRLNYVVTTSILIAFSLLLFAKNYVGEPMQCWTPNQFAGGWESFAESYCFIENTYF 81
Query: 347 IP 352
+P
Sbjct: 82 VP 83
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Frame = +2
Query: 128 DVFGSVKGLLK--LDSVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD-EI 298
++ GS+ ++K LD + D RL+Y + +I++ SL +T+RQY+G P+ C V +
Sbjct: 2 NMLGSMFSMVKPRLDDLGTD----RLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQF 57
Query: 299 PLA---VMDTYCWIYSTFTI-PN 355
A + YC++Y+T+ + PN
Sbjct: 58 TKAWEQYAEDYCFVYNTYWVKPN 80
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Frame = +2
Query: 128 DVFGSVKGLLK--LDSVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD-EI 298
++ GS+ ++K LD + D RL+Y + +I++ SL +T+RQY+G P+ C V +
Sbjct: 2 NMLGSMFSMVKPRLDDLGTD----RLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQF 57
Query: 299 PLA---VMDTYCWIYSTFTI-PN 355
A + YC++Y+T+ + PN
Sbjct: 58 TKAWEQYAEDYCFVYNTYWVKPN 80
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 44.0 bits (99), Expect = 2e-04
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +2
Query: 122 MFDVFGSVKGLLKLDSVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDC-IVDEI 298
MF + +KGL K D+++ RL+Y T ++L+ F+L ++++QY+G PI C I +
Sbjct: 1 MFFLDAFLKGLHKQGD---DDSIDRLNYYWTPMLLVIFALTLSAKQYVGQPIQCWIPAQF 57
Query: 299 PLA---VMDTYCWIYSTFTI-PNRLI 364
A + YC++ +T+ I P++ I
Sbjct: 58 TGAWEQYSENYCFVQNTYFISPDKYI 83
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 42.7 bits (96), Expect = 4e-04
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD-EIP---LAVMDTYCWIYSTFT 346
D+ V RL Y T +L FS++V+ +QY+G I C + E + YC+I +TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 347 IPNR--LIGRV-GKDYVQPGXXXXXXXXXXXXXXQILSGGFVWCNPXKQSCLMFPAYL 511
IP R + G V + + G ++W + KQ L FP+ +
Sbjct: 81 IPERSEIPGDVEDRQKAEIGYYQWVPIVLAIQAFMFYLPSWIWSSLYKQCGLDFPSVI 138
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 42.7 bits (96), Expect = 4e-04
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD-EIP---LAVMDTYCWIYSTFT 346
D+ V RL Y T +L FS++V+ +QY+G I C + E + YC+I +TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 347 IPNR--LIGRV-GKDYVQPGXXXXXXXXXXXXXXQILSGGFVWCNPXKQSCLMFPAYL 511
IP R + G V + + G ++W + KQ L FP+ +
Sbjct: 81 IPERSEIPGDVEDRQKAEIGYYQWVPIVLAIQAFMFYLPSWIWSSLYKQCGLDFPSVI 138
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 188 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLA----VMDTYCWIYSTFTIP 352
V RLH T +LI ++LV+ +Q+ G P++C+V +I + + YCW T+ +P
Sbjct: 22 VDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYVP 80
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 188 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLA----VMDTYCWIYSTFTIP 352
V RLH T +LI ++LV+ +Q+ G P++C+V +I + + YCW T+ +P
Sbjct: 22 VDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYVP 80
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +2
Query: 101 PTRRAPAMFDVFGSVKGLLKLDSVCIDNNVF-RLHYKATVIILIAFSLLVTSRQYIGDPI 277
P R P M VF + G L D+++F RLHY T L+ ++L++ + + G PI
Sbjct: 20 PGARVPRM--VFAEIVGTLSFLQPQADDDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPI 77
Query: 278 DC-IVDEIPLAVMD---TYCWIYSTF 343
+C + E + D YCW +T+
Sbjct: 78 ECWLPAEYKSSWEDYTEMYCWARNTY 103
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Frame = +2
Query: 194 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV-DEIPLA---VMDTYCWIYSTFTI 349
RL+Y T IL+AFS+L++ +Q+ G PI+C+ ++ P + + YCW T+ +
Sbjct: 25 RLNYLMTPNILLAFSVLISFKQFGGRPIECMFPNKFPGSWEQYAENYCWSQDTYFV 80
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +2
Query: 194 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFTIP 352
RL+ + TV+IL S L+ S +IGDPI C + + ++ YC+++ T+ +P
Sbjct: 29 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVP 85
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +2
Query: 194 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFTIP 352
RL+ + TV+IL S L+ S +IGDPI C + + ++ YC+++ T+ +P
Sbjct: 3 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVP 59
