Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_K20
         (859 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0386 - 2767806-2767955,2768150-2768239,2768317-2768373,276...    29   6.3  
03_02_0902 + 12278770-12281448                                         29   6.3  
05_02_0104 - 6638018-6638599,6639284-6639632,6641843-6642048           28   8.3  
02_04_0537 - 23734010-23734715,23735326-23735333                       28   8.3  
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906...    28   8.3  
01_06_0851 + 32455364-32458050,32458883-32458922                       28   8.3  

>06_01_0386 -
           2767806-2767955,2768150-2768239,2768317-2768373,
           2768477-2768533,2768610-2769389
          Length = 377

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/27 (51%), Positives = 21/27 (77%), Gaps = 4/27 (14%)
 Frame = +2

Query: 218 RSAASPLP*RGTGT----RRVDQRRRQ 286
           R+A +P+P RG+G+    RRVD+RRR+
Sbjct: 32  RAAPAPIPPRGSGSVATLRRVDRRRRR 58


>03_02_0902 + 12278770-12281448
          Length = 892

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 510 PVVGEETVLLXDCATEGSRPRTDSRRWTG 596
           P V  + +LL DC   G    TD R WTG
Sbjct: 39  PFVPRDNILL-DCGATGQANDTDGRLWTG 66


>05_02_0104 - 6638018-6638599,6639284-6639632,6641843-6642048
          Length = 378

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 138 LGSSALRARAAPGHTESDMSPAEGVLRDLL 227
           LG +A  A   P H E+  SP+ G  RD+L
Sbjct: 43  LGVAAAAAAPLPAHGEASPSPSYGSFRDIL 72


>02_04_0537 - 23734010-23734715,23735326-23735333
          Length = 237

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
 Frame = +1

Query: 442 SCSATTPCRPTSASCSRSTSVGI--------PSSARRQCCXRTARPRVHDPGPIRVGGLX 597
           S +A +P  P  AS +RS + G         P+S R     R++R R H P P+ V    
Sbjct: 96  SSAAISPSPPRRASPARSPTAGAAGGGGRRSPASPRTASSPRSSRARAH-PAPVSVAAPA 154

Query: 598 PPXXA 612
           P   A
Sbjct: 155 PAAAA 159


>01_06_0939 -
           33188620-33189252,33189570-33189680,33190460-33190668,
           33190781-33191078
          Length = 416

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 466 RPTSASCSRSTSVGIPSSARRQCCXRTARPRVHDPGPI 579
           RP +   S S S+  PS+ R      TA P +H PG +
Sbjct: 65  RPLAPGASASLSLSSPSTGRAVSVVVTAIPALHCPGSL 102


>01_06_0851 + 32455364-32458050,32458883-32458922
          Length = 908

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 501 GGNPVVGEETVLLXDCATEGSRPRTDSRRWTG 596
           G  P V  + +LL DC   G    TD R W+G
Sbjct: 40  GAGPFVPRDDILL-DCGATGKGNDTDGRVWSG 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,336,926
Number of Sequences: 37544
Number of extensions: 364356
Number of successful extensions: 1174
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)