BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_K23
(1027 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 31 0.056
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 26 2.1
AY324308-1|AAQ89693.1| 134|Anopheles gambiae insulin-like pepti... 25 4.8
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 6.4
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 31.1 bits (67), Expect = 0.056
Identities = 31/106 (29%), Positives = 33/106 (31%), Gaps = 8/106 (7%)
Frame = +2
Query: 581 PPPPPXXAXXKNSXPX-------IXXGGXXPXXGIXKXFPGRFPPLXXXPPXPPPPFXXP 739
PPPPP N P + P FP FP L P P PP P
Sbjct: 531 PPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPP 590
Query: 740 CXXFTXXTLXPPFXPL-XGXXGAPFLXXPPXXXVFPXXXGXGXPPP 874
+ PP PL G G P PP P G G P
Sbjct: 591 --------MGPPPSPLAGGPLGGPAGSRPP----LPNLLGFGGAAP 624
Score = 24.6 bits (51), Expect = 4.8
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 6/62 (9%)
Frame = +2
Query: 572 PXXPPPPPXXAXXKN---SXPXIXXGGXXPXXGIXKXFPGRFPPLXXXPPXP---PPPFX 733
P PPPPP + P G P F G PP+ P P P P
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYPIIIPLPLP 641
Query: 734 XP 739
P
Sbjct: 642 IP 643
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 25.8 bits (54), Expect = 2.1
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = -2
Query: 825 GGXXRKGAPXXPXRGXKGGXRVXXVXXXQGXXKGGGGXGGXFXRG--GXRPGNXXKXPXX 652
GG G RG +GG R +G +GG GG F G G R G+ +
Sbjct: 59 GGDDGYGGGGRGGRGGRGGGR------GRGRGRGGRDGGGGFGGGGYGDRNGDGGRPAYS 112
Query: 651 GXXPP 637
G P
Sbjct: 113 GNSDP 117
>AY324308-1|AAQ89693.1| 134|Anopheles gambiae insulin-like peptide
2 precursor protein.
Length = 134
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 370 RXSASSLTDSLPPGXPXXGXRFH 438
+ ++L D+LPPG P G H
Sbjct: 83 KVEVATLPDTLPPGFPYPGAGVH 105
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.2 bits (50), Expect = 6.4
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -1
Query: 910 GGGXGKXXPPXXGGGXAXPPGXXENXXXGG 821
GGG P GGG + PG GG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,382
Number of Sequences: 2352
Number of extensions: 12516
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 113463324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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