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 35.1 bits (77), Expect = 0.072
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 182 NNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY----CWIYSTFTI 349
+ + R++ T +L+A +L ++ +QY G PI C D Y C+I +T+ +
Sbjct: 26 DTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYVHDFCFIENTYFV 85
Query: 350 PN 355
PN
Sbjct: 86 PN 87
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 35.1 bits (77), Expect = 0.072
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 188 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLA-----VMDTYCWIYSTFTIP 352
V +L+Y AT I L+ S +T ++G PIDC +D YC++ +TF +P
Sbjct: 20 VDKLNYCATTIGLVLASAFITGWSFVGSPIDCWFPAYYKGWWAEYALD-YCYVQNTFFVP 78
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 35.1 bits (77), Expect = 0.072
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 182 NNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY----CWIYSTFTI 349
+ + R++ T +L+A +L ++ +QY G PI C D Y C+I +T+ +
Sbjct: 26 DTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYVHDFCFIENTYFV 85
Query: 350 PN 355
PN
Sbjct: 86 PN 87
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 35.1 bits (77), Expect = 0.072
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 179 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV 289
DN R+ + T+ ILI F LV+S G PI C++
Sbjct: 20 DNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLM 56
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 34.7 bits (76), Expect = 0.095
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +2
Query: 188 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFTIP 352
V +H T +L+ ++L++ +Q+ G PI+C+V + + YCW T+ IP
Sbjct: 22 VASIHSFLTSNLLVGLAVLISWKQFGGTPIECMVPLDFTSAWVQYSNNYCWAQPTYFIP 80
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 31.5 bits (68), Expect = 0.89
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 194 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIP--LAVMDTYCWIYSTF 343
RLH TV +L F LL ++Q+ G+PIDC++ D++ + +C Y TF
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTF 81
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 31.5 bits (68), Expect = 0.89
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 194 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIP--LAVMDTYCWIYSTF 343
RLH TV +L F LL ++Q+ G+PIDC++ D++ + +C Y TF
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTF 81
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 194 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFTIP 352
R Y+ T +L ++++ + QY+G PI C V +TYC+I T+ +P
Sbjct: 24 RFSYQYTSTLLGFSAIMMAASQYVGRPIQCWVPAQFTRTWEKYAETYCFIKGTYFLP 80
>AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform a
protein.
Length = 378
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -1
Query: 153 SPFTEPKTSNMAGARRVGRGREYGRALRPRVG 58
+P KT AG R GRGR G A RPR G
Sbjct: 57 APVAATKTDGAAGRGRGGRGRGRGGAGRPRDG 88
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 194 RLHYKATVIILIAFSLLVTSRQYIGDPIDC 283
RL Y TV +L + + + ++QY+G I C
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQC 52
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 194 RLHYKATVIILIAFSLLVTSRQYIGDPIDC 283
RL Y TV +L + + + ++QY+G I C
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQC 52
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 194 RLHYKATVIILIAFSLLVTSRQYIGDPIDC 283
RL Y TV +L + + + ++QY+G I C
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQC 52
>Z22179-4|CAA80161.1| 410|Caenorhabditis elegans Hypothetical
protein F58A4.4 protein.
Length = 410
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 183 LSMHTESSLRSPFT-EPKTSNMAGARRVGRGREYGRALRPRV 61
+S T L+SPF PKT N+A VG+ E+ + PR+
Sbjct: 318 VSTGTNHLLKSPFCIHPKTGNVAVPLNVGKIEEFDVSKCPRI 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,488,047
Number of Sequences: 27780
Number of extensions: 335620
Number of successful extensions: 865
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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